CsaV3_1G033300 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G033300
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	DUF4228 domain-containing protein
Location	chr1: 20317401 .. 20318450 (+)
RNA-Seq Expression	CsaV3_1G033300
Synteny	CsaV3_1G033300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAAAATAAATAAGAGCAAAAAAGAGTGATGGGTTAGAGTGTTAAATAGTTAATTTTAGTGTAATTAATAGTGTAAGAGAGTAGTGAAAGAGAGTAGAGAGAGTGATAGGGAGAATGAGAGAGACGGAGAGTTATGTGGATTTGAGGTAATTTCACCGAAATATAAACATAAACAAAAAAGTGTAAAAACGTAATTGAAACTTAGAAAGTAAGTCAAAACCTCCTTTCATTCTTGACATTTTCCAAGACAGATGTAGTGTTCGTTGCAACCAAAATATAAAACAAAAACCAAATAAAAGAAGAATGAAAAAACGAAAAAACGAAGAGAGATCAAGAAGAAAATGAAGAACAACTACTTTCTCTCTCTCCATCTCTCTCCCTTCTCTCTTCCTCTCCCATATTTCAATATTTCATTAATCTCTCTCTCCTCCAATACACAAAACAAACTCAAAATTTAAATTTAAAATTTTTTGCTTTCTTTTTCCTTTTTTTGTATTAAGGCAATGAAAAATAGCATAAGATGCTGCATATCCTGCATTCTTCCTTGCGGAGCTCTTGATGTAATTCGCATAGTCCACTCCAATGGCTACGTCGAAGAAATCACCGGCTCCATCAAAGCTTCCGATGTCATGAAAGCCCATCCTAAACACGTCCTTAAAAAGCCCTCCTCCCCTTCCTCCTCCGCCGCTCACGACGCCGCCTCTGCCCTCCCCAAGATCGTCATCGTCCCACCCGAAGCTGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCCGACCCCGACAAGCCCCGCCGAAGAAAGAAGAGAGAATATTCCAATAATCATCATCGAACAACAACCGCCGCCTCCACCGCCTCCGCCGTACCCGACACCACCACCAACAGCATTTCCATGACTAATCTCCTCGTTTCCGATCACTACCTCTCCGAAATACTCTCCGACAAAGCTTCCACCCACCGCGAACGGCGGCGCGGCCGTGTCGGTGTCTGGAGACCTCACTTACAAAGCATTTGTGAATCACCCAGTGATATCTAA

mRNA sequence

ATGGCAATGAAAAATAGCATAAGATGCTGCATATCCTGCATTCTTCCTTGCGGAGCTCTTGATGTAATTCGCATAGTCCACTCCAATGGCTACGTCGAAGAAATCACCGGCTCCATCAAAGCTTCCGATGTCATGAAAGCCCATCCTAAACACGTCCTTAAAAAGCCCTCCTCCCCTTCCTCCTCCGCCGCTCACGACGCCGCCTCTGCCCTCCCCAAGATCGTCATCGTCCCACCCGAAGCTGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCCGACCCCGACAAGCCCCGCCGAAGAAAGAAGAGAGAATATTCCAATAATCATCATCGAACAACAACCGCCGCCTCCACCGCCTCCGCCGTACCCGACACCACCACCAACAGCATTTCCATGACTAATCTCCTCGTTTCCGATCACTACCTCTCCGAAATACTCTCCGACAAAGCTTCCACCCACCGCGAACGGCGGCGCGGCCGTGTCGGTGTCTGGAGACCTCACTTACAAAGCATTTGTGAATCACCCAGTGATATCTAA

Coding sequence (CDS)

