CsaV3_1G046330 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTACCAATGGGTGAATCTCCGTTAGGTGGTGACGGTGGCTGCGATCGCCTGGAACAAGCTCTCCGAGAGTGTCACAAGCGAGTTCCAGAAGGTCCGGCCCGGCGGTCAGCCTGCCGACACCTGAACCGATCTCTTGCTGAGTGTCTGGTGGCGACGGCTTGTCCTAGCGAGGCGGAGGCGGTACGAACCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGCCTCTCCTCTCTACAATTTTGAAACCCTAGATCCTTGAAATCAGTGTAGAAAGATGGGAAAGCTGTAGATTGGGGATCGCATCGGGGAAGATGGATTAA ATGTTACCAATGGGTGAATCTCCGTTAGGTGGTGACGGTGGCTGCGATCGCCTGGAACAAGCTCTCCGAGAGTGTCACAAGCGAGTTCCAGAAGGTCCGGCCCGGCGGTCAGCCTGCCGACACCTGAACCGATCTCTTGCTGAGTGTCTGGTGGCGACGGCTTGTCCTAGCGAGGCGGAGGCGATCCTTGAAATCAGTGTAGAAAGATGGGAAAGCTGTAGATTGGGGATCGCATCGGGGAAGATGGATTAA ATGTTACCAATGGGTGAATCTCCGTTAGGTGGTGACGGTGGCTGCGATCGCCTGGAACAAGCTCTCCGAGAGTGTCACAAGCGAGTTCCAGAAGGTCCGGCCCGGCGGTCAGCCTGCCGACACCTGAACCGATCTCTTGCTGAGTGTCTGGTGGCGACGGCTTGTCCTAGCGAGGCGGAGGCGATCCTTGAAATCAGTGTAGAAAGATGGGAAAGCTGTAGATTGGGGATCGCATCGGGGAAGATGGATTAA MLPMGESPLGGDGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAEAILEISVERWESCRLGIASGKMD* Homology
BLAST of CsaV3_1G046330 vs. NCBI nr
Match: KAE8653663.1 (hypothetical protein Csa_007602 [Cucumis sativus]) HSP 1 Score: 174.9 bits (442), Expect = 3.0e-40 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. NCBI nr
Match: XP_004145445.1 (uncharacterized protein LOC101219184 [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 3.8e-27 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. NCBI nr
Match: XP_008459043.1 (PREDICTED: uncharacterized protein LOC103498267 [Cucumis melo] >KAA0043206.1 uncharacterized protein E6C27_scaffold110G00780 [Cucumis melo var. makuwa] >TYK12262.1 uncharacterized protein E5676_scaffold302G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23 Identity = 55/62 (88.71%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. NCBI nr
Match: XP_038893663.1 (uncharacterized protein LOC120082530 [Benincasa hispida]) HSP 1 Score: 115.2 bits (287), Expect = 2.8e-22 Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. NCBI nr
Match: XP_022142592.1 (uncharacterized protein LOC111012670 [Momordica charantia]) HSP 1 Score: 112.5 bits (280), Expect = 1.8e-21 Identity = 52/64 (81.25%), Postives = 60/64 (93.75%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. ExPASy TrEMBL
Match: A0A0A0LYC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.8e-27 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. ExPASy TrEMBL
Match: A0A5D3CLT3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00190 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 5.5e-24 Identity = 55/62 (88.71%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. ExPASy TrEMBL
Match: A0A1S3C8S8 (uncharacterized protein LOC103498267 OS=Cucumis melo OX=3656 GN=LOC103498267 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 5.5e-24 Identity = 55/62 (88.71%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. ExPASy TrEMBL
Match: A0A6J1CN74 (uncharacterized protein LOC111012670 OS=Momordica charantia OX=3673 GN=LOC111012670 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 8.8e-22 Identity = 52/64 (81.25%), Postives = 60/64 (93.75%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. ExPASy TrEMBL
Match: A0A6J1K2P5 (uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21 Identity = 48/62 (77.42%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of CsaV3_1G046330 vs. TAIR 10
Match: AT1G31175.1 (unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.8 bits (203), Expect = 1.4e-16 Identity = 34/48 (70.83%), Postives = 43/48 (89.58%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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