CsaV3_2G001650 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G001650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	zinc finger CCCH domain-containing protein 20-like
Location	chr2: 479979 .. 482606 (-)
RNA-Seq Expression	CsaV3_2G001650
Synteny	CsaV3_2G001650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTATCCAACTTAAGTAAAAAAAGGAATGAAATTGAAATGGTTAACCTCTTTTTAACGTGTGATTATGGTTATAGATTTGGAAAGAATCAGCAAGAATTAGCCATCAAAACGGGTAAAAAGGATACATAATACGACATATCGTTCGAATTATATGAGGCCACGTCAAAGGAATGGCCCAGCTATATCATAAGGTTTGACACGTGGAGGTATTGTAAGCCGTTGTCTTAACTTTAAAGAAAAACGGTGTCGTTAAGGCGTTTCCACATGTACGGATTAACCGTGGTGAAAAAGAAAAAGAAAAAGAAAAACAACGTAAAAGAGATATATATCTTTTTAACCATGGTTGGGTAGAAACTAACTACGGTTAGTATCGTAGTTCATTCAATTCTTCTTCTTCTTTTTTATTTTTCTTTTTGATATATTAATTTATTTATTATAAATGAAGGGACCATGCCGGTGGATTAGCCAACAATCTCCTTCTTCTCCCCCAAGAAGGAACAGAAGCTAAAGAAGAAGAAAAGAACAAAATCTAAGAGAAAACAAAGGCAAAAATGATCGTTGGCGAGCAGCCCAAGCGCACGAATCCAACGGTTCAGATTCCACAGTGGTCGTTTCTGGAGGATTCCGGGATGGATGTGTACAGTCATTCGCCGGGAAGTGGTGGTAGCAGCGGGTCTGTCAAGTGTGACGGATGTTCTAGCGGTGGTGGGTACTCTCCTTATTATCTACAGGAAGCATTAGCGATGTTGAAGCGGTATCTTCCGTCTAATGAGGCGGAGATGGACTCGGATATTGATGTTTCGGGTAAGGAGATAGATTCTCCGTTGGATGCCTACTCCTCTGATCAGTTTCGAATGTATGAGTTTAAAATTAAAAAGTGTACGAGAGGAAGATCGCATGACTGGACCGAGTGTCCGTTTGCTCATCCTGGCGAGAAGGCTCGCCGGCGAGATCCGAGGAGGTATTATTATTCAGGTACGGCGTGTGCGGATTTTCGGAAGGGAAGCTGTGTGAAAGGGGATGCGTGTGAGTTTGCTCATGGAGTTTTTGAGTGCTGGCTTCATCCGGCTCGTTATCGGACTCAGCCGTGCAAGGATGGGACGAGTTGCCGGAGGAGAGTTTGTTTCTTTGCTCATACACCGGAGCAACTTAGGGTTTTGCCTCAACAAAGTCCTCGGAGTACGAGCTCTATCCCTTCGTACGATGGATCGCCTCTCCGACAAGCAATCGAGGCCTGTGCAAAACAAATGCCCTATTTATCATCTCCAGGAACATCGCCACCAGTATCTCCTCGAATTGAATCTCCACCTCAATCACCGATTATTAAATCACTAAATCGACCTCACGCACCAAGTTCGATCAAAGAAATGGTTGCATCACTTCGAAATTTACAACTCAATAAGGAACTCTGTAAGTTACCATCTCCTTCTTCTTCTTCTTCCTCGTGGAATGTTCAAGTCGGATCTCCTGTATTCGGATCTCCAAAGGAATCCACCACTCGACCCGGTTTATCTACCCTTCCAGAAACTTCAACTCCTCCAGGTATCCGATATCTCGATTTCTGGGACCTGGGTACCGGAGAGGAACCGGCAATGGAGCGAGTGGAGTCCGGAAGAGACCTTCGTGCAAAAATGTTCGAGAAATTAAGGAAGGAGAACTCCGTTGGCTGCGGTGATCAGGACAAAAACAGCAGTGGTGCCGGAGGTCTGGATGTCGATTGGATCTCAGAGCTCCTCCAGTAAATCAAACCATTGGTGCTGACAGAAACAAAAAGAAAAAAAAAAAAAGAATGAAAAGAAAACGAAAAAGGTTCGTCTCTGATTCCATTTTGGCTCCATTAAAACCAAGCTTTCTTCCGCTTGTTTTCATGATTATAATTATAACAGTATCAGAATCAGATAGAGAAGAATTTGAATCTTTTCAATTTGGAAGAACATGCTAAGTTTTTTTTTTTTTTAAGATTCTCTGTAAATATTAAAAATTAGGGGGGATGGGTGTGGAAATGGATTGAGAGATTGGAGAATCAAATCTGTTATGTTTCTTGGGGAATTTTCAAGATGAACATATATCAAAAGAAGGAGGTAGTTCAAAAAAAAAAAAAAGAAAAAAAGAAAAGTAAAAGAAGAAGAAGAAGAAAAGAAAAGGAATGGGTATCTTCTTTTCTTTTTGTACAGGGTCTTAGCAAATTCACACACTTCAATCGTTATTACTGTATTTTGTGGAGTTGTAAACTCTTTATGATTGTATTAAGGAAAAAAAAAGAAGATTAACAATATATATATATATATTATTTATAAATGTATTGAAATGCTAATGATGTTGTTACTGTAATTTCAATTTTTGTTTTCTTCTTTTTTGTACAACTAATTCTCATTAATTAAGTTGATAAATTATAATGAATGTTTGTGATAATTTGGGTTAGTAGCCATAATTAAGGCATTAATTGGGGTGACACATTTACTTAAATCCTCTTTTGCCTAAAGTACAAAAAGATTTTTTTAAGATCCCAATCCAAAAGGAATAGGAATGGGATTGGAATTGAATTGAACAATTTTACTTTTAATAATAAAAAAACTCATATCTAATATTTAAAAATTAAAATATAAGAGTCAAAAAACAATAGGAT

