CsaV3_1G042180 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G042180
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative
Location	chr1: 26990410 .. 26992137 (-)
RNA-Seq Expression	CsaV3_1G042180
Synteny	CsaV3_1G042180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATATCAAACTTTAACGATTAAATTTTAGCTCTCTTAAAACATCTCGACAAAGATGACGACAAACAAAAAAAACACACACACACAAAGACACCCCATCCTTTCATAAGAAGACACACTATCCTTTCACATGACAAAAAATGGCAAATTGATAAATGCAAAGAATCATTTACCATCAACCCATTCCCTCTCTTTTCAACACCTTTGTTTCTCCGCTTCTTTCTTCACCTTCAAGTTCAGTGTTAAAGTCTCACTCAAAATCACATAACACACCAAATCATCCCATCTTCCTCTCTTTTTCTCTTCACCATTTCCATGGCTTCTGCTTTATCAACTTTCTCTTTCATCTGCAACTTTCTTCTCCTTCTAGCTTCTTTTTCTGCCTCAGACATAGACCAAGATAGAACAGACTGCTCCGACCAACTCATCGGCCTCGCACAGTGCTTGCCGTATGTCAGCGGTGATGCCAAGACACCAACCATTGATTGCTGCAGTGGATTGAAACAGGTGGTGCAGAAGAGCAAGAAGTGTCTATGTGTTCTTATTAAAGACAAAGATGACCCTAATCTTGGCCTTAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTCATGCCTGCCATGCCCCAGCCAACATCACCGAGTGCATCTGTAAGCAAACTAATCCCTTGCCTTTTTTTCTCTCTCTCTCTCTGTTTTGTTATATCAATGATATCTCATAGACTCTTGGTATACTACAAAAAATTGGAGCTTAATGAATTCATGTTGTCTCCTTAGTTTGAAGAGTAGTTGTGATCTCTTAAGTAGAACAAATACATTTCTTATGGAAGCAACACATCCTTGGTTTTCATAGATGATAGGAGAGAAGTACCAGTAGTTCCAATTTGAAGAAGAGACTATTTATAGATTAATTTATCATTGTCCGAACAGTCGTGTCTCTTCTTGACGTTGGTTAATAATTTAACAGACATGTTCATCCAAGAAAGAATGCAACTCATGGAATTTTCTAAAACATACTTTTCACTTGGGCATTTTTCTCAAACATTTATATGTACACAAGTTTGATGGCCATTCACTTGTATTTCTCAATTGGGCATTGAGTGCTTCCGTTCCGTTTACACAAATTTCTTGGATTTAAAGCGTTTTGTCAAATACCTTAGCTTCTGGGCATCTAACGTTGTGTTCTGGATATGGTTTTTCAGCTCTTTTACACTTATCACCAAATTCAACAGAAGCAAAGATATTCAAAGAATCTAATCCCACCAGTGAACCCAGCAGTTCTCCAGACACTAAAGGTAAAAACCAAATTTATAAACTCTATCTAACTTAAATTTAAAAGAACGTATCATTCATTATTACCTTAGTGTGAGTAAATTTTTATGTACAGTTCATGGGAGTTCGTCCGTTGCAAACGAGAAAAGCGACGGTGGAATGGGGAAGAGATGGATTGGAGGAACAGAGATGATTGTGAAGATTTTGCTAGGATTCTTCATTTTGTCGCATCTTAATCTAATGTTCATCTAAACATAGCAGAACGAAACTGTTTGTAATTTAGGAGGGTTTCTTGCTTCATCCTTCAACATGTTATGCCAGTTTTCTTATATTGTTCAGAACAGAATATAAGAGGAATTTCAAGTTTTTTCTTTCCCTTAAAATTTCCATGGAATCCAGACTCTATACAAATTCTATCATTTCAAGAATGTGTTTTACATGCCTCTTTACCAAAATCTT

