
CsaV3_1G040610 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGATTTCAACTCCAATTCATACCCAGATGGGAGAATGCAGATTCAAACCTACCATGGAACCGAATCAAGGACACCCAATGGTTCTGGCGCAATGGGTATGCAAGATTTTCGTTGTTACAGTGCTTCCTATGCTTCTTCTGCAAATCCAAGTCGAACCCAGATGGGTAATGATTTGAAGCTCAAGAAAGGAAAATCGACGAATGGATTCTCATCCAAGAGTTGGAGTTTCAACGATCCGGAGATGCAGAGAAAGAGGAGAGTTGCTAGCTATAAAGTTTATTCTGTGGAAGGCAAAGTTAAAGGGTCTCTAAGAAAAAGCTTCCGATGGCTTAAGGAAAGATGCTCTCGAGTTGTTTTTGGATGGTAG ATGGACGATTTCAACTCCAATTCATACCCAGATGGGAGAATGCAGATTCAAACCTACCATGGAACCGAATCAAGGACACCCAATGGTTCTGGCGCAATGGGTATGCAAGATTTTCGTTGTTACAGTGCTTCCTATGCTTCTTCTGCAAATCCAAGTCGAACCCAGATGGGTAATGATTTGAAGCTCAAGAAAGGAAAATCGACGAATGGATTCTCATCCAAGAGTTGGAGTTTCAACGATCCGGAGATGCAGAGAAAGAGGAGAGTTGCTAGCTATAAAGTTTATTCTGTGGAAGGCAAAGTTAAAGGGTCTCTAAGAAAAAGCTTCCGATGGCTTAAGGAAAGATGCTCTCGAGTTGTTTTTGGATGGTAG ATGGACGATTTCAACTCCAATTCATACCCAGATGGGAGAATGCAGATTCAAACCTACCATGGAACCGAATCAAGGACACCCAATGGTTCTGGCGCAATGGGTATGCAAGATTTTCGTTGTTACAGTGCTTCCTATGCTTCTTCTGCAAATCCAAGTCGAACCCAGATGGGTAATGATTTGAAGCTCAAGAAAGGAAAATCGACGAATGGATTCTCATCCAAGAGTTGGAGTTTCAACGATCCGGAGATGCAGAGAAAGAGGAGAGTTGCTAGCTATAAAGTTTATTCTGTGGAAGGCAAAGTTAAAGGGTCTCTAAGAAAAAGCTTCCGATGGCTTAAGGAAAGATGCTCTCGAGTTGTTTTTGGATGGTAG MDDFNSNSYPDGRMQIQTYHGTESRTPNGSGAMGMQDFRCYSASYASSANPSRTQMGNDLKLKKGKSTNGFSSKSWSFNDPEMQRKRRVASYKVYSVEGKVKGSLRKSFRWLKERCSRVVFGW* Homology
BLAST of CsaV3_1G040610 vs. NCBI nr
Match: XP_004144117.1 (uncharacterized protein LOC101207995 [Cucumis sativus] >KGN66259.1 hypothetical protein Csa_007550 [Cucumis sativus]) HSP 1 Score: 253.8 bits (647), Expect = 7.5e-64 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. NCBI nr
Match: XP_008450877.1 (PREDICTED: uncharacterized protein LOC103492339 [Cucumis melo] >KAA0055810.1 uncharacterized protein E6C27_scaffold181G002000 [Cucumis melo var. makuwa] >TYK10061.1 uncharacterized protein E5676_scaffold16G001950 [Cucumis melo var. makuwa]) HSP 1 Score: 244.6 bits (623), Expect = 4.5e-61 Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. NCBI nr
Match: XP_038878627.1 (uncharacterized protein LOC120070815 [Benincasa hispida]) HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58 Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. NCBI nr
Match: XP_022933710.1 (uncharacterized protein LOC111441046 [Cucurbita moschata] >XP_022933711.1 uncharacterized protein LOC111441046 [Cucurbita moschata] >XP_022968547.1 uncharacterized protein LOC111467745 [Cucurbita maxima] >XP_022968557.1 uncharacterized protein LOC111467745 [Cucurbita maxima] >XP_023531244.1 uncharacterized protein LOC111793547 [Cucurbita pepo subsp. pepo] >XP_023531245.1 uncharacterized protein LOC111793547 [Cucurbita pepo subsp. pepo] >KAG6588051.1 hypothetical protein SDJN03_16616, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021945.1 hypothetical protein SDJN02_15673, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 218.4 bits (555), Expect = 3.5e-53 Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. NCBI nr
Match: XP_022987910.1 (uncharacterized protein LOC111485312 [Cucurbita maxima]) HSP 1 Score: 202.2 bits (513), Expect = 2.6e-48 Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. ExPASy TrEMBL
Match: A0A0A0LYX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G589660 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 3.6e-64 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. ExPASy TrEMBL
Match: A0A5A7UKZ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001950 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.2e-61 Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. ExPASy TrEMBL
Match: A0A1S3BPN1 (uncharacterized protein LOC103492339 OS=Cucumis melo OX=3656 GN=LOC103492339 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.2e-61 Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. ExPASy TrEMBL
Match: A0A6J1HTT0 (uncharacterized protein LOC111467745 OS=Cucurbita maxima OX=3661 GN=LOC111467745 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.7e-53 Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. ExPASy TrEMBL
Match: A0A6J1EZU0 (uncharacterized protein LOC111441046 OS=Cucurbita moschata OX=3662 GN=LOC111441046 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.7e-53 Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 109.4 bits (272), Expect = 2.1e-24 Identity = 64/124 (51.61%), Postives = 75/124 (60.48%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 102.4 bits (254), Expect = 2.6e-22 Identity = 56/122 (45.90%), Postives = 78/122 (63.93%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 68.9 bits (167), Expect = 3.2e-12 Identity = 29/49 (59.18%), Postives = 42/49 (85.71%), Query Frame = 0
BLAST of CsaV3_1G040610 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 68.6 bits (166), Expect = 4.2e-12 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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