mRNA sequence

ATGATCGTTGGCGAGCAGCCCAAGCGCACGAATCCAACGGTTCAGATTCCACAGTGGTCGTTTCTGGAGGATTCCGGGATGGATGTGTACAGTCATTCGCCGGGAAGTGGTGGTAGCAGCGGGTCTGTCAAGTGTGACGGATGTTCTAGCGGTGGTGGGTACTCTCCTTATTATCTACAGGAAGCATTAGCGATGTTGAAGCGGTATCTTCCGTCTAATGAGGCGGAGATGGACTCGGATATTGATGTTTCGGGTAAGGAGATAGATTCTCCGTTGGATGCCTACTCCTCTGATCAGTTTCGAATGTATGAGTTTAAAATTAAAAAGTGTACGAGAGGAAGATCGCATGACTGGACCGAGTGTCCGTTTGCTCATCCTGGCGAGAAGGCTCGCCGGCGAGATCCGAGGAGGTATTATTATTCAGGTACGGCGTGTGCGGATTTTCGGAAGGGAAGCTGTGTGAAAGGGGATGCGTGTGAGTTTGCTCATGGAGTTTTTGAGTGCTGGCTTCATCCGGCTCGTTATCGGACTCAGCCGTGCAAGGATGGGACGAGTTGCCGGAGGAGAGTTTGTTTCTTTGCTCATACACCGGAGCAACTTAGGGTTTTGCCTCAACAAAGTCCTCGGAGTACGAGCTCTATCCCTTCGTACGATGGATCGCCTCTCCGACAAGCAATCGAGGCCTGTGCAAAACAAATGCCCTATTTATCATCTCCAGGAACATCGCCACCAGTATCTCCTCGAATTGAATCTCCACCTCAATCACCGATTATTAAATCACTAAATCGACCTCACGCACCAAGTTCGATCAAAGAAATGGTTGCATCACTTCGAAATTTACAACTCAATAAGGAACTCTGTAAGTTACCATCTCCTTCTTCTTCTTCTTCCTCGTGGAATGTTCAAGTCGGATCTCCTGTATTCGGATCTCCAAAGGAATCCACCACTCGACCCGGTTTATCTACCCTTCCAGAAACTTCAACTCCTCCAGGTATCCGATATCTCGATTTCTGGGACCTGGGTACCGGAGAGGAACCGGCAATGGAGCGAGTGGAGTCCGGAAGAGACCTTCGTGCAAAAATGTTCGAGAAATTAAGGAAGGAGAACTCCGTTGGCTGCGGTGATCAGGACAAAAACAGCAGTGGTGCCGGAGGTCTGGATGTCGATTGGATCTCAGAGCTCCTCCAGTAA

Coding sequence (CDS)

ATGATCGTTGGCGAGCAGCCCAAGCGCACGAATCCAACGGTTCAGATTCCACAGTGGTCGTTTCTGGAGGATTCCGGGATGGATGTGTACAGTCATTCGCCGGGAAGTGGTGGTAGCAGCGGGTCTGTCAAGTGTGACGGATGTTCTAGCGGTGGTGGGTACTCTCCTTATTATCTACAGGAAGCATTAGCGATGTTGAAGCGGTATCTTCCGTCTAATGAGGCGGAGATGGACTCGGATATTGATGTTTCGGGTAAGGAGATAGATTCTCCGTTGGATGCCTACTCCTCTGATCAGTTTCGAATGTATGAGTTTAAAATTAAAAAGTGTACGAGAGGAAGATCGCATGACTGGACCGAGTGTCCGTTTGCTCATCCTGGCGAGAAGGCTCGCCGGCGAGATCCGAGGAGGTATTATTATTCAGGTACGGCGTGTGCGGATTTTCGGAAGGGAAGCTGTGTGAAAGGGGATGCGTGTGAGTTTGCTCATGGAGTTTTTGAGTGCTGGCTTCATCCGGCTCGTTATCGGACTCAGCCGTGCAAGGATGGGACGAGTTGCCGGAGGAGAGTTTGTTTCTTTGCTCATACACCGGAGCAACTTAGGGTTTTGCCTCAACAAAGTCCTCGGAGTACGAGCTCTATCCCTTCGTACGATGGATCGCCTCTCCGACAAGCAATCGAGGCCTGTGCAAAACAAATGCCCTATTTATCATCTCCAGGAACATCGCCACCAGTATCTCCTCGAATTGAATCTCCACCTCAATCACCGATTATTAAATCACTAAATCGACCTCACGCACCAAGTTCGATCAAAGAAATGGTTGCATCACTTCGAAATTTACAACTCAATAAGGAACTCTGTAAGTTACCATCTCCTTCTTCTTCTTCTTCCTCGTGGAATGTTCAAGTCGGATCTCCTGTATTCGGATCTCCAAAGGAATCCACCACTCGACCCGGTTTATCTACCCTTCCAGAAACTTCAACTCCTCCAGGTATCCGATATCTCGATTTCTGGGACCTGGGTACCGGAGAGGAACCGGCAATGGAGCGAGTGGAGTCCGGAAGAGACCTTCGTGCAAAAATGTTCGAGAAATTAAGGAAGGAGAACTCCGTTGGCTGCGGTGATCAGGACAAAAACAGCAGTGGTGCCGGAGGTCTGGATGTCGATTGGATCTCAGAGCTCCTCCAGTAA

Protein sequence

MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPGTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWNVQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ*

Homology

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BLAST of CsaV3_2G001650 vs. NCBI nr
Match: XP_011648617.1 (zinc finger CCCH domain-containing protein 20 [Cucumis sativus] >KGN60578.2 hypothetical protein Csa_019260 [Cucumis sativus])

HSP 1 Score: 817.8 bits (2111), Expect = 4.2e-233
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ
Sbjct: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60

Query: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE
Sbjct: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180
           CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC
Sbjct: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPG 240
           KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPG
Sbjct: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPG 240

Query: 241 TSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWN 300
           TSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWN
Sbjct: 241 TSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWN 300

Query: 301 VQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAK 360
           VQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAK
Sbjct: 301 VQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAK 360

Query: 361 MFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ 397
           MFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ
Sbjct: 361 MFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ 396

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BLAST of CsaV3_2G001650 vs. NCBI nr
Match: KAA0061507.1 (zinc finger CCCH domain-containing protein 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 775.4 bits (2001), Expect = 2.4e-220
Identity = 376/397 (94.71%), Postives = 387/397 (97.48%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSH-SPGSGGSSGSVKCDGCSSGGGYSPYYL 60
           MIVGEQPKRTNPTVQIP W+FLED+GMDVYSH SPGSGGSSGSVKCDGCSSGGGYSPYYL
Sbjct: 1   MIVGEQPKRTNPTVQIPPWTFLEDAGMDVYSHSSPGSGGSSGSVKCDGCSSGGGYSPYYL 60

