CsaV3_1G040330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G040330
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPRA1 family protein
Locationchr1: 25585055 .. 25586236 (-)
RNA-Seq ExpressionCsaV3_1G040330
SyntenyCsaV3_1G040330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGACCTATGGAACAATTCCAACCGAGCCAGTTCCTTTATCAAACCTACATTACACATCTCGGGCAAGAGAACGCATCGCATCAGCCCTCGGCAAACGAAGGCCATGGATGGAGATGATCCAGCCTCAAGATCTAAGTTTTCCCACCTCCTTTTTGCAGCTAATCAATAGAATTAAGAACAATGCTGAGTACTTTTGGACAAATTACATTCTCATCGTATTATTCATCCTCTTTCTAAGTTTGCTTTGGCAACCCATCTCATTGGTTGTCTTCATCATTTCATTTCTTGCTTGGCTTTACTTATATTTCTTACATGACGAACCATGGGTGGTTCGTGGTAGCATAGTCGACGACCAATTGGTGATGGTAGTTTTGATGCTAATCACCATAGCGTTGCTTTTGATCACAGATGCAACTATGAACATTATAATTTCAATGTTTGTTGGCGTGTTGGTCGTGTTTGTTCATGGAGCTTTAAAAGGTAGTGAGGATGCCTTCTCTTTGGATGAAGAAGGTTTATCAGAATATGGAGGTGGAAGAGGGGTTGTCAAAATGCCTCTCAAGCACGCTGCCTCCTCTTCTTTCTCTCTTTCATAGAACAAAAGCTCTTTAAACACTGTGCTTCATTTTATGGCTTTTGATGTTCCAAAAAGGCAAAGAAGTATGGGTATGTTTTGCCTTTGTAAATTTTGTTGTTTATGTTAAGTTACTTTGAGGTTAAGGTAGTGGACGGTTGATTAATTTTCCACGTGGGTTTCCATGCCCAATAGTGTTGTTTGTCTGGATTATAATTTTCTGCATTCTGTTATTTTTAACATTTTGAACCATTCCCCTCATTTCTTTTAATTTAGTCATATTAGTTGATATCAAAATTGGGGTCAAGGTTAAGTTTAGATGATTGAACATCTAATGAAGGTCTACAAGAATAAAAGAATTGTGCACAACGATACCTTTCAATGAGGTAAACGACGATGTTTTTGAGCTACAAGGATAAAAGAATTGGAGAGGCTGTCCCATGTGGGTTGACCTCAACCTCCCATTGGCGATATGACATGTATCATGAGTTTCATTTTATATCCCATGCTTGTGTTGCATGTCCTATATTCCAACTTAGCCTTCTTATGGGGATCAGACATTGTATCAGACATGAACAACTTTTCGGATGAACTCGATGCTTAG

mRNA sequence

ATGGGGACCTATGGAACAATTCCAACCGAGCCAGTTCCTTTATCAAACCTACATTACACATCTCGGGCAAGAGAACGCATCGCATCAGCCCTCGGCAAACGAAGGCCATGGATGGAGATGATCCAGCCTCAAGATCTAAGTTTTCCCACCTCCTTTTTGCAGCTAATCAATAGAATTAAGAACAATGCTGAGTACTTTTGGACAAATTACATTCTCATCGTATTATTCATCCTCTTTCTAAGTTTGCTTTGGCAACCCATCTCATTGGTTGTCTTCATCATTTCATTTCTTGCTTGGCTTTACTTATATTTCTTACATGACGAACCATGGGTGGTTCGTGGTAGCATAGTCGACGACCAATTGGTGATGGTAGTTTTGATGCTAATCACCATAGCGTTGCTTTTGATCACAGATGCAACTATGAACATTATAATTTCAATGTTTGTTGGCGTGTTGGTCGTGTTTGTTCATGGAGCTTTAAAAGGTAGTGAGGATGCCTTCTCTTTGGATGAAGAAGGTTTATCAGAATATGGAGCCTTCTTATGGGGATCAGACATTGTATCAGACATGAACAACTTTTCGGATGAACTCGATGCTTAG

