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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GTCCTCACACTCTCAAGATTCTTTAATTTAAACTTTGTCTTCACGTGTTTGATGACATGTCAACCTAAATCCTTACGTGGCAATAGCTACATTCAAAGCCATTCATAGTTGGAGTTGGGCAATCAATTAAGTGAACCATCACGAGCCCCTCACACTTTGGCTCGTGCCCACCTTGCTCCACAAACGAGCACACACTCATAAATCAAATCCCTTCTTTCTTTTCATCTTTCCCATATATAAAGTACCAAAAACCACATCAAACTATAACCAAAATCTCATCAATCATAATTGACGATCCTCTCCTCTTTACTTTCTTCTGGACATCAAAACATATATAAAAAAATGGCTCCCATTTCAAGATTACCTTGTGTCTTGGGGTTGAAGAACCTTGGAGGTGATGGTGGACATGGTTATCGTGAGGGATGTGATTGTGGTTATACTACTCTTGTTTCGATGGCAGAGGGGGACAGCGACGACGACGATGGTGGATACGACTTTGCTCCGGCTGCTTGAGTTTTGTTTTAAGATCATCTAAAGTGACAATTAGTAAAAGTTGGAGGAAGAGAGTCGTTGAAAAGATGTGGGAATTTGAAGAGAGAATGAGCATATATATTTTGTGTGGCAGGGAAAGATTGGCAAGAGAAAGTTAGGGTTACGGTTACTTAAATATATATGCAATAATTACCTTGAATTGTAATATGTTTGTTGAAAGAGTTTTGATTATTAATTAAATTTCATTAGGTGGTTTTTGAATATCCATATTTATTTTACTTTGTTCTAACATGTGTTTTTTTCTTAGTAAAATAACGTATCTAAATCATGGGTGGA mRNA sequence ATGGCTCCCATTTCAAGATTACCTTGTGTCTTGGGGTTGAAGAACCTTGGAGGTGATGGTGGACATGGTTATCGTGAGGGATGTGATTGTGGTTATACTACTCTTGTTTCGATGGCAGAGGGGGACAGCGACGACGACGATGGTGGATACGACTTTGCTCCGGCTGCTTGA Coding sequence (CDS) ATGGCTCCCATTTCAAGATTACCTTGTGTCTTGGGGTTGAAGAACCTTGGAGGTGATGGTGGACATGGTTATCGTGAGGGATGTGATTGTGGTTATACTACTCTTGTTTCGATGGCAGAGGGGGACAGCGACGACGACGATGGTGGATACGACTTTGCTCCGGCTGCTTGA Protein sequence MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDSDDDDGGYDFAPAA*
Homology
BLAST of CsaV3_2G002580 vs. NCBI nr
Match: KGN60650.1 (hypothetical protein Csa_019209 [Cucumis sativus]) HSP 1 Score: 124.8 bits (312), Expect = 2.4e-25 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
Query: 1 MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDSDDDDGGYDFAPAA 57
MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDSDDDDGGYDFAPAA
Sbjct: 1 MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDSDDDDGGYDFAPAA 56
BLAST of CsaV3_2G002580 vs. NCBI nr
Match: KAG6599418.1 (hypothetical protein SDJN03_09196, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 55.1 bits (131), Expect = 2.3e-04 Identity = 33/57 (57.89%), Postives = 36/57 (63.16%), Query Frame = 0
Query: 1 MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGD-SDDDDGGYDFAPAA 57
M PIS+ P L +LG G HGY E DCGY VSMA+ D DDDD YDFAPAA
Sbjct: 60 MVPISK-PMASWLTSLGA-GRHGYGERRDCGYIAPVSMAKEDGDDDDDDSYDFAPAA 114
BLAST of CsaV3_2G002580 vs. ExPASy TrEMBL
Match: A0A0A0LF41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005960 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.2e-25 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
Query: 1 MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDSDDDDGGYDFAPAA 57
MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDSDDDDGGYDFAPAA
Sbjct: 1 MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDSDDDDGGYDFAPAA 56
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KGN60650.1 | 2.4e-25 | 100.00 | hypothetical protein Csa_019209 [Cucumis sativus] | [more] |
| KAG6599418.1 | 2.3e-04 | 57.89 | hypothetical protein SDJN03_09196, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LF41 | 1.2e-25 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005960 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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