CsaV3_1G036640 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTAATTATTATTTCGAAAAGGATAACGGCTAAAATATAGTAACATTTTAAAAAACTGTAAATACAAATATAACCAACAAAAATTTACAAATATAACCAAAAGTAATTTGCAAATATAACAAAAAAAAAAATACGGTAAAAGATCAAACAAATTCAGTCTATTTACTTAATAAAGGCTTCATATTTAAGTTGGGCTAATAACTGTATAATCAAAATGGGCCTAAAATTAAAGCCCATTAGTAAACAATCTCGCCGCCGTTAGAAATCCGGTAGCCGGCCAACGAAACGACGAGCGGACGGAACCCTTCCAAATAAGGAACCGAAACGAAAACTGCTGTCGAGAAAACTCGATTTTTCAAATCGTTTTGACCTCCAATCGAAGGTGGAAGAACGCTCTATCCACAGGCATGGCCGGACGAAGTCATCAGCCGAATGCCTTGAAACGGCGCGAAGTTCCGTTGAGCCGAAGCCCGCCTGATGATCGTCGATCCCATCATCGTCTTTCTCACTCATCTTCCGTCGGCGCTTCTTCCAGGGCTCACCAGGCAATCCTTCTCGAAGATCGGATATCTGCCCAGCGCCGAGAGATTCAAACTCTCCTCTCTGATAACCAACACCTTGCTGCCACTCACGTGGCGCTCAAGCAAGAGCTGGCCTCGGCTGAGCAAGAGCTCCGGCACTTATCGGCCACTGCGGCTAAAGTCAAGGCCGAGAGAGACGCTGAGGTCAGGGAGGTTTATGAGAAATCGCTGAAGATGGACGCCGAGGTTCGTGCGATGGACGCTATGATGGCGGAGCTCGTTCAAATACGGGCGGATATACAGAGGCTGAGTGCCGTCAAGAAAGAGTTAAATTCCGAGTTGCAAGCTATTCGCGACGACCTTACTAAAGCCTCTTCGGAGTCACAGCCATTGCCGTCTATTAAAGCTGAAATTGATAGAATGCACCATGAAATTCAAAGAGGAAGGTAAATTTTTATTGCTCCTTTGGACGTTTTTCTTTAGTTTTTCAATATCTTTTTCTTCCCTATAGTTCGAAATAGCCTTTTCAAGTTTTATGTTGAGTTTCTCTGGCTGGGAAGGTTTCTCCCATCTATTGTTCCTGAGTTAGCTTAATTCTTTTATAGCTTTATGTTTTTGCTGCAAAGAGGATATCAAATTATCAGTTCAAATGCTAAGCCTTTTCTTTCAATTTTTTGAACATTAGTACCTACTTGAAAGTTTGACCATTAAAAGACTCTAAAGTTTGTTCTTTTGGTCTAGCTGTTCTTGTTATTGATATCATTACTATCACAGTGGTCGCTTTCGAGGCCCTTTCTTAATTTATGTTTACATGAGTGGCCACTTTTGAAAGACATGGTTCAACAGTTATGGAATTGGAAAGATTGGAAAACGAGATGTGGACACAAGCCTGGGAAAGAAACGCCGGCCACCTTTATTAAAGAACAAGTAGTCTCTTTTATTCAGTGATTGAACACCCGGAGATATAGGCATAGTAGGTCAGTCTCAACGAGATAAGAATTCCATTTTGGAGTATACTTTGTTTGGGTTAGGCGAAGTTGAGAGGTGGAGCGAGATACCTTCATGCCAAGAAAGTATTACAGTGGATAGAAAAGACATTAAATTGGTTGTCAAGCTAAAAACATTGTATATCAAAACTATCTCATCCTAAAAGGAAAAGCAGTATGCTTGTTCAAGGAAACAATCCTAGTATCAGTTCACTTGGTGCAAAACTATGTTATCTTTAATATTAGATCTTATATGATCTTACTGGACGAACAATATGCTTGTTTAGTCATAGAGTTGGCACAATTCTCTTTGCAAAAATATTATATTCAATATGATGAAGTTGTTCAAACCATTGGAATAAAAAGAATAATAGAATCAGAAAAGTTAGGAGGAGGAAATGTAAGCAGATTGTTTTGAGGTCGGCATGTGGAAGTTTCATCATTTTCTATAGTTAACTCCAATGTTTCTTCTTGTTTGTTGATTGCAAAACAAAACAACTTGATATTATATAACAGAGTGGGCAAAAAAATTGGTAGGATCACTCCTTTTATGCAGAAGAAATCCAATGCAGTATCCTATTTATTTGAGAAGTATAATTGAGGCTTGAAAATTACCTCTGCCTATTTGTTGTTGATCTGAACAGGGCTGCTATCGAATATGAGAAAAGAACACACGCTAGTAATCTTGAGCAGGCTGAGGCAATGGAAAAGGGTATGGTTTCCATGTCTCAGGAAGTTGAAAAATTGCGTGCTGAACTGGCCAATGCAGAGAAGAGAGCAAGGGCTGCAGCAGCTGTAACGAGTCCTTGTAAGCCTGTCTTTTTGCCCTTGGTAACTTATCCATCATCCTGTTTTTTCCACTGACTCTTATCACTTTCATACAGTTTCCGGTTATACTGCAGCTTATGGCCATCCAGACATAAGATATGGTGGAAGCTCATATCCCCCAGACCCTTATGGCATGCATCAGGTATATCCTCTATGACTGTATTAGTTCCATGGCCCAACAATTTAGTGCAGCGCTGGTACTTCCTTGATCTCATTGGAACCTGAAGTTGAACTATCAACTATAAGTAACCATAATATAACTTAGGCTATGTTTGGAATGCCAAAGATACTCCTGACTCAAAAGTATCATGTTTGACAATGATATAAAAGTACTAATGCCAAAGGCCAAAAGCACCTTGGAATATTCGTTGACGTAGCTACAGAATGCTTTCAGCCATGTACTTTTAAGAGAATAGGATTGAGCATCTAAAGAATTGGTTATCAACTTATCAAACAATGAAGGGATTGTAACTGAAGCTAAAAGCATTTCCGGACATCTTTATACGATCAAAACCAAAAACCAAGCAACAAAATTGCTTCCTTTAATGGAAATTAGAATTGCAAAAAAAAAACTCTGTAGAGGTGACTGTGAAGGTGTTTTTATAGGAGGGCAACATGCCCTTGGTTGCTTGCAACTTAAAATGGGTGGAATTGTTTGTTAGAACTATTATGACAGCCCTTGAACCGACTATAAAAACATGGGGTTTTAGCTTAAGAGAGTTTCTTGTGTGGTTTATTTTGCTTGAGTTGAATGAACGTAGAGGGGTTTTAAGTTTTTAACCTCTAACCTCAAAGAAAAGGAGTGGTGTCTTAATTACGAAGTTGTACTCATGTTAGTATGTGTTCCCTTATATCTATTAGATATGACAAATCAATGTGTTCTCAACAATTATCATCTCTGAACCTCCATAGTTATAGGATGAGGATCTGTTTCAGGTTCAAGGAGGATCTGGCATCGATATTGTTTCGCAATATGCACGTGCACCACCGACACATGGACCACCTTACAACATACAACCAACACCACCACAGCATATGCAATGAATGGGCAGAATGATGTGTGGACATGTTTTGTGCTCAATGTGGAGGACGGTCTGTGTCTTAGAGTCCATGAGTGGAAAGACACTGTAAATACTGCCGTGGAAGCTCTGTTTTTCCCTCGGAAATTCCTTTCCTCCAGGGTCGCAGAGGAGGTTCGGTAGCCACTTTTATGTACATTTAACTTGCTGTGACCCATTGCAATTCTGAAAGTTGTTCAATATCATAGTTGGGCTAAGTTTTGACGTGCTCTTTTGATTCACCCACAAAATGATATTGCAAATATCTTATCCTCATTAGAACCCAATGTTTGAATCTTATATAGTAAAATATGAAACAAGCAAGGTAATAGTACATGATGGCATTTCTATCCTACTTTCTCCATTTTTTCGTTTAGAAAGGAGGATAGAAGAATTTGGATATTTGATCTCGAGGATATAAGTTTGAGCACAGATTAGCATATTTATCTTTGTTTATTTCTTAGGTTGTATTCTTCCCTTTCTTTTCATCTATTCAGAACTCTTTTAGTAATTTGTGATCATATTTTTTAACATCATTTTAGAATTTTAGTGTTATGGAGAATGTATGGAAAACTCTATTTATCTTTTTGAAAAAACAAGTCATATGCACGGTGGCATATCTA ATGGCCGGACGAAGTCATCAGCCGAATGCCTTGAAACGGCGCGAAGTTCCGTTGAGCCGAAGCCCGCCTGATGATCGTCGATCCCATCATCGTCTTTCTCACTCATCTTCCGTCGGCGCTTCTTCCAGGGCTCACCAGGCAATCCTTCTCGAAGATCGGATATCTGCCCAGCGCCGAGAGATTCAAACTCTCCTCTCTGATAACCAACACCTTGCTGCCACTCACGTGGCGCTCAAGCAAGAGCTGGCCTCGGCTGAGCAAGAGCTCCGGCACTTATCGGCCACTGCGGCTAAAGTCAAGGCCGAGAGAGACGCTGAGGTCAGGGAGGTTTATGAGAAATCGCTGAAGATGGACGCCGAGGTTCGTGCGATGGACGCTATGATGGCGGAGCTCGTTCAAATACGGGCGGATATACAGAGGCTGAGTGCCGTCAAGAAAGAGTTAAATTCCGAGTTGCAAGCTATTCGCGACGACCTTACTAAAGCCTCTTCGGAGTCACAGCCATTGCCGTCTATTAAAGCTGAAATTGATAGAATGCACCATGAAATTCAAAGAGGAAGGGCTGCTATCGAATATGAGAAAAGAACACACGCTAGTAATCTTGAGCAGGCTGAGGCAATGGAAAAGGGTATGGTTTCCATGTCTCAGGAAGTTGAAAAATTGCGTGCTGAACTGGCCAATGCAGAGAAGAGAGCAAGGGCTGCAGCAGCTGTAACGAGTCCTTTTTCCGGTTATACTGCAGCTTATGGCCATCCAGACATAAGATATGGTGGAAGCTCATATCCCCCAGACCCTTATGGCATGCATCAGGTTCAAGGAGGATCTGGCATCGATATTGTTTCGCAATATGCACGTGCACCACCGACACATGGACCACCTTACAACATACAACCAACACCACCACAGCATATGCAATGA ATGGCCGGACGAAGTCATCAGCCGAATGCCTTGAAACGGCGCGAAGTTCCGTTGAGCCGAAGCCCGCCTGATGATCGTCGATCCCATCATCGTCTTTCTCACTCATCTTCCGTCGGCGCTTCTTCCAGGGCTCACCAGGCAATCCTTCTCGAAGATCGGATATCTGCCCAGCGCCGAGAGATTCAAACTCTCCTCTCTGATAACCAACACCTTGCTGCCACTCACGTGGCGCTCAAGCAAGAGCTGGCCTCGGCTGAGCAAGAGCTCCGGCACTTATCGGCCACTGCGGCTAAAGTCAAGGCCGAGAGAGACGCTGAGGTCAGGGAGGTTTATGAGAAATCGCTGAAGATGGACGCCGAGGTTCGTGCGATGGACGCTATGATGGCGGAGCTCGTTCAAATACGGGCGGATATACAGAGGCTGAGTGCCGTCAAGAAAGAGTTAAATTCCGAGTTGCAAGCTATTCGCGACGACCTTACTAAAGCCTCTTCGGAGTCACAGCCATTGCCGTCTATTAAAGCTGAAATTGATAGAATGCACCATGAAATTCAAAGAGGAAGGGCTGCTATCGAATATGAGAAAAGAACACACGCTAGTAATCTTGAGCAGGCTGAGGCAATGGAAAAGGGTATGGTTTCCATGTCTCAGGAAGTTGAAAAATTGCGTGCTGAACTGGCCAATGCAGAGAAGAGAGCAAGGGCTGCAGCAGCTGTAACGAGTCCTTTTTCCGGTTATACTGCAGCTTATGGCCATCCAGACATAAGATATGGTGGAAGCTCATATCCCCCAGACCCTTATGGCATGCATCAGGTTCAAGGAGGATCTGGCATCGATATTGTTTCGCAATATGCACGTGCACCACCGACACATGGACCACCTTACAACATACAACCAACACCACCACAGCATATGCAATGA MAGRSHQPNALKRREVPLSRSPPDDRRSHHRLSHSSSVGASSRAHQAILLEDRISAQRREIQTLLSDNQHLAATHVALKQELASAEQELRHLSATAAKVKAERDAEVREVYEKSLKMDAEVRAMDAMMAELVQIRADIQRLSAVKKELNSELQAIRDDLTKASSESQPLPSIKAEIDRMHHEIQRGRAAIEYEKRTHASNLEQAEAMEKGMVSMSQEVEKLRAELANAEKRARAAAAVTSPFSGYTAAYGHPDIRYGGSSYPPDPYGMHQVQGGSGIDIVSQYARAPPTHGPPYNIQPTPPQHMQ* Homology
BLAST of CsaV3_1G036640 vs. NCBI nr
Match: XP_004153266.1 (protein FLC EXPRESSOR isoform X1 [Cucumis sativus] >KGN65853.1 hypothetical protein Csa_023277 [Cucumis sativus]) HSP 1 Score: 567.4 bits (1461), Expect = 7.5e-158 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. NCBI nr
Match: XP_031736258.1 (protein FLC EXPRESSOR isoform X2 [Cucumis sativus]) HSP 1 Score: 547.7 bits (1410), Expect = 6.2e-152 Identity = 298/305 (97.70%), Postives = 299/305 (98.03%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. NCBI nr
Match: XP_008457316.1 (PREDICTED: protein FLC EXPRESSOR [Cucumis melo] >KAA0060007.1 protein FLC EXPRESSOR [Cucumis melo var. makuwa] >TYJ97265.1 protein FLC EXPRESSOR [Cucumis melo var. makuwa]) HSP 1 Score: 543.9 bits (1400), Expect = 8.9e-151 Identity = 292/305 (95.74%), Postives = 298/305 (97.70%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. NCBI nr
Match: XP_038894091.1 (protein FLC EXPRESSOR [Benincasa hispida] >XP_038896083.1 protein FLC EXPRESSOR-like [Benincasa hispida]) HSP 1 Score: 520.8 bits (1340), Expect = 8.1e-144 Identity = 279/305 (91.48%), Postives = 288/305 (94.43%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. NCBI nr
Match: XP_023520162.1 (protein FLC EXPRESSOR isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 485.3 bits (1248), Expect = 3.8e-133 Identity = 260/301 (86.38%), Postives = 279/301 (92.69%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy Swiss-Prot
Match: Q93V84 (Protein FLX-like 1 OS=Arabidopsis thaliana OX=3702 GN=FLXL1 PE=1 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.2e-41 Identity = 107/256 (41.80%), Postives = 166/256 (64.84%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy Swiss-Prot
Match: F4IMQ0 (Protein FLC EXPRESSOR OS=Arabidopsis thaliana OX=3702 GN=FLX PE=1 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.3e-40 Identity = 108/250 (43.20%), Postives = 158/250 (63.20%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy Swiss-Prot
Match: Q9C717 (Protein FLX-like 3 OS=Arabidopsis thaliana OX=3702 GN=FLXL3 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.0e-29 Identity = 84/217 (38.71%), Postives = 130/217 (59.91%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy Swiss-Prot
Match: Q84TD8 (Protein FLX-like 2 OS=Arabidopsis thaliana OX=3702 GN=FLXL2 PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.7e-25 Identity = 85/271 (31.37%), Postives = 150/271 (55.35%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy Swiss-Prot