Coding sequence (CDS)

ATGGGGACCTATGGAACAATTCCAACCGAGCCAGTTCCTTTATCAAACCTACATTACACATCTCGGGCAAGAGAACGCATCGCATCAGCCCTCGGCAAACGAAGGCCATGGATGGAGATGATCCAGCCTCAAGATCTAAGTTTTCCCACCTCCTTTTTGCAGCTAATCAATAGAATTAAGAACAATGCTGAGTACTTTTGGACAAATTACATTCTCATCGTATTATTCATCCTCTTTCTAAGTTTGCTTTGGCAACCCATCTCATTGGTTGTCTTCATCATTTCATTTCTTGCTTGGCTTTACTTATATTTCTTACATGACGAACCATGGGTGGTTCGTGGTAGCATAGTCGACGACCAATTGGTGATGGTAGTTTTGATGCTAATCACCATAGCGTTGCTTTTGATCACAGATGCAACTATGAACATTATAATTTCAATGTTTGTTGGCGTGTTGGTCGTGTTTGTTCATGGAGCTTTAAAAGGTAGTGAGGATGCCTTCTCTTTGGATGAAGAAGGTTTATCAGAATATGGAGCCTTCTTATGGGGATCAGACATTGTATCAGACATGAACAACTTTTCGGATGAACTCGATGCTTAG

Protein sequence

MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIKNNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQLVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYGAFLWGSDIVSDMNNFSDELDA*
Homology
BLAST of CsaV3_1G040330 vs. NCBI nr
Match: KAE8653423.1 (hypothetical protein Csa_007244 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 1.9e-101
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK
Sbjct: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ
Sbjct: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYGAF 180
           LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYGAF
Sbjct: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYGAF 180

Query: 181 LWGSDIVSDMNNFSDELDA 200
           LWGSDIVSDMNNFSDELDA
Sbjct: 181 LWGSDIVSDMNNFSDELDA 199

BLAST of CsaV3_1G040330 vs. NCBI nr
Match: XP_004135817.1 (PRA1 family protein F2 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 1.8e-88
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK
Sbjct: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ
Sbjct: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG 179
           LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG
Sbjct: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG 178

BLAST of CsaV3_1G040330 vs. NCBI nr
Match: XP_008450846.1 (PREDICTED: PRA1 family protein C [Cucumis melo] >TYK10102.1 PRA1 family protein C [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 1.8e-83
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           MGTYGTIPTEP+P SNLHYTSRARERIASALGKRRPWMEMIQPQDLSFP+SFLQLINRI+
Sbjct: 1   MGTYGTIPTEPLPSSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPSSFLQLINRIE 60

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NNAEYFWTNYI I+LFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ
Sbjct: 61  NNAEYFWTNYIFIILFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG 179
           LVMVVLMLITIALLLITDAT NIIISMFVGVLVVFVHGALKGSEDA SLDEEGLSE G
Sbjct: 121 LVMVVLMLITIALLLITDATKNIIISMFVGVLVVFVHGALKGSEDALSLDEEGLSECG 178

BLAST of CsaV3_1G040330 vs. NCBI nr
Match: XP_038878274.1 (PRA1 family protein F2 [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.8e-76
Identity = 156/178 (87.64%), Postives = 165/178 (92.70%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           MGTYGTIPTEP PLSNLHYTSRARERIAS LG RRPWMEMIQPQDLSFP+SFLQLINRIK
Sbjct: 34  MGTYGTIPTEPAPLSNLHYTSRARERIASGLGTRRPWMEMIQPQDLSFPSSFLQLINRIK 93

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NN EYF TNYILI+LFILFL LLWQPISLVVFIIS +AWLYLYFLHDEPWVV GS+V+D+
Sbjct: 94  NNGEYFRTNYILIILFILFLCLLWQPISLVVFIISSVAWLYLYFLHDEPWVVCGSVVNDR 153

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG 179
           LV V LMLIT+ALLLITDAT NI+ISMF+GVLVVFVHGALKGSED FSLDEEGLSE G
Sbjct: 154 LVRVALMLITVALLLITDATKNIMISMFIGVLVVFVHGALKGSEDVFSLDEEGLSECG 211