Query: 61  QEALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWT 120
           QEALAMLKRYLPSNEAEMDSDIDVSGKE+DSP+DAYSSDQFRMYEFKIKKCTRGRSHDWT
Sbjct: 61  QEALAMLKRYLPSNEAEMDSDIDVSGKEMDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT 120

Query: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP 180
           ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP
Sbjct: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP 180

Query: 181 CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSP 240
           CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRST+SIPSYDGSPLRQAIEACAKQMPYLSSP
Sbjct: 181 CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTTSIPSYDGSPLRQAIEACAKQMPYLSSP 240

Query: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSW 300
           GTSPPVSPRIESPPQSPIIKSLNRPHAPSSI EM+ASLRNLQLNKELCK+ SP SSSSSW
Sbjct: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSINEMIASLRNLQLNKELCKVQSP-SSSSSW 300

Query: 301 NVQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRA 360
           NVQVGSPVFGSPK+STTR GL +LPETSTPPGIRYLDFW+LG GEEPAMERVESGRDLRA
Sbjct: 301 NVQVGSPVFGSPKDSTTRSGLPSLPETSTPPGIRYLDFWELGIGEEPAMERVESGRDLRA 360

Query: 361 KMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ 397
           KMFEKLRKENSVGCGDQDKNS GAGGLDV WISELL+
Sbjct: 361 KMFEKLRKENSVGCGDQDKNSGGAGGLDVGWISELLK 396

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BLAST of CsaV3_2G001650 vs. NCBI nr
Match: XP_008459142.1 (PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis melo])

HSP 1 Score: 775.4 bits (2001), Expect = 2.4e-220
Identity = 376/397 (94.71%), Postives = 387/397 (97.48%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSH-SPGSGGSSGSVKCDGCSSGGGYSPYYL 60
           MIVGEQPKRTNPTVQIP W+FLED+GMDVYSH SPGSGGSSGSVKCDGCSSGGGYSPYYL
Sbjct: 1   MIVGEQPKRTNPTVQIPPWTFLEDTGMDVYSHSSPGSGGSSGSVKCDGCSSGGGYSPYYL 60

Query: 61  QEALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWT 120
           QEALAMLKRYLPSNEAEMDSDIDVSGKE+DSP+DAYSSDQFRMYEFKIKKCTRGRSHDWT
Sbjct: 61  QEALAMLKRYLPSNEAEMDSDIDVSGKEMDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT 120

Query: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP 180
           ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP
Sbjct: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP 180

Query: 181 CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSP 240
           CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRST+SIPSYDGSPLRQAIEACAKQMPYLSSP
Sbjct: 181 CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTTSIPSYDGSPLRQAIEACAKQMPYLSSP 240

Query: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSW 300
           GTSPPVSPRIESPPQSPIIKSLNRPHAPSSI EM+ASLRNLQLNKELCK+ SP SSSSSW
Sbjct: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSINEMIASLRNLQLNKELCKVQSP-SSSSSW 300

Query: 301 NVQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRA 360
           NVQVGSPVFGSPK+STTR GL +LPETSTPPGIRYLDFW+LG GEEPAMERVESGRDLRA
Sbjct: 301 NVQVGSPVFGSPKDSTTRSGLPSLPETSTPPGIRYLDFWELGIGEEPAMERVESGRDLRA 360

Query: 361 KMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ 397
           KMFEKLRKENSVGCGDQDKNS GAGGLDV WISELL+
Sbjct: 361 KMFEKLRKENSVGCGDQDKNSGGAGGLDVGWISELLK 396

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BLAST of CsaV3_2G001650 vs. NCBI nr
Match: XP_038890937.1 (zinc finger CCCH domain-containing protein 20-like [Benincasa hispida])

HSP 1 Score: 725.3 bits (1871), Expect = 2.8e-205
Identity = 360/398 (90.45%), Postives = 372/398 (93.47%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           MIVGEQPKR NPTVQIP W+FLEDS MDVYSHSPGSGGSSGSVKCDGCSS GGYSPYYLQ
Sbjct: 1   MIVGEQPKRPNPTVQIPPWTFLEDSAMDVYSHSPGSGGSSGSVKCDGCSS-GGYSPYYLQ 60

Query: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALAMLKRYLPSNEAEMDSD DVSG+E+DS +DAYSSDQFRMYEFKIKKCTRGRSHDWTE
Sbjct: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSLVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180
           CPFAHPGEKARRRDPRRYYYSGTACADFRKGSC+KGDACEFAHGVFECWLHPARYRTQPC
Sbjct: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPG 240
           KDGTSCRRRVCFFAHTPEQLRVLPQQSPRST+SIPSYDGSPLRQAIEACAKQMPYLSSPG
Sbjct: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTNSIPSYDGSPLRQAIEACAKQMPYLSSPG 240

Query: 241 TSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWN 300
           TSPPVSPRIESPPQSP+IKSLNRPHA SSI EMVASLR+LQLNKE CK+ SP   SSSWN
Sbjct: 241 TSPPVSPRIESPPQSPMIKSLNRPHATSSINEMVASLRSLQLNKEFCKVQSP---SSSWN 300

Query: 301 VQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAK 360
           VQVGSPVFGSPKES TR GLS+LP+T T P IRYLDFWDLG GEEPAMERVESGRDLRAK
Sbjct: 301 VQVGSPVFGSPKES-TRSGLSSLPDTPTRPSIRYLDFWDLGCGEEPAMERVESGRDLRAK 360

Query: 361 MFEKLRKENS--VGCGDQDKNSSGAGGLDVDWISELLQ 397
           M EKLRKENS  VGCGDQD N SG GGLDV WISELL+
Sbjct: 361 MLEKLRKENSVGVGCGDQD-NYSGGGGLDVGWISELLK 392

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BLAST of CsaV3_2G001650 vs. NCBI nr
Match: TYK10766.1 (zinc finger CCCH domain-containing protein 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 722.2 bits (1863), Expect = 2.4e-204
Identity = 352/371 (94.88%), Postives = 361/371 (97.30%), Query Frame = 0


