CsaV3_1G034000 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGACATCAATCAAAAGATTGTCGTAAGCCAAAGAACCTTAAGAAAAAACATGCTCAAGCTCATATCACAGAAGTTGATGAAGTATCAAATGGTGTTGCAGATATTGACCTTTGTGTAGTTATTTTAGAATGCAACAAGGTGGATAACTCCAAGGAATGGTGGGTAGACACTGGGGCTACTCGTCATATTTGTGCCAACAAGTATATGTTGACATCATATGTGCCAGTCTCTGGTGGAGAACAACTATTTATGGGTAACGCATATACTTCAAAG ATGGGACATCAATCAAAAGATTGTCGTAAGCCAAAGAACCTTAAGAAAAAACATGCTCAAGCTCATATCACAGAAGTTGATGAAGTATCAAATGGTGTTGCAGATATTGACCTTTGTGTAGTTATTTTAGAATGCAACAAGGTGGATAACTCCAAGGAATGGTGGGTAGACACTGGGGCTACTCGTCATATTTGTGCCAACAAGTATATGTTGACATCATATGTGCCAGTCTCTGGTGGAGAACAACTATTTATGGGTAACGCATATACTTCAAAG ATGGGACATCAATCAAAAGATTGTCGTAAGCCAAAGAACCTTAAGAAAAAACATGCTCAAGCTCATATCACAGAAGTTGATGAAGTATCAAATGGTGTTGCAGATATTGACCTTTGTGTAGTTATTTTAGAATGCAACAAGGTGGATAACTCCAAGGAATGGTGGGTAGACACTGGGGCTACTCGTCATATTTGTGCCAACAAGTATATGTTGACATCATATGTGCCAGTCTCTGGTGGAGAACAACTATTTATGGGTAACGCATATACTTCAAAG MGHQSKDCRKPKNLKKKHAQAHITEVDEVSNGVADIDLCVVILECNKVDNSKEWWVDTGATRHICANKYMLTSYVPVSGGEQLFMGNAYTSK Homology
BLAST of CsaV3_1G034000 vs. NCBI nr
Match: KAE8653238.1 (hypothetical protein Csa_019792, partial [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_1G034000 vs. NCBI nr
Match: KAA0062659.1 (pol polyprotein [Cucumis melo var. makuwa] >TYK01193.1 pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 164.1 bits (414), Expect = 5.8e-37 Identity = 76/92 (82.61%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CsaV3_1G034000 vs. NCBI nr
Match: KAA0066206.1 (pol polyprotein [Cucumis melo var. makuwa] >TYK13469.1 pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 160.6 bits (405), Expect = 6.4e-36 Identity = 74/92 (80.43%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CsaV3_1G034000 vs. NCBI nr
Match: KAA0042920.1 (pol polyprotein [Cucumis melo var. makuwa] >TYK05320.1 pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 160.2 bits (404), Expect = 8.4e-36 Identity = 75/92 (81.52%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of CsaV3_1G034000 vs. NCBI nr
Match: TYK01391.1 (pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35 Identity = 73/92 (79.35%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CsaV3_1G034000 vs. ExPASy TrEMBL
Match: A0A5D3BN56 (Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00390 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37 Identity = 76/92 (82.61%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CsaV3_1G034000 vs. ExPASy TrEMBL
Match: A0A5D3CTI3 (Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75379G00010 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36 Identity = 74/92 (80.43%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CsaV3_1G034000 vs. ExPASy TrEMBL
Match: A0A5A7THY2 (Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001460 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36 Identity = 75/92 (81.52%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of CsaV3_1G034000 vs. ExPASy TrEMBL
Match: A0A5D3BNM4 (Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00850 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.3e-36 Identity = 73/92 (79.35%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CsaV3_1G034000 vs. ExPASy TrEMBL
Match: A0A5D3BT19 (Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00610 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.4e-35 Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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