CsaV3_1G041260 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G041260
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 26247098 .. 26247375 (+)
RNA-Seq ExpressionCsaV3_1G041260
SyntenyCsaV3_1G041260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAGTGTAAGAAGCTAATGAGATCCTGATTATTTTACAAACTGTCAGGCGACCCAGTTCATAGGGAGGATATCTTGTTGAGGGACTGCTATGGGGAATAGGGAAGGTGCATTAATGGCGCCACAAAGAATTGTTGTTGCTTAATGATGAAAGCTTATGGGAATGATGGAAAGGTTGCGGCAGGGAGCGGCGAAGGGTGTGCTGAATCTGAATGGTTAAGGAATGGGATGGGCCAACTTGGGGTTTGGATCTCAATACTTCAAGCCTTTACTTGA

mRNA sequence

ATGGGCAGTGGAAGGTGCATTAATGGCGCCACAAAGAATTGTTGTTGCTTAATGATGAAAGCTTATGGGAATGATGGAAAGGTTGCGGCAGGGAGCGGCGAAGGGTGTGCTGAATCTGAATGGTTAAGGAATGGGATGGGCCAACTTGGGGTTTGGATCTCAATACTTCAAGCCTTTACTTGA

Coding sequence (CDS)

ATGGGCAGTGGAAGGTGCATTAATGGCGCCACAAAGAATTGTTGTTGCTTAATGATGAAAGCTTATGGGAATGATGGAAAGGTTGCGGCAGGGAGCGGCGAAGGGTGTGCTGAATCTGAATGGTTAAGGAATGGGATGGGCCAACTTGGGGTTTGGATCTCAATACTTCAAGCCTTTACTTGA

Protein sequence

MGSGRCINGATKNCCCLMMKAYGNDGKVAAGSGEGCAESEWLRNGMGQLGVWISILQAFT*
Homology
[Close]
BLAST of CsaV3_1G041260 vs. NCBI nr
Match: KGN66321.1 (hypothetical protein Csa_006871 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MGSGRCINGATKNCCCLMMKAYGNDGKVAAGSGEGCAESEWLRNGMGQLGVWISILQAFT 60
          MGSGRCINGATKNCCCLMMKAYGNDGKVAAGSGEGCAESEWLRNGMGQLGVWISILQAFT
Sbjct: 1  MGSGRCINGATKNCCCLMMKAYGNDGKVAAGSGEGCAESEWLRNGMGQLGVWISILQAFT 60

[Close]
BLAST of CsaV3_1G041260 vs. ExPASy TrEMBL
Match: A0A0A0M287 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597190 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.0e-28
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MGSGRCINGATKNCCCLMMKAYGNDGKVAAGSGEGCAESEWLRNGMGQLGVWISILQAFT 60
          MGSGRCINGATKNCCCLMMKAYGNDGKVAAGSGEGCAESEWLRNGMGQLGVWISILQAFT
Sbjct: 1  MGSGRCINGATKNCCCLMMKAYGNDGKVAAGSGEGCAESEWLRNGMGQLGVWISILQAFT 60

The following BLAST results are available for this feature:
BLAST of CsaV3_1G041260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66321.11.2e-27100.00hypothetical protein Csa_006871 [Cucumis sativus][more]
BLAST of CsaV3_1G041260 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G041260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M2876.0e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597190 PE=4 SV=1[more]
BLAST of CsaV3_1G041260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G041260.1CsaV3_1G041260.1mRNA