mRNA sequence

ATGGCTTCTGCTTTATCAACTTTCTCTTTCATCTGCAACTTTCTTCTCCTTCTAGCTTCTTTTTCTGCCTCAGACATAGACCAAGATAGAACAGACTGCTCCGACCAACTCATCGGCCTCGCACAGTGCTTGCCGTATGTCAGCGGTGATGCCAAGACACCAACCATTGATTGCTGCAGTGGATTGAAACAGGTGGTGCAGAAGAGCAAGAAGTGTCTATGTGTTCTTATTAAAGACAAAGATGACCCTAATCTTGGCCTTAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTCATGCCTGCCATGCCCCAGCCAACATCACCGAGTGCATCTCTCTTTTACACTTATCACCAAATTCAACAGAAGCAAAGATATTCAAAGAATCTAATCCCACCAGTGAACCCAGCAGTTCTCCAGACACTAAAGTTCATGGGAGTTCGTCCGTTGCAAACGAGAAAAGCGACGGTGGAATGGGGAAGAGATGGATTGGAGGAACAGAGATGATTGTGAAGATTTTGCTAGGATTCTTCATTTTGTCGCATCTTAATCTAATGTTCATCTAA

Coding sequence (CDS)

ATGGCTTCTGCTTTATCAACTTTCTCTTTCATCTGCAACTTTCTTCTCCTTCTAGCTTCTTTTTCTGCCTCAGACATAGACCAAGATAGAACAGACTGCTCCGACCAACTCATCGGCCTCGCACAGTGCTTGCCGTATGTCAGCGGTGATGCCAAGACACCAACCATTGATTGCTGCAGTGGATTGAAACAGGTGGTGCAGAAGAGCAAGAAGTGTCTATGTGTTCTTATTAAAGACAAAGATGACCCTAATCTTGGCCTTAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTCATGCCTGCCATGCCCCAGCCAACATCACCGAGTGCATCTCTCTTTTACACTTATCACCAAATTCAACAGAAGCAAAGATATTCAAAGAATCTAATCCCACCAGTGAACCCAGCAGTTCTCCAGACACTAAAGTTCATGGGAGTTCGTCCGTTGCAAACGAGAAAAGCGACGGTGGAATGGGGAAGAGATGGATTGGAGGAACAGAGATGATTGTGAAGATTTTGCTAGGATTCTTCATTTTGTCGCATCTTAATCTAATGTTCATCTAA

Protein sequence

MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILSHLNLMFI*

Homology

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BLAST of CsaV3_1G042180 vs. NCBI nr
Match: XP_004144111.1 (protein YLS3 isoform X1 [Cucumis sativus] >KGN66415.1 hypothetical protein Csa_007242 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 7.0e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60
           MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of CsaV3_1G042180 vs. NCBI nr
Match: XP_008451096.1 (PREDICTED: protein YLS3-like [Cucumis melo] >KAA0055642.1 protein YLS3-like [Cucumis melo var. makuwa] >TYK09896.1 protein YLS3-like [Cucumis melo var. makuwa])

HSP 1 Score: 354.4 bits (908), Expect = 6.2e-94
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60
           MAS L+TFSFICNFLLLLASF+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSS ANEKSDGGMGKRWIGGTEMI+KILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of CsaV3_1G042180 vs. NCBI nr
Match: XP_038878589.1 (non-specific lipid transfer protein GPI-anchored 6-like [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 8.6e-88
Identity = 170/187 (90.91%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60
           MAS L+ FS  CNFLLLLASF+AS+IDQDRT+CSDQL GLA CLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLAAFSLFCNFLLLLASFAASNIDQDRTECSDQLTGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP+ CHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNDCHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180
           TEAKIFKESNPTS PSSSPDTKVHGSSS ANEKSDGGMGKRWIG TEMI+ ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSGPSSSPDTKVHGSSSTANEKSDGGMGKRWIGSTEMIMGILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of CsaV3_1G042180 vs. NCBI nr
Match: XP_023515387.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.1 bits (749), Expect = 1.7e-75
Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 5   LSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQ 64
           ++ F F    LLLLA F+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAK 124
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 125 IFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILSHLN- 184
           IFKESN TSEPSS+PD+KVHGSSS ANEKSDGG  K+ IGG  MI++ILLGFFILSHLN 
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSSSTANEKSDGGTRKKPIGGAGMIMEILLGFFILSHLNS 180

Query: 185 LMFI 188
           L FI
Sbjct: 181 LKFI 184

[Close]