BLAST of CsaV3_1G040330 vs. NCBI nr
Match: XP_022973348.1 (PRA1 family protein F2-like isoform X1 [Cucurbita maxima] >XP_022973351.1 PRA1 family protein F2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 146/176 (82.95%), Postives = 157/176 (89.20%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           M TYGTIPTEPVPLSNLH TSRARERIAS LG +RPWMEMIQ QDL+FP S  QLINRIK
Sbjct: 1   MATYGTIPTEPVPLSNLHSTSRARERIASCLGTQRPWMEMIQLQDLTFPASSKQLINRIK 60

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NNAE+FWTNYILI+LFILFLSLLWQPIS +VFIIS LAWLYLYFLHDEP+V+RG  VDD+
Sbjct: 61  NNAEFFWTNYILIILFILFLSLLWQPISFMVFIISLLAWLYLYFLHDEPFVIRGRTVDDR 120

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSE 177
           LVMVVL LIT+ALL  T AT NIIISM +GV+VVFVHGALKGSED FSLDEEGLSE
Sbjct: 121 LVMVVLTLITVALLFFTHATKNIIISMSIGVVVVFVHGALKGSEDIFSLDEEGLSE 176

BLAST of CsaV3_1G040330 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31
Identity = 81/174 (46.55%), Postives = 111/174 (63.79%), Query Frame = 0

Query: 1   MGTYGTIPT--EPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINR 60
           M  YG IPT   P P  +L Y SRA+ RI S L  RRPW  M   + ++ P  F   I+R
Sbjct: 1   MTNYGAIPTSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISR 60

Query: 61  IKNNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVD 120
           IK N  YF  NY + VLFILFLSLL+ P SL+V  I  + W++LYFL DEP VV G  +D
Sbjct: 61  IKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQID 120

Query: 121 DQLVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEE 173
           D+ V++ L ++T+ +LL+T AT NI+ S+    ++V +H A++ S++ F LDEE
Sbjct: 121 DRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLF-LDEE 173

BLAST of CsaV3_1G040330 vs. ExPASy Swiss-Prot
Match: Q9FZ63 (PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-27
Identity = 71/174 (40.80%), Postives = 105/174 (60.34%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLS-NLHYTSRA-RERIASALGKRRPWMEMIQPQDLSFPTSFLQLINR 60
           M TYGT       L+  L Y +R   +   S L  RRPW +M+     +FP     +I R
Sbjct: 1   MTTYGTNQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITR 60

Query: 61  IKNNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVD 120
           I+ N  YF TNY ++VLF +FLSL+W P SL+V +    AWL+LYFL DEP  V    +D
Sbjct: 61  IRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREID 120

Query: 121 DQLVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEE 173
            ++V++++ +IT+++L +TDA +NI +++  G L V  H A++ +ED F  DEE
Sbjct: 121 HRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEE 174

BLAST of CsaV3_1G040330 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.2e-27
Identity = 70/174 (40.23%), Postives = 104/174 (59.77%), Query Frame = 0

Query: 1   MGTYGTIPT--EPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINR 60
           M  YG IPT     PL ++   SRA+ RI + L  RR W  M     +  P        R
Sbjct: 1   MTNYGAIPTSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTR 60

Query: 61  IKNNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVD 120
           IK N  YF  NY ++VL ++F SL+W P SL+VF +  + W++LYFL DEP  +    +D
Sbjct: 61  IKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQID 120

Query: 121 DQLVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEE 173
           D+ V++VL ++T+ LLL+T+AT NI+ ++  G ++V +H  ++ +ED F LDEE
Sbjct: 121 DRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLF-LDEE 173

BLAST of CsaV3_1G040330 vs. ExPASy Swiss-Prot
Match: Q9LIC7 (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-23
Identity = 64/167 (38.32%), Postives = 96/167 (57.49%), Query Frame = 0

Query: 6   TIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIKNNAEY 65
           T  +   P  N    SRA++RI   L  RR W  M        P     + +RIK N  Y
Sbjct: 8   TTSSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAY 67

