CsaV3_1G043870 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G043870
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 29029481 .. 29029786 (+)
RNA-Seq ExpressionCsaV3_1G043870
SyntenyCsaV3_1G043870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAGAGAAATATTAAACCTACACATGTAATCCAAGAGCAATCTTGGTGCTTGTTTGGCCGAGATGAAGGACAAAAGCTTAAGAAGTTGGAACCTCAAGCAATCTCGAGCTCGAGTCTAACCGGAATTGAAAATAAAGAAGAAAATTTGAAGGATCTCAGGGTTGTGCCGATCGAGATTGAAGACAGGAAAAGGTTTAATAAGGGAACTCAAAATGATCTTGGACCTATTCCGACCGAGAGAATTATAATTTATCTATTTCGTATAGTTGAAATCCAGGTGTCATGGCATGCAAAAACTTAG

mRNA sequence

ATGGCTAAGAGAAATATTAAACCTACACATGTAATCCAAGAGCAATCTTGGTGCTTGTTTGGCCGAGATGAAGGACAAAAGCTTAAGAAGTTGGAACCTCAAGCAATCTCGAGCTCGAGTCTAACCGGAATTGAAAATAAAGAAGAAAATTTGAAGGATCTCAGGGTTGTGCCGATCGAGATTGAAGACAGGAAAAGGTTTAATAAGGGAACTCAAAATGATCTTGGACCTATTCCGACCGAGAGAATTATAATTTATCTATTTCGTATAGTTGAAATCCAGGTGTCATGGCATGCAAAAACTTAG

Coding sequence (CDS)

ATGGCTAAGAGAAATATTAAACCTACACATGTAATCCAAGAGCAATCTTGGTGCTTGTTTGGCCGAGATGAAGGACAAAAGCTTAAGAAGTTGGAACCTCAAGCAATCTCGAGCTCGAGTCTAACCGGAATTGAAAATAAAGAAGAAAATTTGAAGGATCTCAGGGTTGTGCCGATCGAGATTGAAGACAGGAAAAGGTTTAATAAGGGAACTCAAAATGATCTTGGACCTATTCCGACCGAGAGAATTATAATTTATCTATTTCGTATAGTTGAAATCCAGGTGTCATGGCATGCAAAAACTTAG

Protein sequence

MAKRNIKPTHVIQEQSWCLFGRDEGQKLKKLEPQAISSSSLTGIENKEENLKDLRVVPIEIEDRKRFNKGTQNDLGPIPTERIIIYLFRIVEIQVSWHAKT*
Homology
[Close]
BLAST of CsaV3_1G043870 vs. NCBI nr
Match: KGN66594.1 (hypothetical protein Csa_006983 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 2.3e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAKRNIKPTHVIQEQSWCLFGRDEGQKLKKLEPQAISSSSLTGIENKEENLKDLRVVPIE 60
           MAKRNIKPTHVIQEQSWCLFGRDEGQKLKKLEPQAISSSSLTGIENKEENLKDLRVVPIE
Sbjct: 1   MAKRNIKPTHVIQEQSWCLFGRDEGQKLKKLEPQAISSSSLTGIENKEENLKDLRVVPIE 60

Query: 61  IEDRKRFNKGTQNDLGPIPTERIIIYLFRIVEIQVSWHAKT 102
           IEDRKRFNKGTQNDLGPIPTERIIIYLFRIVEIQVSWHAKT
Sbjct: 61  IEDRKRFNKGTQNDLGPIPTERIIIYLFRIVEIQVSWHAKT 101

[Close]
BLAST of CsaV3_1G043870 vs. ExPASy TrEMBL
Match: A0A0A0LZY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G637430 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAKRNIKPTHVIQEQSWCLFGRDEGQKLKKLEPQAISSSSLTGIENKEENLKDLRVVPIE 60
           MAKRNIKPTHVIQEQSWCLFGRDEGQKLKKLEPQAISSSSLTGIENKEENLKDLRVVPIE
Sbjct: 1   MAKRNIKPTHVIQEQSWCLFGRDEGQKLKKLEPQAISSSSLTGIENKEENLKDLRVVPIE 60

Query: 61  IEDRKRFNKGTQNDLGPIPTERIIIYLFRIVEIQVSWHAKT 102
           IEDRKRFNKGTQNDLGPIPTERIIIYLFRIVEIQVSWHAKT
Sbjct: 61  IEDRKRFNKGTQNDLGPIPTERIIIYLFRIVEIQVSWHAKT 101

The following BLAST results are available for this feature:
BLAST of CsaV3_1G043870 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66594.12.3e-50100.00hypothetical protein Csa_006983 [Cucumis sativus][more]
BLAST of CsaV3_1G043870 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G043870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZY71.1e-50100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G637430 PE=4 SV=1[more]
BLAST of CsaV3_1G043870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G043870.1CsaV3_1G043870.1mRNA