CsaV3_2G004040 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G004040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pathogenesis-related protein PR-4-like
Location	chr2: 2091819 .. 2092545 (-)
RNA-Seq Expression	CsaV3_2G004040
Synteny	CsaV3_2G004040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTTGTGTTCATGTCTTGTAATGATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTATACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACCTGGGATGCAAATCAACCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTCTTGGACCTCTTGGCCAACACTCTTGTGGCCTATGTTTATTAGTATGTCTTCTCCCATCATTTCTTAATTGGATAGGTTCAACATCGGTTTGAAATGACTTTAAAATATCATACGTAAACATTTTAGAAGGGTATATTCAAATAGGATCGTTTAATGATTTATCCGTCTTTCAATCACTTTTTACCTTATCACTGCCAAACTTGCATTATATATCACAGAGTTTTTTTACCTTCGTCGTATTAAAAATTAGTTTTATCCACGAAGATAATATATCTCATTAAATTAATTATTTTGCATGTGTGTAGATGAAGTATGATATTAATTCGTTTGATGGCGAGAAAAAATAATTAAGACATGAATATGTAGGTGACTAACGTTCAAACAGGAGCTCAACAAACAGTGAGAATTGTTGATCAATGTAGTAATGGAGGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCATTGCTAATGGCTTTCTCACAATGAACTATGATTTTGTGAATTGTTGA

mRNA sequence

ATGTTGTTGTGTTCATGTCTTGTAATGATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTATACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACCTGGGATGCAAATCAACCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTCTTGGACCTCTTGGCCAACACTCTTGTGGCCTATGTTTATTAGTGACTAACGTTCAAACAGGAGCTCAACAAACAGTGAGAATTGTTGATCAATGTAGTAATGGAGGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCATTGCTAATGGCTTTCTCACAATGAACTATGATTTTGTGAATTGTTGA

Coding sequence (CDS)

ATGTTGTTGTGTTCATGTCTTGTAATGATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTATACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACCTGGGATGCAAATCAACCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTCTTGGACCTCTTGGCCAACACTCTTGTGGCCTATGTTTATTAGTGACTAACGTTCAAACAGGAGCTCAACAAACAGTGAGAATTGTTGATCAATGTAGTAATGGAGGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCATTGCTAATGGCTTTCTCACAATGAACTATGATTTTGTGAATTGTTGA

Protein sequence

MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYDFVNC*

Homology

[Close]

BLAST of CsaV3_2G004040 vs. NCBI nr
Match: KAE8651558.1 (hypothetical protein Csa_019464 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 1.9e-73
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT 60
           MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT
Sbjct: 1   MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT 60

Query: 61  AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA 120
           AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA
Sbjct: 61  AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA 120

Query: 121 NGFLTMNYDFVNC 134
           NGFLTMNYDFVNC
Sbjct: 121 NGFLTMNYDFVNC 133

[Close]

BLAST of CsaV3_2G004040 vs. NCBI nr
Match: XP_004139240.1 (pathogenesis-related protein PR-4 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 1.9e-73
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT 60
           MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT
Sbjct: 11  MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT 70

Query: 61  AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA 120
           AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA
Sbjct: 71  AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA 130

Query: 121 NGFLTMNYDFVNC 134
           NGFLTMNYDFVNC
Sbjct: 131 NGFLTMNYDFVNC 143

[Close]

BLAST of CsaV3_2G004040 vs. NCBI nr
Match: KAA0063600.1 (pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18427.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 8.3e-69
Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT 60
           MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWT
Sbjct: 11  MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWT 70

Query: 61  AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA 120
           AFCGP+GP GQ SCGLCLLVTNVQTG Q+TVRIVDQCSNGGLDLDVGVFQSLDTDGNG A
Sbjct: 71  AFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNA 130

Query: 121 NGFLTMNYDFVNC 134
           NGFLT+NYDFVNC
Sbjct: 131 NGFLTVNYDFVNC 143

[Close]

BLAST of CsaV3_2G004040 vs. NCBI nr
Match: XP_023545388.1 (pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 3.1e-63
Identity = 114/130 (87.69%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 4   CSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFC 63
           C CLVM+SKAQS SNVRATFN YNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFC
Sbjct: 6   CLCLVMLSKAQSASNVRATFNFYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFC 65

Query: 64  GPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGF 123
           GP+GP G+ SCGLCLLVTN +T AQQTVRIVDQC+NGGLDLDVGVFQSLDTDGNG ANGF
Sbjct: 66  GPVGPQGEDSCGLCLLVTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGF 125

