
CsaV3_1G042170 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGATTGAAAAATTAAATAAAACTATCAATTATAATAGGAATATTTATAAAATTGATTAAGTTTGAGGAGAGTTTGGTTGAAAAATTGTGTTAGAATGTTGAGGTAATAGATAAGTTATTTTAAAGGAGAAAAAAGAAAAAGGAAAAAGAGAATCTCAAGAAAGTCATTCACGTTTTCTTTACGTTGTCATTCCCAAAGCCTACAGAAAAAAGGAAAAAAAACCCCAACTTTCCTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTCCTTCTCCTTTTTCCATCTTTCATTTCTCCGATTCAAATTTTCTCAACAAATTTCTCCAATTTCCCCTTTCAAAATCTTCAATTAATCCACTTAATTTTGCGCCCCTTTTCTTCAATCTTCCAGTCTCAGGGTTAGCCATGTCGGCGACTCGCTTCTGGACTTCCTCCACTTTCTTCTTTCTCCTTTCCCTAACCCTAACTTCCCTTTTTCCTCTTGCCTTTTCCAACTCCGAAGGCGATGCTCTCTACACTCTCCGTCGCAGCTTCTCCGATCCCGATAACGTTCTTCAGAGTTGGGATCCTACTCTCGTCAACCCTTGTACTTGGTTCCATATCACTTGTAATCAGGATAACCGCGTTACCCGAGTGTACGGTTTTTCTTTCTTTTTTTCCTATTTCATTGCTAACTGTTTTCTTTATTTAGAATACTCTTGTTTTTTGTATTTTATTATACGGGTTGTTTGTAAAATTTGACGAATTGTAATACTTACTCTTGTTTTTTGTATTTTATTATATGGGTTGTTTGTGAAATTTGACGAATTGTAATATTTCAAGAAGGAAGTGGAATTTTACCCATTTGGGTAATTGTTTGATTAGATTATTGGTTTTGATTTTCAGGGATTTGGGGAATTCTAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCATCTGCAATATTTGTATGTGGTTTCTAGTTTACTTTGCTTATGTTCTTTGAATGATAGGATTTGACAATAAATGTATACGAGTGTTTAAAATTGTTTTTTCGTAGATTTTATTTGAAAGAGATATTCATGATTTTCTTATTTATTTTTGGATAAGAAATAATTTCATCGATGAATGAAATAATTCGAAGTTTATTCAGAAGAGCACGTTAAAATGGGATTACAAAATCATACTCCAATTAGGAATAAGGTGGCAGCGGTTGAGGAGAATTGGATTAGTGCGTAGTGGTTTTGTATAGTTTCATTGACTAGCAGGAGGAACTCACGAAGTACAATGTGACCGTGGAGAATTGGATTGTTTCTCTCTCCCATGTCCCAAACTACTACCAATTTGTACTAACTCTTATACTTCCTTGTACGAGTATTTACAATCGTCCACTCTAACCCCACACAGCACAAAGTTCAGTTGCATGGGCCTCATGTTTGCATCTCTTCTATCCATTTTCCCAATTACCCGTTTCTTATCTCTCTTCATGAGGGTCTATCTAAGAGAATTTGAATAGTGTCTCCTTGCTTTCCTTGTTCATAATGTGGAAAAAAAAGAAAAAGAAAGGGCTGGTATCTAAAGCTTGTCGGATATATTAATTATACATGTGTGGATCTTCTGATTGTTGATTTTCTTAATGCTGCTGTGACTAAATATGTAGGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTATATAACAACAATATCACTGGAAGAATTCCAGTTTCTTTGGGGAAATTGAAATCTCTTGTGTTCTTGTGAGTTCCATTCACGCTACTCATATTTTTTTTAGCTTGGTTATGTTGGTTTAGATGTTTTATGTTCTTTGTTACTCCAATTTTTATTGGCTAACAGTTTTTTTTATAATTATAGATCATAATCTTACAAAAAGTTATTGTTCCATGTTTTAAAGAAAAGTATCTTTCCACTTCTACTTGGTAGTTGATGCTAGGATTGTGAAACCAATGGCTATCAATTTTGTGTTTTTGGATGGGAAGTAAAATCTGAATGAATGCTTTCTCCAGTGACCCTTTCTTTTCACAATCTTTTGTCTGAACTTTTATTTTGTTTGCAGACGGCTTAATGATAACCGATTAAATGGACCAATCCCGAGAGAACTTACTGGAGTTACAAGCCTTAAAGTTGTGTAAGTCTTTGTATACAACTCTGGTTGAAGTTTTGTGCCATGCCATGTGATTGGTTTATGATGAGATGTGTCTCCTTTGCTTCAGGGATGTCTCAAGTAATAACTTGTGTGGGACCATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAGTAGGCCTTTGAATTTTTTTCCTTCTCCATTTCTTTTCACTTACTATTTCATATTTTGAAGTGCATAAAAAGTTTATAATGCTGAGTAACTGTCTCTTGCTAACATCTATCCAAAGTGGGAAAAGAGAATAAAATGAATGATATTCTGTTTTCATCATAACATGTGGACTTCATCCCCCTTTTACTTCTGTGCTTAAATCAAAATTAGTGTCTGAAACCGACGTTGGTAGTAGATATATTTCATTATATAACTTCTCATACATGGTGTTAACTGTTCAGTAAATTATCAATAGATCCTTACCCAATTAAGGTAAGAAAATGGAAATGGCTCTACAGGTTTTATAAGTTAGGGCAATTATTTCCTATCAGAAGGTGCTACAAGAGGTCTTCCTTTCTTACAAGGCAATCTTTCTGGTTCCTAGTCTTTCTGGAACTTCTTTTTTAACTAATCACTATTCCTCCTCCCCCCTACACTTTTGCCTAACCACACAACAAATGACTAGGAGCCATTTCTCTTATTACTCAACTACCCTTCACTACTTTTGAGCTTCTAATTGGTTGGCTGGGGTAAATCTCACTATTGAGTATTGGGCCTACCACTTATATGATTGGAAGTAATGTTGGATTTGGAGACTGTGATAAAAGGCTGCAGAATTAATTCCTAAATCTTAGATACTCCATGTGCACATTGTCTGCTTGCTGTAGCATTGTTTATATTGTCGTTTACTCTTTTCTTTGAGGTCGTGATGTTAATTCTGATTCTCATGATTTCTGTCCATGTAAACAATATGCTTTGTTTCTTTCAATCCCTCTCTCCATATTCTTCCTTTTGTTTTTTCCTTTTCCCTGACAACTGACTACTAACTAATCAATAAGAAGTTATCTTTATTTCTTGTTGTATCCTTGAGCACTAGTCTCTTTTCATTTCAGAGTCTTGTATCCTTTTCCTTGAAAAAAGAAAAAACTAATGAATAAGTTTCTTTTTGATGCAGCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTATTGGGACTTGCTAGCTATGACACAAATTGCACATAGAAGGTGATGCTACAATATTTACAGCTTAAGAATGAGAAGAATAGGGTATTATGGGGGGGAGTAATAGTGTTTTTTTCACTCAAAATAGTGAATTGGATTGGGAAATACTAGAAATCTAAAATGACAGATTGGTGTATGTAAATTGTGTAATACCAAATGCTTTGGTATTTTGTAACAGTATTTTTCGACTGCCACTACATGAGTTTGTGCTAATGGTAATTCTATCAACTGTTTGTTCATCTTGTTGTCTGTTCAGTAAATACAGTAGGAGTTTAATTTTACTTTTGATTTGTCAACTTCCAAATTTTCTCATAGCTTATGGTAAACTTAATGGTATGAATAAAATCTGTTTTAGTCAATAGAATCCTATCAATCGGGTTGGTTGGGTTGGCATTTGTT ATGTCGGCGACTCGCTTCTGGACTTCCTCCACTTTCTTCTTTCTCCTTTCCCTAACCCTAACTTCCCTTTTTCCTCTTGCCTTTTCCAACTCCGAAGGCGATGCTCTCTACACTCTCCGTCGCAGCTTCTCCGATCCCGATAACGTTCTTCAGAGTTGGGATCCTACTCTCGTCAACCCTTGTACTTGGTTCCATATCACTTGTAATCAGGATAACCGCGTTACCCGAGTGGATTTGGGGAATTCTAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCATCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTATATAACAACAATATCACTGGAAGAATTCCAGTTTCTTTGGGGAAATTGAAATCTCTTGTGTTCTTACGGCTTAATGATAACCGATTAAATGGACCAATCCCGAGAGAACTTACTGGAGTTACAAGCCTTAAAGTTGTGGATGTCTCAAGTAATAACTTGTGTGGGACCATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAACTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTATTGGGACTTGCTAGCTATGACACAAATTGCACATAG ATGTCGGCGACTCGCTTCTGGACTTCCTCCACTTTCTTCTTTCTCCTTTCCCTAACCCTAACTTCCCTTTTTCCTCTTGCCTTTTCCAACTCCGAAGGCGATGCTCTCTACACTCTCCGTCGCAGCTTCTCCGATCCCGATAACGTTCTTCAGAGTTGGGATCCTACTCTCGTCAACCCTTGTACTTGGTTCCATATCACTTGTAATCAGGATAACCGCGTTACCCGAGTGGATTTGGGGAATTCTAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCATCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTATATAACAACAATATCACTGGAAGAATTCCAGTTTCTTTGGGGAAATTGAAATCTCTTGTGTTCTTACGGCTTAATGATAACCGATTAAATGGACCAATCCCGAGAGAACTTACTGGAGTTACAAGCCTTAAAGTTGTGGATGTCTCAAGTAATAACTTGTGTGGGACCATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAACTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTATTGGGACTTGCTAGCTATGACACAAATTGCACATAG MSATRFWTSSTFFFLLSLTLTSLFPLAFSNSEGDALYTLRRSFSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPVSLGKLKSLVFLRLNDNRLNGPIPRELTGVTSLKVVDVSSNNLCGTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT* Homology
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_004144110.1 (leucine-rich repeat protein 1 [Cucumis sativus] >KGN66414.1 hypothetical protein Csa_007114 [Cucumis sativus]) HSP 1 Score: 454.9 bits (1169), Expect = 3.9e-124 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_008451095.1 (PREDICTED: somatic embryogenesis receptor kinase 1 [Cucumis melo]) HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122 Identity = 217/220 (98.64%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_038880171.1 (leucine-rich repeat protein 1 [Benincasa hispida]) HSP 1 Score: 436.8 bits (1122), Expect = 1.1e-118 Identity = 208/220 (94.55%), Postives = 215/220 (97.73%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_022929661.1 (leucine-rich repeat protein 1-like [Cucurbita moschata] >KAG6588157.1 Leucine-rich repeat protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115 Identity = 204/220 (92.73%), Postives = 214/220 (97.27%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_022968251.1 (leucine-rich repeat protein 1-like [Cucurbita maxima]) HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115 Identity = 204/220 (92.73%), Postives = 214/220 (97.27%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy Swiss-Prot