Query: 27  MDVYSH-SPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAEMDSDIDVSG 86
           MDVYSH SPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAEMDSDIDVSG
Sbjct: 1   MDVYSHSSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAEMDSDIDVSG 60

Query: 87  KEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTAC 146
           KE+DSP+DAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTAC
Sbjct: 61  KEMDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTAC 120

Query: 147 ADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQ 206
           ADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQ
Sbjct: 121 ADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQ 180

Query: 207 QSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPGTSPPVSPRIESPPQSPIIKSLNRPH 266
           QSPRST+SIPSYDGSPLRQAIEACAKQMPYLSSPGTSPPVSPRIESPPQSPIIKSLNRPH
Sbjct: 181 QSPRSTTSIPSYDGSPLRQAIEACAKQMPYLSSPGTSPPVSPRIESPPQSPIIKSLNRPH 240

Query: 267 APSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWNVQVGSPVFGSPKESTTRPGLSTLPE 326
           APSSI EM+ASLRNLQLNKELCK+ SP SSSSSWNVQVGSPVFGS K+STTR GL +LPE
Sbjct: 241 APSSINEMIASLRNLQLNKELCKVQSP-SSSSSWNVQVGSPVFGSSKDSTTRSGLPSLPE 300

Query: 327 TSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKNSSGAGG 386
           TSTPPGIRYLDFW+LG GEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKNS GAGG
Sbjct: 301 TSTPPGIRYLDFWELGIGEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKNSGGAGG 360

Query: 387 LDVDWISELLQ 397
           LDV WISELL+
Sbjct: 361 LDVGWISELLK 370

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BLAST of CsaV3_2G001650 vs. ExPASy Swiss-Prot
Match: O82199 (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 4.5e-105
Identity = 210/399 (52.63%), Postives = 263/399 (65.91%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  +  NPTV IP W   ED  +     SP  GGSS                  + 
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSEDLTVSDIYGSP-DGGSS------------------MM 60

Query: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALA L+RYLPSNE + DSD D+SG   DSP+DAY+ D FRMYEFK+++C RGRSHDWTE
Sbjct: 61  EALAELQRYLPSNEPDPDSDPDLSGP--DSPIDAYTCDHFRMYEFKVRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+++YSGTAC +FRKG C +GDACEF+HGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYD--GSPLRQAIEACAKQMPYLSS 240
           KDG +CRRRVCFFAH+P+Q+RVLP QSP     + S+D     +R+A +        +S 
Sbjct: 181 KDGGNCRRRVCFFAHSPDQIRVLPNQSP---DRVDSFDVLSPTIRRAFQFS------ISP 240

Query: 241 PGTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSS 300
              SPPVSPR +S     +   L+R    +   ++VASLRNLQLNK        SS SSS
Sbjct: 241 SSNSPPVSPRGDSDSSCSL---LSRSLGSNLGNDVVASLRNLQLNK------VKSSLSSS 300

Query: 301 WNVQVG--SPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRD 360
           +N Q+G     FGSP+ S   PG  +LP T T PG  +++ W+ G  EEPAMERVESGR+
Sbjct: 301 YNNQIGGYGSGFGSPRGSVLGPGFRSLPTTPTRPG--FMNIWENGLEEEPAMERVESGRE 358

Query: 361 LRAKMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELL 396
           LRA++FEKL KEN +G  + D +       DV W+S+L+
Sbjct: 361 LRAQLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVSDLV 358

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BLAST of CsaV3_2G001650 vs. ExPASy Swiss-Prot
Match: Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 5.9e-97
Identity = 203/400 (50.75%), Postives = 258/400 (64.50%), Query Frame = 0


Query: 16  IPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEA 75
           +P WS L  SG+DV     G GG  G             +PY     +A L+ YLP+N+ 
Sbjct: 11  VPPWSHLPVSGVDVL----GGGGGGGD----------EMTPY----VIAALRDYLPANDV 70

Query: 76  EMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDP 135
            + +D +     + + +DAY+ D+FRMYEFK+++C RGRSHDWTECPFAHPGEKARRRDP
Sbjct: 71  GVGADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDP 130

Query: 136 RRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAH 195
           R+Y+YSGTAC DFRKG C +GDACE+AHGVFECWLHPARYRTQPCKDGT+CRRRVCFFAH
Sbjct: 131 RKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAH 190

Query: 196 TPEQLRVLP--QQSPRSTSSIP---SYDGSPL-RQAIEACAKQMPYLSSPGT---SPPVS 255
           TP+QLRVLP  Q SPRS +S P   SYDGSPL RQA E+   +    SSP +   SPP S
Sbjct: 191 TPDQLRVLPAQQSSPRSVASSPLAESYDGSPLRRQAFESYLTKTIMSSSPTSTLMSPPKS 250

Query: 256 PRIESPPQSP----IIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWNVQ 315
           P  ESPP SP     I+  + P   S + +++AS R L+LNK        SS S  W+  
Sbjct: 251 PPSESPPLSPDGAAAIRRGSWPGVGSPVNDVLASFRQLRLNK------VKSSPSGGWSYP 310

Query: 316 VGSPVFGSPKEST------TRPGLSTLPETSTPPGIRYLDFWDLG-TGEEPAMERVESGR 375
             S V+GSPK +T      T P  ST   T+    +  L+  DLG  G+E  ++RVESGR
Sbjct: 311 SSSAVYGSPKAATGLYSLPTTPLASTATVTTASSFMPNLEPLDLGLIGDEEPVQRVESGR 370

Query: 376 DLRAKMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELL 396
            LR K+FE+L ++ ++  GD    ++   GLDVDW+S+L+
Sbjct: 371 ALREKVFERLSRDGAIS-GDATAFATAGVGLDVDWVSDLI 385

[Close]

BLAST of CsaV3_2G001650 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.5e-95
Identity = 204/397 (51.39%), Postives = 252/397 (63.48%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  +RT PTV+IP W  LE+     +         S  +    CS         + 
Sbjct: 1   MMIGE-TRRTYPTVEIPPWPVLEELTTSEF--------FSPVMNSPDCS---------ML 60