BLAST of CsaV3_1G042180 vs. NCBI nr
Match: XP_022960972.1 (protein YLS3-like [Cucurbita moschata] >KAG6590243.1 Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023884.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.7 bits (748), Expect = 2.2e-75
Identity = 152/184 (82.61%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 5   LSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQ 64
           ++ F F    LLLLA F+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAK 124
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 125 IFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILSHL-N 184
           IFKESN TSEPSS+PD+KVHGS+S ANEKSDGG  K+ IGG  MI++ILLGFFILSHL N
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSASTANEKSDGGTSKKPIGGAGMIMEILLGFFILSHLNN 180

Query: 185 LMFI 188
           L FI
Sbjct: 181 LKFI 184

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BLAST of CsaV3_1G042180 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35
Identity = 79/164 (48.17%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 17  LLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           +L  F  SD+ QDR +C++QLI L+ C+PYV GDAK PT DCC+G  QV++KS+KC+C+L
Sbjct: 17  MLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCIL 76

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPA-NITECISLLHLSPNSTEAKIFKESNPTSEP 136
           ++DKDDP LG+KIN +LA  LP ACH  A NIT+CIS+LHL  NST AK F+      + 
Sbjct: 77  VRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN 136

Query: 137 -SSSPDTKVH----GSSSVANEKSDGGMGKRWIGGTEMIVKILL 175
            +S+  T++H    G       KS+G   K W+ G E+++ +L+
Sbjct: 137 YNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWL-GVELLIYLLV 179

[Close]

BLAST of CsaV3_1G042180 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-34
Identity = 78/185 (42.16%), Postives = 118/185 (63.78%), Query Frame = 0


Query: 22  SASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVLIKDKD 81
           +A D  +D+ +C++QL+G+A CLPYV G AK+PT DCCSGLKQV+  +KKCLCV+I+D++
Sbjct: 24  AADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRN 83

Query: 82  DPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIF-------KESNPTSE 141
           DP+LGL+IN SLALALP  CHA A++T+C +LLHL PNS +A++F        ++ P S 
Sbjct: 84  DPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKGLNKTGPASA 143

Query: 142 P-------------SSSPDTKVHG-SSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 186
           P             S S D    G ++SV          K+W+G     ++++  FF++ 
Sbjct: 144 PTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG-----LEVVFHFFVIF 203

[Close]

BLAST of CsaV3_1G042180 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32
Identity = 74/190 (38.95%), Postives = 116/190 (61.05%), Query Frame = 0


Query: 17  LLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           ++   + +D  +D+ +C+ QL+G+A CLPYV G AK+PT DCCSGLKQV+    KCLC++
Sbjct: 20  MVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMI 79

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKE-------- 136
           I++++DP+LGL++N SLALALP  CHA A+IT+C +LLHL PNS +A++F +        
Sbjct: 80  IQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNET 139

Query: 137 ----------SNPT---SEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLG 186
                     S PT   S P SS       ++SV          K+W+G     ++++  
Sbjct: 140 VSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLG-----LEVVAH 199

[Close]

BLAST of CsaV3_1G042180 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-24
Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 24  SDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQK--SKKCLCVLIKDKD 83
           S++ QD   C D +  L  CLP+V+  AK P   CCS LK  + K  ++KCLC L+KD+D
Sbjct: 29  SELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRKCLCTLVKDRD 88

Query: 84  DPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKESNPTSEPSSSPDT 143
           DP LG K++ + A++LP ACH PANI++C  LLHL P+S  ++IFK+   +S       +
Sbjct: 89  DPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQFTESS-------S 148

Query: 144 KVHGSSSVANEKSDGGMGKRWIG 165
           +  G  +V+   S  G   +  G
Sbjct: 149 QTVGHKAVSTSSSIKGRDNKQFG 164

[Close]

BLAST of CsaV3_1G042180 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.5e-10
Identity = 30/89 (33.71%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 14  FLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCL 73
           FL +  +  +S +   ++ C++ LI ++ CL Y++G++ +P   CC+ L +VVQ S  CL
Sbjct: 9   FLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCL 68

Query: 74  CVLIKDKDDPNLGLKINGSLALALPHACH 103
           C ++ +     LG+ +N + AL LP AC+
Sbjct: 69  CQVL-NGGGSQLGINVNQTQALGLPRACN 96