Query: 124 LTMNYDFVNC 134
           LT+NYDFVNC
Sbjct: 126 LTINYDFVNC 135

[Close]

BLAST of CsaV3_2G004040 vs. NCBI nr
Match: KAG6599313.1 (Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.5 bits (641), Expect = 4.0e-63
Identity = 114/132 (86.36%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 2   LLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTA 61
           L C CLVM+SKAQS SNVRATFNLYNAP+INWD NAVSAFCSTWDA+QPLEWRSQYGWTA
Sbjct: 11  LSCLCLVMLSKAQSASNVRATFNLYNAPEINWDFNAVSAFCSTWDADQPLEWRSQYGWTA 70

Query: 62  FCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIAN 121
           FCGP+GP G+ SCGLCLLVTN +TGAQQTVRIVDQC+NGGLDLDVGVF+SLDTDGNG AN
Sbjct: 71  FCGPVGPQGEDSCGLCLLVTNTETGAQQTVRIVDQCNNGGLDLDVGVFRSLDTDGNGNAN 130

Query: 122 GFLTMNYDFVNC 134
           GFLT++YDFVNC
Sbjct: 131 GFLTVDYDFVNC 142

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-49
Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 0


Query: 1   MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT 60
           +L+ S ++ M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA++PL WR +YGWT
Sbjct: 13  LLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWT 72

Query: 61  AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA 120
           AFCGP GP GQ SCG CL VTN  TG Q TVRIVDQCSNGGLDLDV VF  LDT+G G  
Sbjct: 73  AFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNGVGYQ 132

Query: 121 NGFLTMNYDFVNC 134
            G LT+NY+FVNC
Sbjct: 133 QGHLTVNYEFVNC 145

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.0e-48
Identity = 87/133 (65.41%), Postives = 103/133 (77.44%), Query Frame = 0


Query: 1   MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT 60
           +L+ S ++ M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA++PL WR +YGWT
Sbjct: 13  LLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWT 72

Query: 61  AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA 120
           AFCGP GP GQ SCG CL VTN  TG Q TVRIVDQCSNGGLDLDV VF  LDT+G G  
Sbjct: 73  AFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNGLGYQ 132

Query: 121 NGFLTMNYDFVNC 134
            G L +NY+FVNC
Sbjct: 133 QGHLIVNYEFVNC 145

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.8e-48
Identity = 83/119 (69.75%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 15  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPLGQHSC 74
           S  NVRAT+++YN   + WDLNAVSA+CSTWDAN+PL WR +YGWTAFCGP+GP G+ SC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 75  GLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYDFVNC 134
           G CL VTN +TGAQ TVRIVDQCSNGGLDLDV VF+ +DTDGNG   G L +NY FV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 6.5e-48
Identity = 83/119 (69.75%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 15  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPLGQHSC 74
           S  NVRAT+++YN   + WDLNAVSA+CSTWDAN+P  WRS+YGWTAFCGP+GP G+ SC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 75  GLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYDFVNC 134
           G CL VTN +TGAQ TVRIVDQCSNGGLDLD+ VFQ +DTDG G   G L +NY FVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-46
Identity = 82/127 (64.57%), Postives = 98/127 (77.17%), Query Frame = 0


Query: 7   LVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPL 66
           ++ ++ AQS +NVRAT++LYN   INWDL   S +C+TWDA++PLEWR +YGWTAFCGP 
Sbjct: 17  MMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPA 76

Query: 67  GPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTM 126
           GP GQ SCG CL VTN  TG Q+TVRIVDQC NGGLDLDV VF  LDT+G G   G L +
Sbjct: 77  GPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNV 136

Query: 127 NYDFVNC 134
           NY+FVNC
Sbjct: 137 NYEFVNC 143

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy TrEMBL
Match: A0A5D3D4F5 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001530 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.0e-69
Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWT 60
           MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWT
Sbjct: 11  MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWT 70

Query: 61  AFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIA 120
           AFCGP+GP GQ SCGLCLLVTNVQTG Q+TVRIVDQCSNGGLDLDVGVFQSLDTDGNG A
Sbjct: 71  AFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNA 130

Query: 121 NGFLTMNYDFVNC 134
           NGFLT+NYDFVNC
Sbjct: 131 NGFLTVNYDFVNC 143

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy TrEMBL
Match: A0A0A0LG74 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010340 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 10  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 69
           MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL
Sbjct: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 60

Query: 70  GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD 129
           GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD
Sbjct: 61  GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD 120

Query: 130 FVNC 134
           FVNC
Sbjct: 121 FVNC 124

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy TrEMBL
Match: A0A6J1KG47 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493585 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 2   LLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTA 61
           L C CLVM+SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTA
Sbjct: 11  LSCLCLVMLSKAQSASNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTA 70