ATGGCAATGAAAAATAGCATAAGATGCTGCATATCCTGCATTCTTCCTTGCGGAGCTCTTGATGTAATTCGCATAGTCCACTCCAATGGCTACGTCGAAGAAATCACCGGCTCCATCAAAGCTTCCGATGTCATGAAAGCCCATCCTAAACACGTCCTTAAAAAGCCCTCCTCCCCTTCCTCCTCCGCCGCTCACGACGCCGCCTCTGCCCTCCCCAAGATCGTCATCGTCCCACCCGAAGCTGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCCGACCCCGACAAGCCCCGCCGAAGAAAGAAGAGAGAATATTCCAATAATCATCATCGAACAACAACCGCCGCCTCCACCGCCTCCGCCGTACCCGACACCACCACCAACAGCATTTCCATGACTAATCTCCTCGTTTCCGATCACTACCTCTCCGAAATACTCTCCGACAAAGCTTCCACCCACCGCGAACGGCGGCGCGGCCGTGTCGGTGTCTGGAGACCTCACTTACAAAGCATTTGTGAATCACCCAGTGATATCTAA

Protein sequence

MAMKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAASTASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI*

Homology

[Close]

BLAST of CsaV3_1G033300 vs. NCBI nr
Match: KGN65978.2 (hypothetical protein Csa_019723 [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 8.4e-96
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MAMKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPS 60
           MAMKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPS
Sbjct: 1   MAMKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPS 60

Query: 61  SSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAA 120
           SSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAA
Sbjct: 61  SSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAA 120

Query: 121 STASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPS 180
           STASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPS
Sbjct: 121 STASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPS 180

Query: 181 DI 183
           DI
Sbjct: 181 DI 182

[Close]

BLAST of CsaV3_1G033300 vs. NCBI nr
Match: XP_004150211.1 (uncharacterized protein LOC101205379 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 7.1e-95
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 62
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 63  AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAST 122
           AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAST
Sbjct: 61  AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAST 120

Query: 123 ASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI 182
           ASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Sbjct: 121 ASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI 180

[Close]

BLAST of CsaV3_1G033300 vs. NCBI nr
Match: XP_008443296.1 (PREDICTED: uncharacterized protein LOC103486913 [Cucumis melo] >KAA0057042.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-89
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SS 62
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SS
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 63  SAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAS 122
           SAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKRE+SNNHHRT T AS
Sbjct: 61  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREHSNNHHRTITTAS 120

Query: 123 TASAVPDTTT--NSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP 182
           TASAVPDTTT  N+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP
Sbjct: 121 TASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP 180

[Close]

BLAST of CsaV3_1G033300 vs. NCBI nr
Match: XP_038894960.1 (uncharacterized protein LOC120083324 [Benincasa hispida])

HSP 1 Score: 295.4 bits (755), Expect = 3.3e-76
Identity = 158/185 (85.41%), Postives = 168/185 (90.81%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 62
           MKNSIRCCISCILPCG LDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSP SS
Sbjct: 1   MKNSIRCCISCILPCGVLDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSP-SS 60

Query: 63  AAHDAASALPKIVIVPPEADLQRGKIYFLMPL---PPDPDKPRRRKKREYSN--NHHRTT 122
           AAHDAA+A PKIVIVPPEADLQRGKIYFLMPL   PP+PDKPRRRKKR+ +N  NHH   
Sbjct: 61  AAHDAATA-PKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNINHHSHR 120

Query: 123 TAASTASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE 182
           T A+ ++AVP+   N+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE
Sbjct: 121 TTAAVSAAVPN-NNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE 180

[Close]

BLAST of CsaV3_1G033300 vs. NCBI nr
Match: KAG6583958.1 (hypothetical protein SDJN03_19890, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.0 bits (728), Expect = 4.5e-73
Identity = 155/197 (78.68%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 62
           M+NSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSPSSS
Sbjct: 1   MRNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 63  AA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR-----RRKKR----EYSNN 122
           AA  D ASALPKIVIVPPEADLQRGKIYFLMPLPP+PDKPR     RRKKR       NN
Sbjct: 61  AACSDDASALPKIVIVPPEADLQRGKIYFLMPLPPNPDKPRSRSSSRRKKRVTNNNNKNN 120

Query: 123 HHRTTTAASTASAVPDT-------TTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRV 182
           HH   T  + ASA  D+         NSISM+NLLVSD YLSEILS+KASTHRERRRGRV
Sbjct: 121 HHSDRTPPAAASATADSDDDDNNNNNNSISMSNLLVSDQYLSEILSEKASTHRERRRGRV 180