[Close]

BLAST of CsaV3_1G042180 vs. ExPASy TrEMBL
Match: A0A0A0LX07 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G602030 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.4e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60
           MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of CsaV3_1G042180 vs. ExPASy TrEMBL
Match: A0A5A7UIG8 (Protein YLS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00060 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60
           MAS L+TFSFICNFLLLLASF+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSS ANEKSDGGMGKRWIGGTEMI+KILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of CsaV3_1G042180 vs. ExPASy TrEMBL
Match: A0A1S3BRH1 (protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103492476 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60
           MAS L+TFSFICNFLLLLASF+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSS ANEKSDGGMGKRWIGGTEMI+KILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of CsaV3_1G042180 vs. ExPASy TrEMBL
Match: A0A6J1H8W0 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111461612 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.1e-75
Identity = 152/184 (82.61%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 5   LSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQ 64
           ++ F F    LLLLA F+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAK 124
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 125 IFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILSHL-N 184
           IFKESN TSEPSS+PD+KVHGS+S ANEKSDGG  K+ IGG  MI++ILLGFFILSHL N
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSASTANEKSDGGTSKKPIGGAGMIMEILLGFFILSHLNN 180

Query: 185 LMFI 188
           L FI
Sbjct: 181 LKFI 184

[Close]

BLAST of CsaV3_1G042180 vs. ExPASy TrEMBL
Match: A0A6J1JIZ5 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111485523 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.4e-75
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 5   LSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQ 64
           ++ F F    LLLLA F+ S+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAVSNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAK 124
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 125 IFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILSHLN- 184
           IFKESN TSEPSS+PD+KVHGSSS ANEKSDGG  K+ IGG  MI++ILLGFFILSHLN 
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSSSTANEKSDGGTRKKPIGGVGMIMEILLGFFILSHLNS 180

Query: 185 LMFI 188
           L FI
Sbjct: 181 LKFI 184

[Close]

BLAST of CsaV3_1G042180 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 4.3e-37
Identity = 79/161 (49.07%), Postives = 111/161 (68.94%), Query Frame = 0


Query: 17  LLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           +L  F  SD+ QDR +C++QLI L+ C+PYV GDAK PT DCC+G  QV++KS+KC+C+L
Sbjct: 60  MLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCIL 119

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPA-NITECISLLHLSPNSTEAKIFKESNPTSEP 136
           ++DKDDP LG+KIN +LA  LP ACH  A NIT+CIS+LHL  NST AK F+      + 
Sbjct: 120 VRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN 179

Query: 137 -SSSPDTKVH-GSSSVANEKSDGGMGKRWIGGTEMIVKILL 175
            +S+  T++H G       KS+G   K W+ G E+++ +L+
Sbjct: 180 YNSTSPTQIHKGGGKAEPVKSNGWKEKSWL-GVELLIYLLV 219

[Close]

BLAST of CsaV3_1G042180 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 9.6e-37
Identity = 79/164 (48.17%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 17  LLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           +L  F  SD+ QDR +C++QLI L+ C+PYV GDAK PT DCC+G  QV++KS+KC+C+L
Sbjct: 60  MLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCIL 119

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPA-NITECISLLHLSPNSTEAKIFKESNPTSEP 136
           ++DKDDP LG+KIN +LA  LP ACH  A NIT+CIS+LHL  NST AK F+      + 
Sbjct: 120 VRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN 179

Query: 137 -SSSPDTKVH----GSSSVANEKSDGGMGKRWIGGTEMIVKILL 175
            +S+  T++H    G       KS+G   K W+ G E+++ +L+
Sbjct: 180 YNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWL-GVELLIYLLV 222

[Close]

BLAST of CsaV3_1G042180 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 146.0 bits (367), Expect = 3.1e-35
Identity = 78/185 (42.16%), Postives = 118/185 (63.78%), Query Frame = 0


Query: 22  SASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVLIKDKD 81
           +A D  +D+ +C++QL+G+A CLPYV G AK+PT DCCSGLKQV+  +KKCLCV+I+D++
Sbjct: 24  AADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRN 83