Query: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALA L+RYLPSNE + +S  D+ G   DSP+DAYS D FRMY+FK+++C RGRSHDWTE
Sbjct: 61  EALAGLQRYLPSNEPDPESYPDLLGP--DSPIDAYSCDHFRMYDFKVRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+Y+YSGTAC DFRKG C KGD+CEFAHGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYD-GSPLRQAIEACAKQMPYLSSP 240
           KDG +C R++CFFAH+P+QLR L  +SP     + S+D  SP+R    A A Q+  +S  
Sbjct: 181 KDGGNCLRKICFFAHSPDQLRFLHTRSP---DRVDSFDVSSPIR----ARAFQLS-ISPV 240

Query: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSW 300
             SPP+SPR +S   SP+ +SL+R     SI ++V S RNLQ N           S    
Sbjct: 241 SGSPPMSPRADS-ESSPMTQSLSRSLGSCSINDVVPSFRNLQFNS--------VKSFPRN 300

Query: 301 NVQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMER-VESGRDLR 360
           N   G   FGSP+ S   PG  +LP T T PG   LD W+ G  EEP MER VESGR+LR
Sbjct: 301 NPLFG---FGSPRGSILGPGFQSLPTTPTRPG--NLDIWEYGLEEEPVMERVVESGRELR 355

Query: 361 AKMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELL 396
            KM EKL KEN +    QD + +     DV W+S+LL
Sbjct: 361 EKMREKLHKENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]

BLAST of CsaV3_2G001650 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.8e-82
Identity = 193/393 (49.11%), Postives = 234/393 (59.54%), Query Frame = 0


Query: 47  GCSSGGG------YSPYYLQEALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQF 106
           G   GGG       +PY+L   L  L+ YLPSNEA    D +     + + +DAY+ D+F
Sbjct: 23  GVEGGGGRESEVVAAPYHL---LDTLRHYLPSNEAAAAED-EEEAAAVAAAVDAYACDEF 82

Query: 107 RMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACE 166
           RMYEFK+++C RGRSHDWTECPFAHPGEKARRRDPRRY YSGTAC DFRKG C +GDACE
Sbjct: 83  RMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFRKGGCKRGDACE 142

Query: 167 FAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSS------- 226
           FAHGVFECWLHPARYRTQPCKDGT+CRRRVCFFAHTP+QLRVLP    + ++S       
Sbjct: 143 FAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQGSNSPRGCGGG 202

Query: 227 ---------IPSYDGSPL-RQAIEACAKQMPYLSSPGT---SPPVSPRIESPPQSPIIKS 286
                      SYDGSPL RQA E+   +    SSP +   SPP SP  ESPP SP    
Sbjct: 203 GAGAAASPLAESYDGSPLRRQAFESYLTKSIMSSSPTSTLVSPPRSPPSESPPLSPDAAG 262

Query: 287 LNRPHA----PSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWNVQVGSPVFGSPKE--S 346
             R  A     S + ++  SLR L+L        SP S+ S  +       +GSPK   +
Sbjct: 263 ALRRGAWAGVGSPVNDVHVSLRQLRLG-------SPRSAPSCASFLPAGYQYGSPKSPAA 322

Query: 347 TTRPGLSTLPETST---PPGIR-------YLDFWDLG-TGEEPAMERVESGRDLRAKMFE 396
                L +LP T T   P  +         ++  DLG   EE  MERVESGR LR K+FE
Sbjct: 323 AAAAALYSLPSTPTRLSPVTVTTASGATVTVEPLDLGLIEEEQPMERVESGRALREKVFE 382

[Close]

BLAST of CsaV3_2G001650 vs. ExPASy Swiss-Prot
Match: O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.8e-80
Identity = 177/372 (47.58%), Postives = 220/372 (59.14%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE   R +PT+ IPQW  + D    +   SP S  +  SV      +   +SP    
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATI--SSPFSSVNLNSV------NDYPHSPSPYL 60

Query: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           ++ A L RYLPSNE   DSD   SG E     D++SSD+FR+YEFKI++C RGRSHDWTE
Sbjct: 61  DSFASLFRYLPSNELTNDSD-SSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180
           CPFAHPGEKARRRDPR+++YSGTAC +FRKGSC +GD+CEF+HGVFECWLHP+RYRTQPC
Sbjct: 121 CPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPG 240
           KDGTSCRRR+CFFAHT EQLRVLP               SP               +S  
Sbjct: 181 KDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP---------------TSIL 240

Query: 241 TSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWN 300
            SP  SP  ESPP SP            S  E++AS+R +QLN   C   SP  S+    
Sbjct: 241 VSPSFSPPSESPPLSP------------STGELIASMRKMQLNGGGCSWSSPMRSA---- 300

Query: 301 VQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAK 360
                     P  S+ RP      + +T P IR  +       E PAME VESG++LRA+
Sbjct: 301 -------VRLPFSSSLRP-----IQAATWPRIREFEI-----EEAPAMEFVESGKELRAE 315

Query: 361 MFEKLRKENSVG 373
           M+ +L +ENS+G
Sbjct: 361 MYARLSRENSLG 315

[Close]

BLAST of CsaV3_2G001650 vs. ExPASy TrEMBL
Match: A0A5A7V3Q9 (Zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00680 PE=4 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 1.1e-220
Identity = 376/397 (94.71%), Postives = 387/397 (97.48%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSH-SPGSGGSSGSVKCDGCSSGGGYSPYYL 60
           MIVGEQPKRTNPTVQIP W+FLED+GMDVYSH SPGSGGSSGSVKCDGCSSGGGYSPYYL
Sbjct: 1   MIVGEQPKRTNPTVQIPPWTFLEDAGMDVYSHSSPGSGGSSGSVKCDGCSSGGGYSPYYL 60

Query: 61  QEALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWT 120
           QEALAMLKRYLPSNEAEMDSDIDVSGKE+DSP+DAYSSDQFRMYEFKIKKCTRGRSHDWT
Sbjct: 61  QEALAMLKRYLPSNEAEMDSDIDVSGKEMDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT 120

Query: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP 180
           ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP
Sbjct: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP 180

Query: 181 CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSP 240
           CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRST+SIPSYDGSPLRQAIEACAKQMPYLSSP
Sbjct: 181 CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTTSIPSYDGSPLRQAIEACAKQMPYLSSP 240

Query: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSW 300
           GTSPPVSPRIESPPQSPIIKSLNRPHAPSSI EM+ASLRNLQLNKELCK+ SP SSSSSW
Sbjct: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSINEMIASLRNLQLNKELCKVQSP-SSSSSW 300