Query: 66  FWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQLVMVV 125
           F +NY +++L ++F SL+W P SL+VF      W++LYFL D P  V    +DD+ V++ 
Sbjct: 68  FRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIG 127

Query: 126 LMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEE 173
           L +ITI LLL+T+AT NI+ ++  G ++V +H  ++ ++D F LDEE
Sbjct: 128 LSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLF-LDEE 173

BLAST of CsaV3_1G040330 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 63/167 (37.72%), Postives = 103/167 (61.68%), Query Frame = 0

Query: 20  TSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIKNNAEYFWTNYILIVLFILF 79
           ++RA++   S +   RPW E++    LS P  + + +  +K+N  YF  NY L VL I+F
Sbjct: 33  SARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVF 92

Query: 80  LSLLWQPISLVVFIISFLAWLYLYFLHD--EPWVVRGSIVDDQLVMVVLMLITIALLLIT 139
           L L++ P+S++ FI+ F+ W+ LYF  D  +  V+ G  VDD++V+V+L L+T+  L+ T
Sbjct: 93  LGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYT 152

Query: 140 DATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYGAFLWGS 185
           D   N+++S+ +G+L+V  HGA + ++D F LDEE     G    GS
Sbjct: 153 DVGENVLVSLIIGLLIVGAHGAFRNTDDLF-LDEESARRGGLVSAGS 198

BLAST of CsaV3_1G040330 vs. ExPASy TrEMBL
Match: A0A0A0LWF7 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_1G587410 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 8.9e-89
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK
Sbjct: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ
Sbjct: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG 179
           LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG
Sbjct: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG 178

BLAST of CsaV3_1G040330 vs. ExPASy TrEMBL
Match: A0A5D3CFT6 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002440 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.7e-84
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           MGTYGTIPTEP+P SNLHYTSRARERIASALGKRRPWMEMIQPQDLSFP+SFLQLINRI+
Sbjct: 1   MGTYGTIPTEPLPSSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPSSFLQLINRIE 60

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NNAEYFWTNYI I+LFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ
Sbjct: 61  NNAEYFWTNYIFIILFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG 179
           LVMVVLMLITIALLLITDAT NIIISMFVGVLVVFVHGALKGSEDA SLDEEGLSE G
Sbjct: 121 LVMVVLMLITIALLLITDATKNIIISMFVGVLVVFVHGALKGSEDALSLDEEGLSECG 178

BLAST of CsaV3_1G040330 vs. ExPASy TrEMBL
Match: A0A1S3BR77 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103492315 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.7e-84
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           MGTYGTIPTEP+P SNLHYTSRARERIASALGKRRPWMEMIQPQDLSFP+SFLQLINRI+
Sbjct: 1   MGTYGTIPTEPLPSSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPSSFLQLINRIE 60

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NNAEYFWTNYI I+LFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ
Sbjct: 61  NNAEYFWTNYIFIILFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYG 179
           LVMVVLMLITIALLLITDAT NIIISMFVGVLVVFVHGALKGSEDA SLDEEGLSE G
Sbjct: 121 LVMVVLMLITIALLLITDATKNIIISMFVGVLVVFVHGALKGSEDALSLDEEGLSECG 178

BLAST of CsaV3_1G040330 vs. ExPASy TrEMBL
Match: A0A6J1I8E9 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111471903 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.5e-70
Identity = 146/176 (82.95%), Postives = 157/176 (89.20%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           M TYGTIPTEPVPLSNLH TSRARERIAS LG +RPWMEMIQ QDL+FP S  QLINRIK
Sbjct: 1   MATYGTIPTEPVPLSNLHSTSRARERIASCLGTQRPWMEMIQLQDLTFPASSKQLINRIK 60

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NNAE+FWTNYILI+LFILFLSLLWQPIS +VFIIS LAWLYLYFLHDEP+V+RG  VDD+
Sbjct: 61  NNAEFFWTNYILIILFILFLSLLWQPISFMVFIISLLAWLYLYFLHDEPFVIRGRTVDDR 120