Match: Q9FPJ5 (Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 8.3e-101 Identity = 175/208 (84.13%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy Swiss-Prot
Match: Q6NQP4 (Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 1.6e-96 Identity = 168/205 (81.95%), Postives = 185/205 (90.24%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy Swiss-Prot
Match: B8ABC2 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=3 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 2.4e-92 Identity = 158/194 (81.44%), Postives = 174/194 (89.69%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy Swiss-Prot
Match: Q5VQP7 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 PE=1 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 2.4e-92 Identity = 158/194 (81.44%), Postives = 174/194 (89.69%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy Swiss-Prot
Match: B8BB68 (LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 2.8e-64 Identity = 120/192 (62.50%), Postives = 147/192 (76.56%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy TrEMBL
Match: A0A0A0LZF7 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G601530 PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 1.9e-124 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy TrEMBL
Match: A0A1S3BQQ4 (somatic embryogenesis receptor kinase 1 OS=Cucumis melo OX=3656 GN=LOC103492475 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 6.1e-123 Identity = 217/220 (98.64%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy TrEMBL
Match: A0A6J1HUC7 (leucine-rich repeat protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467541 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 9.5e-116 Identity = 204/220 (92.73%), Postives = 214/220 (97.27%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy TrEMBL
Match: A0A6J1ENS2 (leucine-rich repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436174 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 9.5e-116 Identity = 204/220 (92.73%), Postives = 214/220 (97.27%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. ExPASy TrEMBL
Match: A0A6J1H928 (leucine-rich repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111461611 PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 1.2e-113 Identity = 201/220 (91.36%), Postives = 211/220 (95.91%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR 10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 367.9 bits (943), Expect = 5.9e-102 Identity = 175/208 (84.13%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR 10
Match: AT3G43740.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 353.6 bits (906), Expect = 1.2e-97 Identity = 168/205 (81.95%), Postives = 185/205 (90.24%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR 10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 337.8 bits (865), Expect = 6.5e-93 Identity = 168/235 (71.49%), Postives = 185/235 (78.72%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR 10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1 ) HSP 1 Score: 238.0 bits (606), Expect = 7.1e-63 Identity = 123/203 (60.59%), Postives = 150/203 (73.89%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR 10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2 ) HSP 1 Score: 236.9 bits (603), Expect = 1.6e-62 Identity = 117/199 (58.79%), Postives = 149/199 (74.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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