Query: 301 NVQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRA 360
           NVQVGSPVFGSPK+STTR GL +LPETSTPPGIRYLDFW+LG GEEPAMERVESGRDLRA
Sbjct: 301 NVQVGSPVFGSPKDSTTRSGLPSLPETSTPPGIRYLDFWELGIGEEPAMERVESGRDLRA 360

Query: 361 KMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ 397
           KMFEKLRKENSVGCGDQDKNS GAGGLDV WISELL+
Sbjct: 361 KMFEKLRKENSVGCGDQDKNSGGAGGLDVGWISELLK 396

[Close]

BLAST of CsaV3_2G001650 vs. ExPASy TrEMBL
Match: A0A1S3C9K7 (zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103498342 PE=4 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 1.1e-220
Identity = 376/397 (94.71%), Postives = 387/397 (97.48%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSH-SPGSGGSSGSVKCDGCSSGGGYSPYYL 60
           MIVGEQPKRTNPTVQIP W+FLED+GMDVYSH SPGSGGSSGSVKCDGCSSGGGYSPYYL
Sbjct: 1   MIVGEQPKRTNPTVQIPPWTFLEDTGMDVYSHSSPGSGGSSGSVKCDGCSSGGGYSPYYL 60

Query: 61  QEALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWT 120
           QEALAMLKRYLPSNEAEMDSDIDVSGKE+DSP+DAYSSDQFRMYEFKIKKCTRGRSHDWT
Sbjct: 61  QEALAMLKRYLPSNEAEMDSDIDVSGKEMDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT 120

Query: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP 180
           ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP
Sbjct: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP 180

Query: 181 CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSP 240
           CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRST+SIPSYDGSPLRQAIEACAKQMPYLSSP
Sbjct: 181 CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTTSIPSYDGSPLRQAIEACAKQMPYLSSP 240

Query: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSW 300
           GTSPPVSPRIESPPQSPIIKSLNRPHAPSSI EM+ASLRNLQLNKELCK+ SP SSSSSW
Sbjct: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSINEMIASLRNLQLNKELCKVQSP-SSSSSW 300

Query: 301 NVQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRA 360
           NVQVGSPVFGSPK+STTR GL +LPETSTPPGIRYLDFW+LG GEEPAMERVESGRDLRA
Sbjct: 301 NVQVGSPVFGSPKDSTTRSGLPSLPETSTPPGIRYLDFWELGIGEEPAMERVESGRDLRA 360

Query: 361 KMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ 397
           KMFEKLRKENSVGCGDQDKNS GAGGLDV WISELL+
Sbjct: 361 KMFEKLRKENSVGCGDQDKNSGGAGGLDVGWISELLK 396

[Close]

BLAST of CsaV3_2G001650 vs. ExPASy TrEMBL
Match: A0A5D3CK09 (Zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00790 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.2e-204
Identity = 352/371 (94.88%), Postives = 361/371 (97.30%), Query Frame = 0


Query: 27  MDVYSH-SPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAEMDSDIDVSG 86
           MDVYSH SPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAEMDSDIDVSG
Sbjct: 1   MDVYSHSSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAEMDSDIDVSG 60

Query: 87  KEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTAC 146
           KE+DSP+DAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTAC
Sbjct: 61  KEMDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTAC 120

Query: 147 ADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQ 206
           ADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQ
Sbjct: 121 ADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQ 180

Query: 207 QSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPGTSPPVSPRIESPPQSPIIKSLNRPH 266
           QSPRST+SIPSYDGSPLRQAIEACAKQMPYLSSPGTSPPVSPRIESPPQSPIIKSLNRPH
Sbjct: 181 QSPRSTTSIPSYDGSPLRQAIEACAKQMPYLSSPGTSPPVSPRIESPPQSPIIKSLNRPH 240

Query: 267 APSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWNVQVGSPVFGSPKESTTRPGLSTLPE 326
           APSSI EM+ASLRNLQLNKELCK+ SP SSSSSWNVQVGSPVFGS K+STTR GL +LPE
Sbjct: 241 APSSINEMIASLRNLQLNKELCKVQSP-SSSSSWNVQVGSPVFGSSKDSTTRSGLPSLPE 300

Query: 327 TSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKNSSGAGG 386
           TSTPPGIRYLDFW+LG GEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKNS GAGG
Sbjct: 301 TSTPPGIRYLDFWELGIGEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKNSGGAGG 360

Query: 387 LDVDWISELLQ 397
           LDV WISELL+
Sbjct: 361 LDVGWISELLK 370

[Close]

BLAST of CsaV3_2G001650 vs. ExPASy TrEMBL
Match: A0A6J1FG51 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111443876 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 4.5e-185
Identity = 320/400 (80.00%), Postives = 350/400 (87.50%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGS---SGS-VKCDGCSSGGGYSP 60
           M++ EQP R N  + +P W+F+ED   D YSHSPGSGGS   SGS VKCDGCS+G GYSP
Sbjct: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGVKCDGCSTGDGYSP 60

Query: 61  YYLQEALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSH 120
           +YLQEALAML++YLPS EAE++SD+D SG+E DSP+D YSSDQFRMYEFKIKKC RGRSH
Sbjct: 61  FYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLRGRSH 120

Query: 121 DWTECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYR 180
           DWTECPFAHPGEKARRRDPR+YYYSGTACADFRKG+C KGDACEFAHGVFECWLHPARYR
Sbjct: 121 DWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCTKGDACEFAHGVFECWLHPARYR 180

Query: 181 TQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYL 240
           TQPCKDGTSCRRRVCFFAHTPEQLR+LPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYL
Sbjct: 181 TQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYL 240

Query: 241 SSPGTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSS 300
           SS GTS PVSPRIESPPQSP+ +SLNRPHA SSI EMVASLR+LQL+KEL K+ SP   S
Sbjct: 241 SSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP---S 300

Query: 301 SSWNVQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRD 360
           S WNVQVGSPVFGSP ES+ R G S+LP+T TPP +RYLDFWDLG GEE AM RVESGRD
Sbjct: 301 SLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGCGEEQAMARVESGRD 360

Query: 361 LRAKMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ 397
           LRAKM EKLRKENSV CGDQ+K   G G +DV WISELL+
Sbjct: 361 LRAKMLEKLRKENSVACGDQEK--PGGGSVDVGWISELLK 395

[Close]

BLAST of CsaV3_2G001650 vs. ExPASy TrEMBL
Match: A0A6J1HL92 (zinc finger CCCH domain-containing protein 20-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465573 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.3e-184
Identity = 321/402 (79.85%), Postives = 350/402 (87.06%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGS-----SGS-VKCDGCSSGGGY 60
           M++ EQP R N  + +P W+F+ED   D YSHSPGSGGS     SGS VKCDGCSSG GY
Sbjct: 1   MMIDEQPNRPNQKLHVPPWAFMEDPASDGYSHSPGSGGSGSGSGSGSGVKCDGCSSGDGY 60

Query: 61  SPYYLQEALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGR 120
           SP+YLQEALAML++YLPS EAE++SD+DVSG+E DSP+D YSSDQFRMYEFKIKKC RGR
Sbjct: 61  SPFYLQEALAMLQQYLPSKEAEVESDLDVSGREPDSPVDTYSSDQFRMYEFKIKKCLRGR 120

Query: 121 SHDWTECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPAR 180
           SHDWTECPFAHPGEKARRRDPR+YYYSGTACADFRKG+C KGDACEFAHGVFECWLHPAR
Sbjct: 121 SHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHPAR 180

Query: 181 YRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMP 240
           YRTQPCKDGTSCRRRVCFFAHTPEQLR+LPQQSPRSTSSIPSYDGSPLRQAIEACAKQMP
Sbjct: 181 YRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQMP 240

Query: 241 YLSSPGTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSS 300
           YLSS GTS PVSPRIESPPQSP+ +SLNRPHA SSI EMVASLR+LQL+KEL K+ SP  
Sbjct: 241 YLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP-- 300

Query: 301 SSSSWNVQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESG 360
            SS WNVQVGSPVFGSP ES+ R G  +LP+T TPP +RYLDFWDLG GEE AM RVESG
Sbjct: 301 -SSLWNVQVGSPVFGSPGESSARSGFGSLPDTPTPPAVRYLDFWDLGCGEEQAMARVESG 360

Query: 361 RDLRAKMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ 397
           RDLRAKM EKLRKENSV CGDQ+K   G G +DV WISELL+
Sbjct: 361 RDLRAKMLEKLRKENSVACGDQEK--PGGGSVDVGWISELLK 397

[Close]

BLAST of CsaV3_2G001650 vs. TAIR 10
Match: AT2G19810.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 382.9 bits (982), Expect = 3.2e-106
Identity = 210/399 (52.63%), Postives = 263/399 (65.91%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  +  NPTV IP W   ED  +     SP  GGSS                  + 
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSEDLTVSDIYGSP-DGGSS------------------MM 60

Query: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALA L+RYLPSNE + DSD D+SG   DSP+DAY+ D FRMYEFK+++C RGRSHDWTE
Sbjct: 61  EALAELQRYLPSNEPDPDSDPDLSGP--DSPIDAYTCDHFRMYEFKVRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+++YSGTAC +FRKG C +GDACEF+HGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYD--GSPLRQAIEACAKQMPYLSS 240
           KDG +CRRRVCFFAH+P+Q+RVLP QSP     + S+D     +R+A +        +S 
Sbjct: 181 KDGGNCRRRVCFFAHSPDQIRVLPNQSP---DRVDSFDVLSPTIRRAFQFS------ISP 240

Query: 241 PGTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSS 300
              SPPVSPR +S     +   L+R    +   ++VASLRNLQLNK        SS SSS
Sbjct: 241 SSNSPPVSPRGDSDSSCSL---LSRSLGSNLGNDVVASLRNLQLNK------VKSSLSSS 300

Query: 301 WNVQVG--SPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRD 360
           +N Q+G     FGSP+ S   PG  +LP T T PG  +++ W+ G  EEPAMERVESGR+
Sbjct: 301 YNNQIGGYGSGFGSPRGSVLGPGFRSLPTTPTRPG--FMNIWENGLEEEPAMERVESGRE 358

Query: 361 LRAKMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELL 396
           LRA++FEKL KEN +G  + D +       DV W+S+L+
Sbjct: 361 LRAQLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVSDLV 358

[Close]

BLAST of CsaV3_2G001650 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 350.5 bits (898), Expect = 1.8e-96
Identity = 204/397 (51.39%), Postives = 252/397 (63.48%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  +RT PTV+IP W  LE+     +         S  +    CS         + 
Sbjct: 1   MMIGE-TRRTYPTVEIPPWPVLEELTTSEF--------FSPVMNSPDCS---------ML 60

Query: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALA L+RYLPSNE + +S  D+ G   DSP+DAYS D FRMY+FK+++C RGRSHDWTE
Sbjct: 61  EALAGLQRYLPSNEPDPESYPDLLGP--DSPIDAYSCDHFRMYDFKVRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+Y+YSGTAC DFRKG C KGD+CEFAHGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYD-GSPLRQAIEACAKQMPYLSSP 240
           KDG +C R++CFFAH+P+QLR L  +SP     + S+D  SP+R    A A Q+  +S  
Sbjct: 181 KDGGNCLRKICFFAHSPDQLRFLHTRSP---DRVDSFDVSSPIR----ARAFQLS-ISPV 240

Query: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSW 300
             SPP+SPR +S   SP+ +SL+R     SI ++V S RNLQ N           S    
Sbjct: 241 SGSPPMSPRADS-ESSPMTQSLSRSLGSCSINDVVPSFRNLQFNS--------VKSFPRN 300

Query: 301 NVQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMER-VESGRDLR 360
           N   G   FGSP+ S   PG  +LP T T PG   LD W+ G  EEP MER VESGR+LR
Sbjct: 301 NPLFG---FGSPRGSILGPGFQSLPTTPTRPG--NLDIWEYGLEEEPVMERVVESGRELR 355

Query: 361 AKMFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELL 396
            KM EKL KEN +    QD + +     DV W+S+LL
Sbjct: 361 EKMREKLHKENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]

BLAST of CsaV3_2G001650 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 300.1 bits (767), Expect = 2.7e-81
Identity = 177/372 (47.58%), Postives = 220/372 (59.14%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE   R +PT+ IPQW  + D    +   SP S  +  SV      +   +SP    
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATI--SSPFSSVNLNSV------NDYPHSPSPYL 60