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSE 177
           LVMVVL LIT+ALL  T AT NIIISM +GV+VVFVHGALKGSED FSLDEEGLSE
Sbjct: 121 LVMVVLTLITVALLFFTHATKNIIISMSIGVVVVFVHGALKGSEDIFSLDEEGLSE 176

BLAST of CsaV3_1G040330 vs. ExPASy TrEMBL
Match: A0A6J1EDQ8 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111433234 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.6e-69
Identity = 144/176 (81.82%), Postives = 157/176 (89.20%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIK 60
           M TYGTIPTEPVPLSNLH TSRARERIAS LG +RPWMEMIQ QDL+FP S  QLINRIK
Sbjct: 1   MATYGTIPTEPVPLSNLHSTSRARERIASCLGTQRPWMEMIQLQDLTFPASSKQLINRIK 60

Query: 61  NNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQ 120
           NNAE+FWTNYILI+LFILFLSLLWQPIS +VFIIS LAWLYLYFLHDEP+V+RG  VDD+
Sbjct: 61  NNAEFFWTNYILIILFILFLSLLWQPISFMVFIISLLAWLYLYFLHDEPFVIRGRAVDDR 120

Query: 121 LVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSE 177
           LVMVVL L+T+ALL  T AT NIIISM +GV++VFVHGALKGSED FSLDEEGLSE
Sbjct: 121 LVMVVLSLVTVALLFFTHATKNIIISMSIGVVMVFVHGALKGSEDIFSLDEEGLSE 176

BLAST of CsaV3_1G040330 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32
Identity = 81/174 (46.55%), Postives = 111/174 (63.79%), Query Frame = 0

Query: 1   MGTYGTIPT--EPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINR 60
           M  YG IPT   P P  +L Y SRA+ RI S L  RRPW  M   + ++ P  F   I+R
Sbjct: 1   MTNYGAIPTSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISR 60

Query: 61  IKNNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVD 120
           IK N  YF  NY + VLFILFLSLL+ P SL+V  I  + W++LYFL DEP VV G  +D
Sbjct: 61  IKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQID 120

Query: 121 DQLVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEE 173
           D+ V++ L ++T+ +LL+T AT NI+ S+    ++V +H A++ S++ F LDEE
Sbjct: 121 DRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLF-LDEE 173

BLAST of CsaV3_1G040330 vs. TAIR 10
Match: AT1G17700.1 (prenylated RAB acceptor 1.F1 )

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-28
Identity = 71/174 (40.80%), Postives = 105/174 (60.34%), Query Frame = 0

Query: 1   MGTYGTIPTEPVPLS-NLHYTSRA-RERIASALGKRRPWMEMIQPQDLSFPTSFLQLINR 60
           M TYGT       L+  L Y +R   +   S L  RRPW +M+     +FP     +I R
Sbjct: 1   MTTYGTNQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITR 60

Query: 61  IKNNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVD 120
           I+ N  YF TNY ++VLF +FLSL+W P SL+V +    AWL+LYFL DEP  V    +D
Sbjct: 61  IRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREID 120

Query: 121 DQLVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEE 173
            ++V++++ +IT+++L +TDA +NI +++  G L V  H A++ +ED F  DEE
Sbjct: 121 HRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEE 174

BLAST of CsaV3_1G040330 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-28
Identity = 70/174 (40.23%), Postives = 104/174 (59.77%), Query Frame = 0

Query: 1   MGTYGTIPT--EPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINR 60
           M  YG IPT     PL ++   SRA+ RI + L  RR W  M     +  P        R
Sbjct: 1   MTNYGAIPTSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTR 60

Query: 61  IKNNAEYFWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVD 120
           IK N  YF  NY ++VL ++F SL+W P SL+VF +  + W++LYFL DEP  +    +D
Sbjct: 61  IKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQID 120

Query: 121 DQLVMVVLMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEE 173
           D+ V++VL ++T+ LLL+T+AT NI+ ++  G ++V +H  ++ +ED F LDEE
Sbjct: 121 DRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLF-LDEE 173

BLAST of CsaV3_1G040330 vs. TAIR 10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4 )

