CsaV3_2G003000 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CACCTTCCTTAGAAAATCCCCTGTTATTCAAGACAATAAGAAAGCATAACCAATACTTACTACTGTTCAAACTGAAATATAAACCATTATTAAATTTGAGCCATTTCATTCGGTTTATGTATAGTAAATTGCACCTTCCCTAGAAAGTCTCCTGTTATGTATTATTCTAACTGAAATAGAAACCATATATTGACCGGCATCAATCAGGATGAATTGGAGCAAATGTTTAATACACTGAATCCTTCGACCAAATATAACTATCTATGCTGCCAACCGTATCAACATTTAAAAGAAAAGATTTAAACCATAGATGTTACTCTCCCTAGGTATTACTCTGTTAGGCAATGAACATAATTCAAAGCGGCCTCGATGCTCAAGTTATTGAAGAGAATGTCCAATTAAAAGTCTAATATCTTTAACTTTTAAGGTTTGTGTCTATTATAATGAAATACAACTGTCTACACTTGTAACCGAATCAACATTTAAGAGAAAATGATTTAAAACCATAGACAGGCTAGAACATGGAATTTTTTTTGACAGGTTTTTTTTTAAAACTACATATAGGCACCTTCAAGGTAAAGAATTGGGATGTTTAGAAATATCTTCCAAGGTGTGGAATTTAAGTTATAGGTATTAGTGTGGACTAAATCTTCCCAGGGATTTCTGTGTAGGCAACAAGCATAATAAAAAATGGCCCAGATCCTCTAGTTATTAAAAAAACCATATATGCAGCTTGGTGTTGTGTTAGGCTTTGAATTCTAAACATAAGTTGAAATTGACCATAATAGCAGGAGATGGAAATGGAAGTAGCTAAATCACCCCACCCCAATTAAATAATAATAACAATCAAGTATTACCCTCCAACTTCTCCAACCAGTTTCTATATAAAAATATCAGTAATGCTGGTTATAAGTTCCATTCTGACTTGGAAATCTTTCACCATTTGCAGATAGAAAGAAGTTCTAAAGCACCACAATGGCTAGAACACTGGCCCTGCTTGTGCTAGCCATAGTGGCAACCTGTGCCTTGGTACAGACCACAACCGCAGGGACCACCCATGTGGTCGGAGACAGCTTGGGCTGGGTGGTTCCCATTGGAGGTCCCGTTGTCTATGCCACTTGGGCTGTTTCCCATACCTTCTTAGTTGGTGATATCTTATGTAAGCAAATAATCACTTATCAATCTTTAATGCACTTTGAATACATTTGGTTGAGATTTTGGATCCTTTAGAATTTCCAATGTCAAAAGTTACGGCATTTCCTGAATTTTTGTGTATCCAGAACATTTCAAAGCAAGTTGGAGGGTTTTGAAATGTTAAAATTAAAAGTCTCCCAAATGAGGTGGATGTCAAATTAGATCATCTCTAATTTTTGCTTCTTATTTGTTCTGACAATTGTTGAAGTTTCTAAATCTTTAGCGTATTCATAACTGTTCAAACAAAGTTGGAGACTTTTGTATAGTTAAAACCATCGGAAACAAGACACGGTATTGACAATCAAATTAGATCATCTCTGGTCTTTGTTTCTTAGTATTTGCTTTCACAATCTTGACTTGTTATCAAATGAACTTTTTACTGGTGATTTACAAGGAACTATCAGCAAAAATTCTATATGGGAAGATCATAAGGCATTGCATAATAATCTCTGTGCAACATTTTCAGTGTTCAATTTCACAACTGGAGAAGAAGATGTAGCTAGAGTGACAAGGGAAGCATTTCTAACCTGCAATTCAACCAATCCAATCAGCCTCAAAACCACTGGTCCAGCCAATTTTACGTTGGACACACTGGGGGAGTACTATTTCATTGGCACTTTGGACAAGCACTGCATCTTGGGACAGAGGTTGGCCATCAATGTCACTGCACATTCTGAACCGACTCCCGCCCCAACTCCGCCTCCAGCTCCAGCTCCAAGAGAGCCGAAAAACTACACCGTCGGCGACAAACTCGGATGGCTAATCCCTCCACCAGATCCTCTCGGTCTCTTCTATGCCTCATGGGCTTATAACAAGACTTTCTTAGTTGGTGACACCTTAAGTAAGTGTCGATTTCACTGATGCAATTTATCAAACACTTGGTGGGCACACTCAATAAAGAAACCCCCAAAATACGTTGATCATTGAAATTAAATTTGATCTTTGCAGTTTTCAACTTCTACAATGGATCCGACGATGTTGCTGTGGTAACAAAAGAAGTGTTCGATTCCTGCAACATCACTTCAACTCTCGAGGTATTCAACTCAACACCGGCGAATATAGCCCTGAATTCCACCGGCGAACATTACTACACCTCCACCTACGAAAAACACTGCATGTTAGGACAGAAACTAGCGATCAATGTGACCGAACATACCACTCCCAGTCCTGGCTCAGCCCCTTCTCCTTCTACCACTGCACACCCACCCTCCCATACGGTCTCTCCTTCTCCCGCCACTACACATCCACCCTCCCATACGGTCTCTCCTCCCGCCACTACACATCCACCCTCCCATGCGGTCTCTCCTTCTCCGGCCACTGCACACCCACCCTCCACTCCGGCCTCTCCTTCATCCCCGGCAGGTGGAGCTGTGGCTCCTCCACCGAAAAACTCCGCTCCACCGGTAACCGCCGGCGGCCGCCTCTACATCTGTACTTTCCTGGTCTTCGTCATGGCCTCCGCATTCTATTTCTAAGCCTTTTTTTTCCTTTCGATTTTAGTTCTAAAGGAAAATACATGAAAGCGGAAATAATTTGAAAGTTAAATTACAAATTTAGTTTATACCGTTTTTATGATTTTAAAAGCTAGGGTTTAATGTTTATGATTTTATAAAACTTTATAAATATTTCAATACGATTATTTATAAAGATTTTACGAAACTATACAGATTGAATTCTACTTATAAATGATAGAAACTAAATTTCAACTTTCTCCAAATCATATAGAGCTAAATTTACAATTTAACTTTATTTGTATCAATTTTTAGTACATGGTGTATGAGAATATATGTAAATGATAATTAAGTTGTTAGGTCTTGATATTTATTGAAATAAATGAATGTTTGTACTGAATGTCGA ATGGCTAGAACACTGGCCCTGCTTGTGCTAGCCATAGTGGCAACCTGTGCCTTGGTACAGACCACAACCGCAGGGACCACCCATGTGGTCGGAGACAGCTTGGGCTGGGTGGTTCCCATTGGAGGTCCCGTTGTCTATGCCACTTGGGCTGTTTCCCATACCTTCTTAGTTGGTGATATCTTATTGTTCAATTTCACAACTGGAGAAGAAGATGTAGCTAGAGTGACAAGGGAAGCATTTCTAACCTGCAATTCAACCAATCCAATCAGCCTCAAAACCACTGGTCCAGCCAATTTTACGTTGGACACACTGGGGGAGTACTATTTCATTGGCACTTTGGACAAGCACTGCATCTTGGGACAGAGGTTGGCCATCAATGTCACTGCACATTCTGAACCGACTCCCGCCCCAACTCCGCCTCCAGCTCCAGCTCCAAGAGAGCCGAAAAACTACACCGTCGGCGACAAACTCGGATGGCTAATCCCTCCACCAGATCCTCTCGGTCTCTTCTATGCCTCATGGGCTTATAACAAGACTTTCTTAGTTGGTGACACCTTAATTTTCAACTTCTACAATGGATCCGACGATGTTGCTGTGGTAACAAAAGAAGTGTTCGATTCCTGCAACATCACTTCAACTCTCGAGGTATTCAACTCAACACCGGCGAATATAGCCCTGAATTCCACCGGCGAACATTACTACACCTCCACCTACGAAAAACACTGCATGTTAGGACAGAAACTAGCGATCAATGTGACCGAACATACCACTCCCAGTCCTGGCTCAGCCCCTTCTCCTTCTACCACTGCACACCCACCCTCCCATACGGTCTCTCCTTCTCCCGCCACTACACATCCACCCTCCCATACGGTCTCTCCTCCCGCCACTACACATCCACCCTCCCATGCGGTCTCTCCTTCTCCGGCCACTGCACACCCACCCTCCACTCCGGCCTCTCCTTCATCCCCGGCAGGTGGAGCTGTGGCTCCTCCACCGAAAAACTCCGCTCCACCGGTAACCGCCGGCGGCCGCCTCTACATCTGTACTTTCCTGGTCTTCGTCATGGCCTCCGCATTCTATTTCTAA ATGGCTAGAACACTGGCCCTGCTTGTGCTAGCCATAGTGGCAACCTGTGCCTTGGTACAGACCACAACCGCAGGGACCACCCATGTGGTCGGAGACAGCTTGGGCTGGGTGGTTCCCATTGGAGGTCCCGTTGTCTATGCCACTTGGGCTGTTTCCCATACCTTCTTAGTTGGTGATATCTTATTGTTCAATTTCACAACTGGAGAAGAAGATGTAGCTAGAGTGACAAGGGAAGCATTTCTAACCTGCAATTCAACCAATCCAATCAGCCTCAAAACCACTGGTCCAGCCAATTTTACGTTGGACACACTGGGGGAGTACTATTTCATTGGCACTTTGGACAAGCACTGCATCTTGGGACAGAGGTTGGCCATCAATGTCACTGCACATTCTGAACCGACTCCCGCCCCAACTCCGCCTCCAGCTCCAGCTCCAAGAGAGCCGAAAAACTACACCGTCGGCGACAAACTCGGATGGCTAATCCCTCCACCAGATCCTCTCGGTCTCTTCTATGCCTCATGGGCTTATAACAAGACTTTCTTAGTTGGTGACACCTTAATTTTCAACTTCTACAATGGATCCGACGATGTTGCTGTGGTAACAAAAGAAGTGTTCGATTCCTGCAACATCACTTCAACTCTCGAGGTATTCAACTCAACACCGGCGAATATAGCCCTGAATTCCACCGGCGAACATTACTACACCTCCACCTACGAAAAACACTGCATGTTAGGACAGAAACTAGCGATCAATGTGACCGAACATACCACTCCCAGTCCTGGCTCAGCCCCTTCTCCTTCTACCACTGCACACCCACCCTCCCATACGGTCTCTCCTTCTCCCGCCACTACACATCCACCCTCCCATACGGTCTCTCCTCCCGCCACTACACATCCACCCTCCCATGCGGTCTCTCCTTCTCCGGCCACTGCACACCCACCCTCCACTCCGGCCTCTCCTTCATCCCCGGCAGGTGGAGCTGTGGCTCCTCCACCGAAAAACTCCGCTCCACCGGTAACCGCCGGCGGCCGCCTCTACATCTGTACTTTCCTGGTCTTCGTCATGGCCTCCGCATTCTATTTCTAA MARTLALLVLAIVATCALVQTTTAGTTHVVGDSLGWVVPIGGPVVYATWAVSHTFLVGDILLFNFTTGEEDVARVTREAFLTCNSTNPISLKTTGPANFTLDTLGEYYFIGTLDKHCILGQRLAINVTAHSEPTPAPTPPPAPAPREPKNYTVGDKLGWLIPPPDPLGLFYASWAYNKTFLVGDTLIFNFYNGSDDVAVVTKEVFDSCNITSTLEVFNSTPANIALNSTGEHYYTSTYEKHCMLGQKLAINVTEHTTPSPGSAPSPSTTAHPPSHTVSPSPATTHPPSHTVSPPATTHPPSHAVSPSPATAHPPSTPASPSSPAGGAVAPPPKNSAPPVTAGGRLYICTFLVFVMASAFYF* Homology
BLAST of CsaV3_2G003000 vs. NCBI nr
Match: XP_004139413.2 (early nodulin-20 [Cucumis sativus] >KGN60691.1 hypothetical protein Csa_019486 [Cucumis sativus]) HSP 1 Score: 703.4 bits (1814), Expect = 1.0e-198 Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. NCBI nr
Match: XP_008457411.1 (PREDICTED: blue copper protein-like [Cucumis melo]) HSP 1 Score: 607.8 bits (1566), Expect = 6.0e-170 Identity = 321/361 (88.92%), Postives = 325/361 (90.03%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. NCBI nr
Match: KAA0063502.1 (blue copper protein-like [Cucumis melo var. makuwa] >TYJ97828.1 blue copper protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 603.6 bits (1555), Expect = 1.1e-168 Identity = 318/361 (88.09%), Postives = 324/361 (89.75%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. NCBI nr
Match: XP_038890593.1 (blue copper protein-like [Benincasa hispida]) HSP 1 Score: 516.9 bits (1330), Expect = 1.4e-142 Identity = 274/361 (75.90%), Postives = 297/361 (82.27%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. NCBI nr
Match: XP_023545405.1 (early nodulin-20-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 501.9 bits (1291), Expect = 4.6e-138 Identity = 272/361 (75.35%), Postives = 297/361 (82.27%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy Swiss-Prot
Match: P00302 (Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.9e-17 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.9e-17 Identity = 51/116 (43.97%), Postives = 65/116 (56.03%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 6.7e-15 Identity = 56/148 (37.84%), Postives = 68/148 (45.95%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-14 Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy Swiss-Prot