[Close]

BLAST of CsaV3_1G033300 vs. ExPASy TrEMBL
Match: A0A0A0M094 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G471460 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.4e-95
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 62
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 63  AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAST 122
           AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAST
Sbjct: 61  AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAST 120

Query: 123 ASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI 182
           ASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Sbjct: 121 ASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI 180

[Close]

BLAST of CsaV3_1G033300 vs. ExPASy TrEMBL
Match: A0A5A7UMG1 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002290 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.4e-90
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SS 62
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SS
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 63  SAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAS 122
           SAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKRE+SNNHHRT T AS
Sbjct: 61  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREHSNNHHRTITTAS 120

Query: 123 TASAVPDTTT--NSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP 182
           TASAVPDTTT  N+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP
Sbjct: 121 TASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP 180

[Close]

BLAST of CsaV3_1G033300 vs. ExPASy TrEMBL
Match: A0A1S3B8G2 (uncharacterized protein LOC103486913 OS=Cucumis melo OX=3656 GN=LOC103486913 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.4e-90
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SS 62
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SS
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 63  SAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAS 122
           SAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKRE+SNNHHRT T AS
Sbjct: 61  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREHSNNHHRTITTAS 120

Query: 123 TASAVPDTTT--NSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP 182
           TASAVPDTTT  N+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP
Sbjct: 121 TASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP 180

[Close]

BLAST of CsaV3_1G033300 vs. ExPASy TrEMBL
Match: A0A6J1KLR7 (rhoGEF domain-containing protein gxcI-like OS=Cucurbita maxima OX=3661 GN=LOC111495719 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.7e-71
Identity = 154/199 (77.39%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 62
           M+NSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSPSSS
Sbjct: 1   MRNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 63  AA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR-----RRKKREYSNN---- 122
           AA  D ASALPKIVIVPPEADLQRGKIYFLMPLPP+PDKPR     RRKKR  +NN    
Sbjct: 61  AACADDASALPKIVIVPPEADLQRGKIYFLMPLPPNPDKPRSRSSSRRKKRVTNNNNKNN 120

Query: 123 -HHRTTTAASTASAVPDTTTN--------SISMTNLLVSDHYLSEILSDKASTHRERRRG 182
            H   T  A+ ASA  DT  N        SISM+NL VSD YLSEILS+KASTHRERRRG
Sbjct: 121 HHSDRTPPAALASATADTDDNDDNNNNNSSISMSNLHVSDQYLSEILSEKASTHRERRRG 180

[Close]

BLAST of CsaV3_1G033300 vs. ExPASy TrEMBL
Match: A0A6P5WYR0 (ELMO domain-containing protein F-like OS=Durio zibethinus OX=66656 GN=LOC111278682 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.8e-56
Identity = 122/189 (64.55%), Postives = 147/189 (77.78%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 62
           MKN+IRCCISCILPCGALDVIRI+HSNG VEEI+GSIKAS++MKAHPKHVLKKPSSPS  
Sbjct: 1   MKNTIRCCISCILPCGALDVIRIIHSNGRVEEISGSIKASEIMKAHPKHVLKKPSSPSDD 60

Query: 63  AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR----------RRKKREYSNN 122
                   +PKIVIVPP+A+LQRGKIYFLMP+P  P+K R          RR   + SNN
Sbjct: 61  ------GMVPKIVIVPPDAELQRGKIYFLMPVPSTPEKNRSKSSSTTKKKRRDSLDSSNN 120

Query: 123 HHRTTTAASTASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHL 182
           ++  + + S ++A  +   N+ISMTNLL+SD YLSEILS+K ST R+RRRGRVGVWRPHL
Sbjct: 121 NNSNSHSQSMSNA--NKNNNTISMTNLLISDQYLSEILSEKLSTQRDRRRGRVGVWRPHL 180

[Close]