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-24
Identity = 64/167 (38.32%), Postives = 96/167 (57.49%), Query Frame = 0

Query: 6   TIPTEPVPLSNLHYTSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIKNNAEY 65
           T  +   P  N    SRA++RI   L  RR W  M        P     + +RIK N  Y
Sbjct: 8   TTSSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAY 67

Query: 66  FWTNYILIVLFILFLSLLWQPISLVVFIISFLAWLYLYFLHDEPWVVRGSIVDDQLVMVV 125
           F +NY +++L ++F SL+W P SL+VF      W++LYFL D P  V    +DD+ V++ 
Sbjct: 68  FRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIG 127

Query: 126 LMLITIALLLITDATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEE 173
           L +ITI LLL+T+AT NI+ ++  G ++V +H  ++ ++D F LDEE
Sbjct: 128 LSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLF-LDEE 173

BLAST of CsaV3_1G040330 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 108.2 bits (269), Expect = 7.6e-24
Identity = 63/167 (37.72%), Postives = 103/167 (61.68%), Query Frame = 0

Query: 20  TSRARERIASALGKRRPWMEMIQPQDLSFPTSFLQLINRIKNNAEYFWTNYILIVLFILF 79
           ++RA++   S +   RPW E++    LS P  + + +  +K+N  YF  NY L VL I+F
Sbjct: 33  SARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVF 92

Query: 80  LSLLWQPISLVVFIISFLAWLYLYFLHD--EPWVVRGSIVDDQLVMVVLMLITIALLLIT 139
           L L++ P+S++ FI+ F+ W+ LYF  D  +  V+ G  VDD++V+V+L L+T+  L+ T
Sbjct: 93  LGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYT 152

Query: 140 DATMNIIISMFVGVLVVFVHGALKGSEDAFSLDEEGLSEYGAFLWGS 185
           D   N+++S+ +G+L+V  HGA + ++D F LDEE     G    GS
Sbjct: 153 DVGENVLVSLIIGLLIVGAHGAFRNTDDLF-LDEESARRGGLVSAGS 198

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8653423.11.9e-101100.00hypothetical protein Csa_007244 [Cucumis sativus][more]
XP_004135817.11.8e-88100.00PRA1 family protein F2 [Cucumis sativus][more]
XP_008450846.11.8e-8394.94PREDICTED: PRA1 family protein C [Cucumis melo] >TYK10102.1 PRA1 family protein ... [more]
XP_038878274.12.8e-7687.64PRA1 family protein F2 [Benincasa hispida][more]
XP_022973348.11.1e-6982.95PRA1 family protein F2-like isoform X1 [Cucurbita maxima] >XP_022973351.1 PRA1 f... [more]
Match NameE-valueIdentityDescription
Q9C8891.7e-3146.55PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1[more]
Q9FZ633.2e-2740.80PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1[more]
Q9LIC64.2e-2740.23PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1[more]
Q9LIC73.7e-2338.32PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1[more]
Q9FRR11.1e-2237.72PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LWF78.9e-89100.00PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_1G587410 PE=3 SV=1[more]
A0A5D3CFT68.7e-8494.94PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G0... [more]
A0A1S3BR778.7e-8494.94PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103492315 PE=3 SV=1[more]
A0A6J1I8E95.5e-7082.95PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111471903 PE=3 SV=1[more]
A0A6J1EDQ81.6e-6981.82PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111433234 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G55190.11.2e-3246.55PRA1 (Prenylated rab acceptor) family protein [more]
AT1G17700.12.3e-2840.80prenylated RAB acceptor 1.F1 [more]
AT3G13720.13.0e-2840.23PRA1 (Prenylated rab acceptor) family protein [more]
AT3G13710.12.6e-2438.32prenylated RAB acceptor 1.F4 [more]
AT1G08770.17.6e-2437.72prenylated RAB acceptor 1.E [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 31..170
e-value: 4.4E-40
score: 136.6
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 1..175
NoneNo IPR availablePANTHERPTHR19317:SF76PRA1 FAMILY PROTEINcoord: 1..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G040330.1CsaV3_1G040330.1mRNA