CsaV3_1G036790 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G036790
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Proton pump-interactor 1-like
Location	chr1: 22641235 .. 22641656 (+)
RNA-Seq Expression	CsaV3_1G036790
Synteny	CsaV3_1G036790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTGTACAGATCATTTAAAATCATCAATGCCTTCAAACATTTTGTCCTAATTTTTCTTTTCAAATGGTTTAATAGTATTAATTATAATTTTCTTGGTACAATCAAAATTACAGATTAAGAAGAAGAATGAGGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAAT

mRNA sequence

AAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTATTAAGAAGAAGAATGAGGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAAT

Coding sequence (CDS)

AAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTATTAAGAAGAAGAATGAGGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAAT

Protein sequence

KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN

Homology

[Close]

BLAST of CsaV3_1G036790 vs. NCBI nr
Match: KAE8653295.1 (hypothetical protein Csa_023263, partial [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 7.0e-47
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT
Sbjct: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60

Query: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN
Sbjct: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 104

[Close]

BLAST of CsaV3_1G036790 vs. NCBI nr
Match: XP_016899262.1 (PREDICTED: uncharacterized protein LOC103489454 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 2.7e-43
Identity = 94/104 (90.38%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KLKFLMQHGSKNIA+EKKLLREI+SS+KK+IR+TT+EELDVPIKKKN+EIENSHLYLYTT
Sbjct: 88  KLKFLMQHGSKNIANEKKLLREINSSKKKKIRTTTIEELDVPIKKKNDEIENSHLYLYTT 147

Query: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           DFEGIN+EMKRLEMVK+KAVANAAVGGKLWSSLGTKKDIQQ+VN
Sbjct: 148 DFEGINEEMKRLEMVKQKAVANAAVGGKLWSSLGTKKDIQQQVN 191

[Close]

BLAST of CsaV3_1G036790 vs. NCBI nr
Match: KAA0054011.1 (proton pump-interactor 1-like [Cucumis melo var. makuwa] >TYK20697.1 proton pump-interactor 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 176.8 bits (447), Expect = 9.7e-41
Identity = 89/99 (89.90%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 6   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 65
           MQHGSKNIA+EKKLLREI+SS+KK+IR+TT+EELDVPIKKKN+EIENSHLYLYTTDFEGI
Sbjct: 1   MQHGSKNIANEKKLLREINSSKKKKIRTTTIEELDVPIKKKNDEIENSHLYLYTTDFEGI 60

Query: 66  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           N+EMKRLEMVK+KAVANAAVGGKLWSSLGTKKDIQQ+VN
Sbjct: 61  NEEMKRLEMVKQKAVANAAVGGKLWSSLGTKKDIQQQVN 99

[Close]

BLAST of CsaV3_1G036790 vs. NCBI nr
Match: KAG7012544.1 (hypothetical protein SDJN02_25296, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-24
Identity = 62/103 (60.19%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KL+FL++HGSKN+A EKKLLR+I++S+K +   TT++EL+ PIK  +E+I+NSH++LY T
Sbjct: 82  KLQFLLRHGSKNMAKEKKLLRDINTSQKSKRAGTTLDELEAPIKNLDEQIKNSHMHLYRT 141

Query: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKV 104
           DFE I +E K  EM KE AVANA VGG+LWSSLG+KK +Q++V
Sbjct: 142 DFEEICREKKVHEMEKETAVANAGVGGRLWSSLGSKKHVQRQV 184

[Close]

BLAST of CsaV3_1G036790 vs. NCBI nr
Match: XP_022955118.1 (uncharacterized protein LOC111457179 isoform X2 [Cucurbita moschata])

HSP 1 Score: 119.8 bits (299), Expect = 1.4e-23
Identity = 61/103 (59.22%), Postives = 84/103 (81.55%), Query Frame = 0


Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KL+FL++HGSKN+A EKKLLR+I++S+K +   TT++EL+ PIK  +E+I+NS ++LY T
Sbjct: 82  KLQFLLRHGSKNMAKEKKLLRDINTSQKSKQAGTTLDELEAPIKNLDEQIKNSRMHLYRT 141

Query: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKV 104
           DFE I +E K  EM KE AVANA VGG+LWSSLG+KK +Q++V
Sbjct: 142 DFEEIYREKKVHEMEKETAVANAGVGGRLWSSLGSKKHVQRQV 184

[Close]

BLAST of CsaV3_1G036790 vs. ExPASy TrEMBL
Match: A0A0A0LVC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534760 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 6   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 65
           MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI
Sbjct: 1   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 60

Query: 66  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN
Sbjct: 61  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 99

[Close]

BLAST of CsaV3_1G036790 vs. ExPASy TrEMBL
Match: A0A1S4DTD6 (uncharacterized protein LOC103489454 OS=Cucumis melo OX=3656 GN=LOC103489454 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 94/104 (90.38%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KLKFLMQHGSKNIA+EKKLLREI+SS+KK+IR+TT+EELDVPIKKKN+EIENSHLYLYTT
Sbjct: 88  KLKFLMQHGSKNIANEKKLLREINSSKKKKIRTTTIEELDVPIKKKNDEIENSHLYLYTT 147

Query: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           DFEGIN+EMKRLEMVK+KAVANAAVGGKLWSSLGTKKDIQQ+VN
Sbjct: 148 DFEGINEEMKRLEMVKQKAVANAAVGGKLWSSLGTKKDIQQQVN 191

[Close]

BLAST of CsaV3_1G036790 vs. ExPASy TrEMBL
Match: A0A5D3DAS6 (Proton pump-interactor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00910 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.7e-41
Identity = 89/99 (89.90%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 6   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 65
           MQHGSKNIA+EKKLLREI+SS+KK+IR+TT+EELDVPIKKKN+EIENSHLYLYTTDFEGI
Sbjct: 1   MQHGSKNIANEKKLLREINSSKKKKIRTTTIEELDVPIKKKNDEIENSHLYLYTTDFEGI 60

Query: 66  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           N+EMKRLEMVK+KAVANAAVGGKLWSSLGTKKDIQQ+VN
Sbjct: 61  NEEMKRLEMVKQKAVANAAVGGKLWSSLGTKKDIQQQVN 99

[Close]

BLAST of CsaV3_1G036790 vs. ExPASy TrEMBL
Match: A0A6J1GT27 (uncharacterized protein LOC111457179 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457179 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.8e-24
Identity = 61/103 (59.22%), Postives = 84/103 (81.55%), Query Frame = 0


Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KL+FL++HGSKN+A EKKLLR+I++S+K +   TT++EL+ PIK  +E+I+NS ++LY T
Sbjct: 82  KLQFLLRHGSKNMAKEKKLLRDINTSQKSKQAGTTLDELEAPIKNLDEQIKNSRMHLYRT 141

Query: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKV 104
           DFE I +E K  EM KE AVANA VGG+LWSSLG+KK +Q++V
Sbjct: 142 DFEEIYREKKVHEMEKETAVANAGVGGRLWSSLGSKKHVQRQV 184

[Close]

BLAST of CsaV3_1G036790 vs. ExPASy TrEMBL
Match: A0A6J1GSQ0 (uncharacterized protein LOC111457179 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457179 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.9e-19
Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVP------------------ 60
           KL+FL++HGSKN+A EKKLLR+I++S+K +   TT++EL+ P                  
Sbjct: 82  KLQFLLRHGSKNMAKEKKLLRDINTSQKSKQAGTTLDELEAPVHKLKLLPFKFLCWIISI 141

Query: 61  ------------IKKKNEEIENSHLYLYTTDFEGINKEMKRLEMVKEKAVANAAVGGKLW 104
                       IK  +E+I+NS ++LY TDFE I +E K  EM KE AVANA VGG+LW
Sbjct: 142 NIFLLIFSESKQIKNLDEQIKNSRMHLYRTDFEEIYREKKVHEMEKETAVANAGVGGRLW 201

The following BLAST results are available for this feature:

BLAST of CsaV3_1G036790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653295.1	7.0e-47	100.00	hypothetical protein Csa_023263, partial [Cucumis sativus]	[more]
XP_016899262.1	2.7e-43	90.38	PREDICTED: uncharacterized protein LOC103489454 [Cucumis melo]	[more]
KAA0054011.1	9.7e-41	89.90	proton pump-interactor 1-like [Cucumis melo var. makuwa] >TYK20697.1 proton pump...	[more]
KAG7012544.1	2.2e-24	60.19	hypothetical protein SDJN02_25296, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022955118.1	1.4e-23	59.22	uncharacterized protein LOC111457179 isoform X2 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G036790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G036790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVC7	1.2e-44	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534760 PE=4 SV=1	[more]
A0A1S4DTD6	1.3e-43	90.38	uncharacterized protein LOC103489454 OS=Cucumis melo OX=3656 GN=LOC103489454 PE=...	[more]
A0A5D3DAS6	4.7e-41	89.90	Proton pump-interactor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1GT27	6.8e-24	59.22	uncharacterized protein LOC111457179 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GSQ0	3.9e-19	45.86	uncharacterized protein LOC111457179 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsaV3_1G036790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G036790.1	CsaV3_1G036790.1	mRNA