Match: P93329 (Early nodulin-20 OS=Medicago truncatula OX=3880 GN=ENOD20 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.9e-10 Identity = 68/200 (34.00%), Postives = 97/200 (48.50%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy TrEMBL
Match: A0A0A0LL06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006860 PE=4 SV=1) HSP 1 Score: 703.4 bits (1814), Expect = 5.0e-199 Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy TrEMBL
Match: A0A1S3C5K7 (blue copper protein-like OS=Cucumis melo OX=3656 GN=LOC103497103 PE=4 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 2.9e-170 Identity = 321/361 (88.92%), Postives = 325/361 (90.03%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy TrEMBL
Match: A0A5A7V5J0 (Blue copper protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00380 PE=4 SV=1) HSP 1 Score: 603.6 bits (1555), Expect = 5.4e-169 Identity = 318/361 (88.09%), Postives = 324/361 (89.75%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy TrEMBL
Match: A0A6J1KEJ6 (blue copper protein-like OS=Cucurbita maxima OX=3661 GN=LOC111493628 PE=4 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 4.2e-137 Identity = 268/360 (74.44%), Postives = 295/360 (81.94%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. ExPASy TrEMBL
Match: A0A6J1G2N0 (uclacyanin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111450269 PE=4 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 4.2e-137 Identity = 269/361 (74.52%), Postives = 297/361 (82.27%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein ) HSP 1 Score: 83.2 bits (204), Expect = 4.8e-16 Identity = 56/148 (37.84%), Postives = 68/148 (45.95%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. TAIR 10
Match: AT2G25060.1 (early nodulin-like protein 14 ) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-15 Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein ) HSP 1 Score: 78.6 bits (192), Expect = 1.2e-14 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 74.7 bits (182), Expect = 1.7e-13 Identity = 56/137 (40.88%), Postives = 69/137 (50.36%), Query Frame = 0
BLAST of CsaV3_2G003000 vs. TAIR 10
Match: AT3G20570.1 (early nodulin-like protein 9 ) HSP 1 Score: 73.6 bits (179), Expect = 3.8e-13 Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|