Query: 62  FCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIAN 121
           FCGP+GP GQ SCGLCLLVTN +TGAQQTVRIVDQC+NGGLDLDVGVFQSLDTDGNG AN
Sbjct: 71  FCGPVGPQGQDSCGLCLLVTNTETGAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNAN 130

Query: 122 GFLTMNYDFVNC 134
           GFL ++YDFV C
Sbjct: 131 GFLIVDYDFVKC 142

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy TrEMBL
Match: A0A6J1G2Y5 (pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC111450308 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 115/132 (87.12%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 2   LLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTA 61
           L C CLVM+SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTA
Sbjct: 11  LSCLCLVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTA 70

Query: 62  FCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIAN 121
           FCGP+GP G+ SCGLCLLVTN +TGAQQ VRIVDQC+NGGLDLDVGVFQSLDTDGNG AN
Sbjct: 71  FCGPVGPQGEDSCGLCLLVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNAN 130

Query: 122 GFLTMNYDFVNC 134
           GFLT++YDFVNC
Sbjct: 131 GFLTVDYDFVNC 142

[Close]

BLAST of CsaV3_2G004040 vs. ExPASy TrEMBL
Match: A0A6J1CMK0 (pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC111013008 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.7e-63
Identity = 115/134 (85.82%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 1   MLLCSCLVM-MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGW 60
           ++LC CLV+ +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWDANQPLEWRSQYGW
Sbjct: 12  IMLCCCLVIRVSEGQSGSNVRATYNLYNAPQINWDLNAVSAFCATWDANQPLEWRSQYGW 71

Query: 61  TAFCGPLGPLGQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGI 120
           TAFCGP+GP GQ SCG CLLVTN +TGAQQTVRIVDQCSNGGLDLDVGVFQSLDT+GNG 
Sbjct: 72  TAFCGPVGPHGQDSCGQCLLVTNTETGAQQTVRIVDQCSNGGLDLDVGVFQSLDTNGNGN 131

Query: 121 ANGFLTMNYDFVNC 134
           ANGFLT+NYDFVNC
Sbjct: 132 ANGFLTVNYDFVNC 145

[Close]

BLAST of CsaV3_2G004040 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-45
Identity = 79/120 (65.83%), Postives = 92/120 (76.67%), Query Frame = 0


Query: 14  QSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPLGQHS 73
           +S SNVRAT++ YN  Q NWDL AVSA+CSTWDA++P  WRS+YGWTAFCGP GP GQ S
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 74  CGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYDFVNC 133
           CG CL V N +T A  TVRIVDQCSNGGLDLDV +F  +DTDG G   G L ++Y FV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:

BLAST of CsaV3_2G004040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651558.1	1.9e-73	100.00	hypothetical protein Csa_019464 [Cucumis sativus]	[more]
XP_004139240.1	1.9e-73	100.00	pathogenesis-related protein PR-4 [Cucumis sativus]	[more]
KAA0063600.1	8.3e-69	93.98	pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18427.1 pa...	[more]
XP_023545388.1	3.1e-63	87.69	pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6599313.1	4.0e-63	86.36	Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsaV3_2G004040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29062	2.6e-49	66.17	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P29063	1.0e-48	65.41	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09761	3.8e-48	69.75	Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1	[more]
P09762	6.5e-48	69.75	Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1	[more]
P32045	1.2e-46	64.57	Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of CsaV3_2G004040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D4F5	4.0e-69	93.98	Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LG74	1.2e-68	100.00	Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010340 PE=4...	[more]
A0A6J1KG47	2.5e-63	87.12	pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935...	[more]
A0A6J1G2Y5	2.5e-63	87.12	pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1CMK0	5.7e-63	85.82	pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CsaV3_2G004040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04720.1	4.0e-45	65.83	pathogenesis-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 87..105 score: 87.72 coord: 49..67 score: 75.79 coord: 108..132 score: 52.8 coord: 68..86 score: 62.81
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 16..133 e-value: 7.1E-51 score: 171.1
IPR001153	Barwin domain	PROSITE	PS51174	BARWIN_3	coord: 14..133 score: 72.782547
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 14..133 e-value: 2.3E-50 score: 171.5
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 15..133
None	No IPR available	PANTHER	PTHR46351:SF6	PATHOGENESIS-RELATED PROTEIN PR-4A	coord: 2..133
IPR044301	Pathogenesis-related protein-4	PANTHER	PTHR46351	WOUND-INDUCED PROTEIN WIN2	coord: 2..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G004040.1	CsaV3_2G004040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
molecular_function	GO:0004540	ribonuclease activity