Query: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           ++ A L RYLPSNE   DSD   SG E     D++SSD+FR+YEFKI++C RGRSHDWTE
Sbjct: 61  DSFASLFRYLPSNELTNDSD-SSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180
           CPFAHPGEKARRRDPR+++YSGTAC +FRKGSC +GD+CEF+HGVFECWLHP+RYRTQPC
Sbjct: 121 CPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPG 240
           KDGTSCRRR+CFFAHT EQLRVLP               SP               +S  
Sbjct: 181 KDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP---------------TSIL 240

Query: 241 TSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWN 300
            SP  SP  ESPP SP            S  E++AS+R +QLN   C   SP  S+    
Sbjct: 241 VSPSFSPPSESPPLSP------------STGELIASMRKMQLNGGGCSWSSPMRSA---- 300

Query: 301 VQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAK 360
                     P  S+ RP      + +T P IR  +       E PAME VESG++LRA+
Sbjct: 301 -------VRLPFSSSLRP-----IQAATWPRIREFEI-----EEAPAMEFVESGKELRAE 315

Query: 361 MFEKLRKENSVG 373
           M+ +L +ENS+G
Sbjct: 361 MYARLSRENSLG 315

[Close]

BLAST of CsaV3_2G001650 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 300.1 bits (767), Expect = 2.7e-81
Identity = 177/372 (47.58%), Postives = 220/372 (59.14%), Query Frame = 0


Query: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE   R +PT+ IPQW  + D    +   SP S  +  SV      +   +SP    
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATI--SSPFSSVNLNSV------NDYPHSPSPYL 60

Query: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           ++ A L RYLPSNE   DSD   SG E     D++SSD+FR+YEFKI++C RGRSHDWTE
Sbjct: 61  DSFASLFRYLPSNELTNDSD-SSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180
           CPFAHPGEKARRRDPR+++YSGTAC +FRKGSC +GD+CEF+HGVFECWLHP+RYRTQPC
Sbjct: 121 CPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPG 240
           KDGTSCRRR+CFFAHT EQLRVLP               SP               +S  
Sbjct: 181 KDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP---------------TSIL 240

Query: 241 TSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWN 300
            SP  SP  ESPP SP            S  E++AS+R +QLN   C   SP  S+    
Sbjct: 241 VSPSFSPPSESPPLSP------------STGELIASMRKMQLNGGGCSWSSPMRSA---- 300

Query: 301 VQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAK 360
                     P  S+ RP      + +T P IR  +       E PAME VESG++LRA+
Sbjct: 301 -------VRLPFSSSLRP-----IQAATWPRIREFEI-----EEAPAMEFVESGKELRAE 315

Query: 361 MFEKLRKENSVG 373
           M+ +L +ENS+G
Sbjct: 361 MYARLSRENSLG 315

[Close]

BLAST of CsaV3_2G001650 vs. TAIR 10
Match: AT1G03790.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-52
Identity = 109/227 (48.02%), Postives = 137/227 (60.35%), Query Frame = 0


Query: 93  DAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADFRK-G 152
           D Y+SD FRM+EFKI++CTR RSHDWT+CPFAHPGEKARRRDPRR+ YSG  C +FR+ G
Sbjct: 76  DPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGG 135

Query: 153 SCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRST 212
            C +GD CEFAHGVFECWLHP RYRT+ CKDG  C+R+VCFFAH+P QLRVLP ++    
Sbjct: 136 DCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPENVSGV 195

Query: 213 SSIPS----------YDGSPLRQAIEACAKQMPYLS-SPGTSPPVSPRIESPPQSPIIKS 272
           S+ PS             SP    +      + +LS SP  SPP+SP  ++   S   + 
Sbjct: 196 SASPSPAAKNPCCLFCSSSPTSTLL----GNLSHLSRSPSLSPPMSPANKAAAFS---RL 255

Query: 273 LNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWNVQVGSPV 308
            NR  +  S      S+    +  EL       S + +      SPV
Sbjct: 256 RNRAASAVSAAAAAGSMNYKDVLSELVNSLDSMSLAEALQASSSSPV 295

The following BLAST results are available for this feature:

BLAST of CsaV3_2G001650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648617.1	4.2e-233	100.00	zinc finger CCCH domain-containing protein 20 [Cucumis sativus] >KGN60578.2 hypo...	[more]
KAA0061507.1	2.4e-220	94.71	zinc finger CCCH domain-containing protein 20-like [Cucumis melo var. makuwa]	[more]
XP_008459142.1	2.4e-220	94.71	PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis melo]	[more]
XP_038890937.1	2.8e-205	90.45	zinc finger CCCH domain-containing protein 20-like [Benincasa hispida]	[more]
TYK10766.1	2.4e-204	94.88	zinc finger CCCH domain-containing protein 20-like [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_2G001650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82199	4.5e-105	52.63	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FU27	5.9e-97	50.75	Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]
Q9M0G2	2.5e-95	51.39	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6L4N4	1.8e-82	49.11	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]
O82307	3.8e-80	47.58	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CsaV3_2G001650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3Q9	1.1e-220	94.71	Zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3C9K7	1.1e-220	94.71	zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3CK09	1.2e-204	94.88	Zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo var. makuwa O...	[more]
A0A6J1FG51	4.5e-185	80.00	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1HL92	1.3e-184	79.85	zinc finger CCCH domain-containing protein 20-like isoform X1 OS=Cucurbita maxim...	[more]

BLAST of CsaV3_2G001650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19810.1	3.2e-106	52.63	CCCH-type zinc finger family protein	[more]
AT4G29190.1	1.8e-96	51.39	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.1	2.7e-81	47.58	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.2	2.7e-81	47.58	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G03790.1	1.2e-52	48.02	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 139..165 e-value: 0.0063 score: 25.7 coord: 174..197 e-value: 14.0 score: 7.1
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 139..166 score: 12.145366
None	No IPR available	GENE3D	3.30.1370.210		coord: 140..203 e-value: 1.7E-8 score: 36.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..388
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..328
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 8..395
None	No IPR available	PANTHER	PTHR14493:SF116	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20	coord: 8..395

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G001650.1	CsaV3_2G001650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding