CsaV3_1G034240 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G034240
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	RING-type domain-containing protein
Location	chr1: 21452006 .. 21452564 (-)
RNA-Seq Expression	CsaV3_1G034240
Synteny	CsaV3_1G034240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTTGTCACCGTCGCCTTTGCCGCCGTTGCACTCTCCAATCCTACTTCCTGGCTTCTTTATGGTTTTGATGACGGTCTCCATGCTTCTTCTCATTGTGCTATTTTTATTCATTGCCATCTTATGTACAAAACGATCAGCCAAATCTGACGGGGAAGAGTCGTCGGAGAATCTGGACATTGAAGCACCGATTTTTCATTACAGCGGAGTTGAAGGCGACGAACAAGAATGTGTGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCACAAAGACTGCATTGACCGGTGGTTTAAGGTGAATGGCCATTGTCCAATTTGCCGGACCTCCGTTTGTATGGTAGTTATTGATCGCGGTGGAAATGCCATGGCTTCTTCTTCATCTTTACTGACCCCCTTCATCAACCAAATTTAATCTCGACACTGATCAACTTTGTGATCACAATGAAACAAGCAAAGTAGTAAATACTAAATATATAGAGTCCTTTTATGTTCTCTTTCCTAATGTTTTGTAGCTACATTGA

mRNA sequence

ATGCCGTTGTCACCGTCGCCTTTGCCGCCGTTGCACTCTCCAATCCTACTTCCTGGCTTCTTTATGGTTTTGATGACGGTCTCCATGCTTCTTCTCATTGTGCTATTTTTATTCATTGCCATCTTATGTACAAAACGATCAGCCAAATCTGACGGGGAAGAGTCGTCGGAGAATCTGGACATTGAAGCACCGATTTTTCATTACAGCGGAGTTGAAGGCGACGAACAAGAATGTGTGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCACAAAGACTGCATTGACCGGTGGTTTAAGCTACATTGA

Coding sequence (CDS)

ATGCCGTTGTCACCGTCGCCTTTGCCGCCGTTGCACTCTCCAATCCTACTTCCTGGCTTCTTTATGGTTTTGATGACGGTCTCCATGCTTCTTCTCATTGTGCTATTTTTATTCATTGCCATCTTATGTACAAAACGATCAGCCAAATCTGACGGGGAAGAGTCGTCGGAGAATCTGGACATTGAAGCACCGATTTTTCATTACAGCGGAGTTGAAGGCGACGAACAAGAATGTGTGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCACAAAGACTGCATTGACCGGTGGTTTAAGCTACATTGA

Protein sequence

MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLDIEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH*

Homology

[Close]

BLAST of CsaV3_1G034240 vs. NCBI nr
Match: KAE8653251.1 (hypothetical protein Csa_020059 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60
           MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60

Query: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH
Sbjct: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 113

[Close]

BLAST of CsaV3_1G034240 vs. NCBI nr
Match: XP_011648512.2 (RING-H2 finger protein ATL79 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60
           MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60

Query: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFK++
Sbjct: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVN 113

[Close]

BLAST of CsaV3_1G034240 vs. NCBI nr
Match: KGN66137.2 (hypothetical protein Csa_019830 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.4e-53
Identity = 108/113 (95.58%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60
           MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAK DGEESS+NLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLD 60

Query: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           IEAPIFHYSGVE  EQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH
Sbjct: 61  IEAPIFHYSGVESGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 113

[Close]

BLAST of CsaV3_1G034240 vs. NCBI nr
Match: XP_004153928.3 (RING-H2 finger protein ATL67 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 2.1e-52
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60
           MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAK DGEESS+NLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLD 60

Query: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           IEAPIFHYSGVE  EQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFK++
Sbjct: 61  IEAPIFHYSGVESGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVN 113

[Close]

BLAST of CsaV3_1G034240 vs. NCBI nr
Match: XP_011659858.1 (E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 8.7e-51
Identity = 103/113 (91.15%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60
           MPLSPSPLPPLHSPILLPGFFMVL+T+SMLLLIVLFLFIAILCTKRSAKSD EE SENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLD 60

Query: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           IEAPIFHY+ VEG EQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFK++
Sbjct: 61  IEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVN 113

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.3e-08
Identity = 40/120 (33.33%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 23  VLMTVSMLLLIVLFL-FIAILCTK-----------RSAKSDGEE--------SSENLDIE 82
           V++ +++L L++ F+ F +I C +           RS  +D E         ++  LD E
Sbjct: 51  VVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAE 110

Query: 83  A----PIFHYSGVEG-----DEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           A    P F YS V+         EC +CLCE E+ E  R M  C HVFH DC+D W   H
Sbjct: 111 AIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH 170

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 9.5e-08
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 64  PIFHYS--GVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFK 112
           PIF YS    E   +EC +CL E EE ++ R +  CGHVFH DCID WF+
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR 146

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 30/77 (38.96%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 46  RSAKSDGEESSENLD---IEA-PIFHYSGVE-----GDEQECVICLCEIEEGEKCRKMKT 105
           R+  +DG      LD   +E+ P+F YS V+       + EC ICL E+E+ E  R +  
Sbjct: 83  RNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPI 142

Query: 106 CGHVFHKDCIDRWFKLH 114
           C H+FH DCID W   H
Sbjct: 143 CNHLFHIDCIDTWLYSH 159

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy Swiss-Prot
Match: Q9P7E1 (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP4H10.07 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-07
Identity = 20/55 (36.36%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 55  SSENLDIEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRW 110
           S ++L+    +F +SG    ++ C++CL   E  ++CR++K C H FH++CID+W
Sbjct: 505 SQKDLEKAGGVFPFSGT---DERCLVCLSNFELNDECRRLKQCNHFFHRECIDQW 556

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy Swiss-Prot
Match: Q6NKR1 (RING-H2 finger protein ATL28 OS=Arabidopsis thaliana OX=3702 GN=ATL28 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-07
Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 64  PIFHYSGV--EGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           P+FHYS    +    EC ICL E  + +  R +  C H FH +CID WF+LH
Sbjct: 87  PVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELH 138

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy TrEMBL
Match: A0A0A0K790 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.2e-47
Identity = 97/112 (86.61%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60
           MPLSPSP+P LHS ILLPGF M L+TV MLLLIVLF FI ILC KRSAKSDGEE  ENLD
Sbjct: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70

Query: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKL 113
           IEAPIFHY+GVEGDEQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFK+
Sbjct: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV 122

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy TrEMBL
Match: A0A0A0LUU6 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G512470 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.0e-42
Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 22  MVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLDIEAPIFHYSGVEGDEQECVIC 81
           MVLMTVSMLLLIVLFLFIAILCTKRSAK DGEESS+NLDIEAPIFHYSGVEG EQECVIC
Sbjct: 1   MVLMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLDIEAPIFHYSGVEGGEQECVIC 60

Query: 82  LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           LCEIEEGEKCRKMKTCGHVFHKDCIDRWFK++
Sbjct: 61  LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVN 92

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy TrEMBL
Match: A0A0A0LY10 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.1e-38
Identity = 85/112 (75.89%), Postives = 91/112 (81.25%), Query Frame = 0


Query: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60
           M LSPSPLP LHS ILLP +   L+  SM L IVL LFI+ILC KRSAKSD EE  EN+D
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKL 113
           IEAPIFHY G EG EQ+C ICLCEIEEGEKCRKMKTCGHVFHKDCI RWFK+
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKV 112

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy TrEMBL
Match: A0A5D3BG26 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002250 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.9e-37
Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = 0


Query: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60
           +PL PSPLPPLHSPI+LP     L+ +SM LL+VL L IAILC KRSAKSD +E S+NL+
Sbjct: 11  LPLPPSPLPPLHSPIVLPRSIEDLLMLSMFLLLVLILVIAILCGKRSAKSDEKELSKNLN 70

Query: 61  IEAPIFHYSGVEG-DEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 111
           I+APIFHY G++G DEQEC ICLCEIEEGEKCRKMKTCGH FHKDCIDRWF
Sbjct: 71  IQAPIFHY-GIDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRWF 120

[Close]

BLAST of CsaV3_1G034240 vs. ExPASy TrEMBL
Match: A0A1S3C741 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103497233 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.9e-37
Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = 0


Query: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60
           +PL PSPLPPLHSPI+LP     L+ +SM LL+VL L IAILC KRSAKSD +E S+NL+
Sbjct: 11  LPLPPSPLPPLHSPIVLPRSIEDLLMLSMFLLLVLILVIAILCGKRSAKSDEKELSKNLN 70

Query: 61  IEAPIFHYSGVEG-DEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 111
           I+APIFHY G++G DEQEC ICLCEIEEGEKCRKMKTCGH FHKDCIDRWF
Sbjct: 71  IQAPIFHY-GIDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRWF 120

[Close]

BLAST of CsaV3_1G034240 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 5.2e-09
Identity = 40/120 (33.33%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 23  VLMTVSMLLLIVLFL-FIAILCTK-----------RSAKSDGEE--------SSENLDIE 82
           V++ +++L L++ F+ F +I C +           RS  +D E         ++  LD E
Sbjct: 51  VVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAE 110

Query: 83  A----PIFHYSGVEG-----DEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           A    P F YS V+         EC +CLCE E+ E  R M  C HVFH DC+D W   H
Sbjct: 111 AIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH 170

[Close]

BLAST of CsaV3_1G034240 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 57.8 bits (138), Expect = 6.7e-09
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 64  PIFHYS--GVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFK 112
           PIF YS    E   +EC +CL E EE ++ R +  CGHVFH DCID WF+
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR 146

[Close]

BLAST of CsaV3_1G034240 vs. TAIR 10
Match: AT4G40070.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 8.8e-09
Identity = 30/77 (38.96%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 46  RSAKSDGEESSENLD---IEA-PIFHYSGVE-----GDEQECVICLCEIEEGEKCRKMKT 105
           R+  +DG      LD   +E+ P+F YS V+       + EC ICL E+E+ E  R +  
Sbjct: 83  RNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPI 142

Query: 106 CGHVFHKDCIDRWFKLH 114
           C H+FH DCID W   H
Sbjct: 143 CNHLFHIDCIDTWLYSH 159

[Close]

BLAST of CsaV3_1G034240 vs. TAIR 10
Match: AT2G35420.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.0e-08
Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 64  PIFHYSGV--EGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKLH 114
           P+FHYS    +    EC ICL E  + +  R +  C H FH +CID WF+LH
Sbjct: 87  PVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELH 138

[Close]

BLAST of CsaV3_1G034240 vs. TAIR 10
Match: AT2G27940.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 2.6e-08
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 64  PIFHYS-GVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRW 110
           P++ Y+   +   ++CVICL + EEGE  + +  CGHVFH DC+D W
Sbjct: 125 PVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTW 171

The following BLAST results are available for this feature:

BLAST of CsaV3_1G034240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653251.1	1.4e-56	100.00	hypothetical protein Csa_020059 [Cucumis sativus]	[more]
XP_011648512.2	2.0e-55	98.23	RING-H2 finger protein ATL79 [Cucumis sativus]	[more]
KGN66137.2	1.4e-53	95.58	hypothetical protein Csa_019830 [Cucumis sativus]	[more]
XP_004153928.3	2.1e-52	93.81	RING-H2 finger protein ATL67 [Cucumis sativus]	[more]
XP_011659858.1	8.7e-51	91.15	E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]	[more]

BLAST of CsaV3_1G034240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64763	7.3e-08	33.33	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV...	[more]
Q9LZJ6	9.5e-08	52.00	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8W571	1.2e-07	38.96	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]
Q9P7E1	2.1e-07	36.36	Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strai...	[more]
Q6NKR1	2.8e-07	44.23	RING-H2 finger protein ATL28 OS=Arabidopsis thaliana OX=3702 GN=ATL28 PE=2 SV=1	[more]

BLAST of CsaV3_1G034240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K790	8.2e-47	86.61	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 P...	[more]
A0A0A0LUU6	8.0e-42	94.57	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G512470 PE...	[more]
A0A0A0LY10	3.1e-38	75.89	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE...	[more]
A0A5D3BG26	5.9e-37	74.77	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C741	5.9e-37	74.77	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103497233 PE=3 ...	[more]

BLAST of CsaV3_1G034240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35000.1	5.2e-09	33.33	RING/U-box superfamily protein	[more]
AT3G62690.1	6.7e-09	52.00	AtL5	[more]
AT4G40070.1	8.8e-09	38.96	RING/U-box superfamily protein	[more]
AT2G35420.1	2.0e-08	44.23	RING/U-box superfamily protein	[more]
AT2G27940.1	2.6e-08	44.68	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 77..111 e-value: 6.3E-10 score: 39.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 78..113 score: 8.786275
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 54..113 e-value: 1.9E-14 score: 54.7
None	No IPR available	PANTHER	PTHR14155:SF550	RING-H2 FINGER PROTEIN ATL40	coord: 19..113
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 19..113
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 71..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G034240.1	CsaV3_1G034240.1	mRNA