Query: 82  DPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIF-------KESNPTSE 141
           DP+LGL+IN SLALALP  CHA A++T+C +LLHL PNS +A++F        ++ P S 
Sbjct: 84  DPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKGLNKTGPASA 143

Query: 142 P-------------SSSPDTKVHG-SSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 186
           P             S S D    G ++SV          K+W+G     ++++  FF++ 
Sbjct: 144 PTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG-----LEVVFHFFVIF 203

[Close]

BLAST of CsaV3_1G042180 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 74/190 (38.95%), Postives = 116/190 (61.05%), Query Frame = 0


Query: 17  LLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           ++   + +D  +D+ +C+ QL+G+A CLPYV G AK+PT DCCSGLKQV+    KCLC++
Sbjct: 20  MVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMI 79

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKE-------- 136
           I++++DP+LGL++N SLALALP  CHA A+IT+C +LLHL PNS +A++F +        
Sbjct: 80  IQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNET 139

Query: 137 ----------SNPT---SEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLG 186
                     S PT   S P SS       ++SV          K+W+G     ++++  
Sbjct: 140 VSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLG-----LEVVAH 199

[Close]

BLAST of CsaV3_1G042180 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-25
Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 24  SDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCSGLKQVVQK--SKKCLCVLIKDKD 83
           S++ QD   C D +  L  CLP+V+  AK P   CCS LK  + K  ++KCLC L+KD+D
Sbjct: 29  SELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRKCLCTLVKDRD 88

Query: 84  DPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKESNPTSEPSSSPDT 143
           DP LG K++ + A++LP ACH PANI++C  LLHL P+S  ++IFK+   +S       +
Sbjct: 89  DPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQFTESS-------S 148

Query: 144 KVHGSSSVANEKSDGGMGKRWIG 165
           +  G  +V+   S  G   +  G
Sbjct: 149 QTVGHKAVSTSSSIKGRDNKQFG 164

The following BLAST results are available for this feature:

BLAST of CsaV3_1G042180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144111.1	7.0e-98	100.00	protein YLS3 isoform X1 [Cucumis sativus] >KGN66415.1 hypothetical protein Csa_0...	[more]
XP_008451096.1	6.2e-94	95.72	PREDICTED: protein YLS3-like [Cucumis melo] >KAA0055642.1 protein YLS3-like [Cuc...	[more]
XP_038878589.1	8.6e-88	90.91	non-specific lipid transfer protein GPI-anchored 6-like [Benincasa hispida]	[more]
XP_023515387.1	1.7e-75	83.15	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960972.1	2.2e-75	82.61	protein YLS3-like [Cucurbita moschata] >KAG6590243.1 Protein YLS3, partial [Cucu...	[more]

BLAST of CsaV3_1G042180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I082	1.4e-35	48.17	Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=37...	[more]
O64865	4.4e-34	42.16	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
O64864	1.8e-32	38.95	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]
Q9M2G1	1.8e-24	40.56	Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3...	[more]
Q9LJ86	7.5e-10	33.71	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CsaV3_1G042180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX07	3.4e-98	100.00	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G602030 PE=4 SV...	[more]
A0A5A7UIG8	3.0e-94	95.72	Protein YLS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G000...	[more]
A0A1S3BRH1	3.0e-94	95.72	protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103492476 PE=3 SV=1	[more]
A0A6J1H8W0	1.1e-75	82.61	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111461612 PE=3 SV=1	[more]
A0A6J1JIZ5	2.4e-75	82.61	protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111485523 PE=3 SV=1	[more]

BLAST of CsaV3_1G042180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55260.2	4.3e-37	49.07	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.1	9.6e-37	48.17	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44300.1	3.1e-35	42.16	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44290.1	1.3e-33	38.95	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G58550.1	1.3e-25	40.56	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 33..110 e-value: 7.8E-5 score: 32.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 18..110 e-value: 1.2E-13 score: 51.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 30..110 e-value: 1.3E-13 score: 52.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 31..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..153
None	No IPR available	PANTHER	PTHR33044:SF194	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 10..174
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 40..102 e-value: 1.03707E-16 score: 68.9926
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 10..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G042180.1	CsaV3_1G042180.1	mRNA