BLAST of CsaV3_1G033300 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 184.9 bits (468), Expect = 5.9e-47
Identity = 104/188 (55.32%), Postives = 123/188 (65.43%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 62
           MK +IRCCI+CILPCGALDVIRIVHSNG+VEEI+G+I AS++MKAHPKHVLKKPSSP+S 
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 63  AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDP-----DKPRRR--------KKREY 122
                  +  KIVIVPPEA+LQRGKIYFLMP           K RR         KKR  
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

Query: 123 SNNHHRTTTAASTASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWR 178
               HR            D    +     L+ SD YL+EILS+K +T ++RR+GRVGVWR
Sbjct: 121 YRRQHRDGDEKCNGGESNDVKDKNYEKDLLISSDRYLTEILSEKVATQKDRRKGRVGVWR 180

[Close]

BLAST of CsaV3_1G033300 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 75/181 (41.44%), Postives = 105/181 (58.01%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 62
           M NS+RCC++C+LPCGALD+IRIVH NGYVEEIT SI A ++++A+P HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCS---- 60

Query: 63  AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTAAST 122
                   + KI+I+ PE++L+RG IYFL+P    P+K RRRK       + +  +A + 
Sbjct: 61  -----QGVVRKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAA 120

Query: 123 ASAVPDTTTNSISMTNLLVSDHYLSEILSDKAS--THRERRR----GRVGVWRPHLQSIC 178
              +            + + + YL E++S  ++   HR RRR      V  WRP L SI 
Sbjct: 121 GREIKG------DEECVKLCEKYLEEVVSSASTGKEHRHRRRHSRSASVSTWRPLLDSIS 166

[Close]

BLAST of CsaV3_1G033300 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-27
Identity = 70/183 (38.25%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 3   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 62
           M NS+RCC++C+LPCGALD+IRIVH NG+V+EIT  + A ++++A+P HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCS---- 60

Query: 63  AAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNNHHRTTTA--- 122
                   + KI+I+ PE++L+RG IYFL+P    P+K + +K++E         +    
Sbjct: 61  -----QGVVRKILILSPESELKRGSIYFLIPDTSMPEKKKTKKRKELRCRKKPLESGNDI 120

Query: 123 -ASTASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRR----GRVGVWRPHLQS 178
            +   S   D   + +++    + D  LSE +S     +R RR+      V  WRPHL S
Sbjct: 121 NSDHVSTNKDLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDS 174

The following BLAST results are available for this feature:

BLAST of CsaV3_1G033300 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65978.2	8.4e-96	100.00	hypothetical protein Csa_019723 [Cucumis sativus]	[more]
XP_004150211.1	7.1e-95	100.00	uncharacterized protein LOC101205379 [Cucumis sativus]	[more]
XP_008443296.1	1.5e-89	95.63	PREDICTED: uncharacterized protein LOC103486913 [Cucumis melo] >KAA0057042.1 DUF...	[more]
XP_038894960.1	3.3e-76	85.41	uncharacterized protein LOC120083324 [Benincasa hispida]	[more]
KAG6583958.1	4.5e-73	78.68	hypothetical protein SDJN03_19890, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_1G033300 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G033300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M094	3.4e-95	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G471460 PE=4 SV=1	[more]
A0A5A7UMG1	7.4e-90	95.63	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3B8G2	7.4e-90	95.63	uncharacterized protein LOC103486913 OS=Cucumis melo OX=3656 GN=LOC103486913 PE=...	[more]
A0A6J1KLR7	7.7e-71	77.39	rhoGEF domain-containing protein gxcI-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6P5WYR0	1.8e-56	64.55	ELMO domain-containing protein F-like OS=Durio zibethinus OX=66656 GN=LOC1112786...	[more]

BLAST of CsaV3_1G033300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29195.1	5.9e-47	55.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06980.1	1.2e-28	41.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30230.1	1.0e-27	38.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 8..177 e-value: 2.1E-32 score: 113.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..129
None	No IPR available	PANTHER	PTHR33052:SF3	OS01G0758500 PROTEIN	coord: 3..180
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 3..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G033300.1	CsaV3_1G033300.1	mRNA