Match: Q9FH51 (Protein FLX-like 4 OS=Arabidopsis thaliana OX=3702 GN=FLXL4 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.1e-17 Identity = 66/207 (31.88%), Postives = 115/207 (55.56%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy TrEMBL
Match: A0A0A0LVN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533600 PE=3 SV=1) HSP 1 Score: 567.4 bits (1461), Expect = 3.7e-158 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy TrEMBL
Match: A0A5A7UZC9 (Protein FLC EXPRESSOR OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00590 PE=3 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 4.3e-151 Identity = 292/305 (95.74%), Postives = 298/305 (97.70%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy TrEMBL
Match: A0A1S3C6H8 (protein FLC EXPRESSOR OS=Cucumis melo OX=3656 GN=LOC103497037 PE=3 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 4.3e-151 Identity = 292/305 (95.74%), Postives = 298/305 (97.70%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy TrEMBL
Match: A0A6J1HLX7 (protein FLC EXPRESSOR-like OS=Cucurbita moschata OX=3662 GN=LOC111464813 PE=3 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.1e-133 Identity = 259/301 (86.05%), Postives = 278/301 (92.36%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. ExPASy TrEMBL
Match: A0A6J1I3C2 (protein FLC EXPRESSOR-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469550 PE=3 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 7.7e-132 Identity = 259/301 (86.05%), Postives = 276/301 (91.69%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. TAIR 10
Match: AT3G14750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). ) HSP 1 Score: 171.8 bits (434), Expect = 8.6e-43 Identity = 107/256 (41.80%), Postives = 166/256 (64.84%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. TAIR 10
Match: AT2G30120.2 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 2527 Blast hits to 2101 proteins in 358 species: Archae - 77; Bacteria - 245; Metazoa - 1087; Fungi - 215; Plants - 350; Viruses - 4; Other Eukaryotes - 549 (source: NCBI BLink). ) HSP 1 Score: 168.3 bits (425), Expect = 9.5e-42 Identity = 108/250 (43.20%), Postives = 158/250 (63.20%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. TAIR 10
Match: AT1G55170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). ) HSP 1 Score: 130.2 bits (326), Expect = 2.9e-30 Identity = 84/217 (38.71%), Postives = 130/217 (59.91%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. TAIR 10
Match: AT2G30120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). ) HSP 1 Score: 123.6 bits (309), Expect = 2.7e-28 Identity = 72/160 (45.00%), Postives = 107/160 (66.88%), Query Frame = 0
BLAST of CsaV3_1G036640 vs. TAIR 10
Match: AT1G67170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species: Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryotes - 1370 (source: NCBI BLink). ) HSP 1 Score: 117.5 bits (293), Expect = 1.9e-26 Identity = 85/271 (31.37%), Postives = 150/271 (55.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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