CsaV3_1G031930 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G031930
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 18962915 .. 18963738 (+)
RNA-Seq ExpressionCsaV3_1G031930
SyntenyCsaV3_1G031930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGGAGTTAAGTGGAGTTGGGATGGGGACTATGGGGCTGGAAAGGTAGAATTTCATATTGGGTTCCGATGGCACCACCATAATGGCAGTAAAGTGCTTAACACGAGGGCAAAAATTTGTCTTAGGAAGATTGTTGGTGGTATGATTTGTTTTGTGCACAGGTTTTTTTCAAAAGAGCAGAAGAGGAAAGGTGAAGAGAGAAGTAATTTGGACTGGATGAAGGAAGAAAATGCGTATGAGTGTATCTGATTGTGAAAGAGAGAATAAGTTGTATGAGTGTATCTGATTGTGAAAGAGAGAATAAGTTTGTCACCGAAGAGGCTGAAAGAGAAAGATGAGAAGACTTGTTCCGAGTGTAAATCAAAAGACGATGCATGGGATAAGTCAACAGTAGAGAGAGGTTATTGTTTGGGCAGAAAAATAGATGATAGTGAAAGCTGGTTGGAATCTTTAATTAGAAAGATGAATTTCAAACCTTCTTTTTCATTCCCTTGAGGGATGATGACTTTTTTAAGGCTCTATTAATGGCAAGCTTAACAACTTCTACACAATGTCCTTTCCGGTAGGTAAACTTTTTCAACTCATAGGTCGTATTCATCAAGACAACATTTTTGGAAGAACTTTTGGTGAACGGGGTTGTCAATCAATGCGACATAAACAAGGGCTATCCAACAACAAAACTCCTTCTGAGATGGACTGAAAGATCTCTCTTTCCAATCTTCATGATGCACAAGCCATGGTCAAGTTCAATGGAGAAGATCTTTTTTGTCGATAGTGAAGGACGGAAGTCGAGAGGAAAAAAGGGCGAGACATGTCATTGA

mRNA sequence

ATGAGGGGAGTTAAGTGGAGTTGGGATGGGGACTATGGGGCTGGAAAGGTAGAATTTCATATTGGGTTCCGATGGCACCACCATAATGGCAGTAAAGTGCTTAACACGAGGGCAAAAATTTGTCTTAGGAAGATTGTTGGTGAGAGAATAAGTTTGTCACCGAAGAGGCTGAAAGAGAAAGATGAGAAGACTTGTTCCGAGTGTAAATCAAAAGACGATGCATGGGATAAGTCAACAGTCGTATTCATCAAGACAACATTTTTGGAAGAACTTTTGGTGAACGGGGTTGTCAATCAATGCGACATAAACAAGGGCTATCCAACAACAAAACTCCTTCTGAGATGGACTGAAAGATCTCTCTTTCCAATCTTCATGATGCACAAGCCATGGTCAAGTTCAATGGAGAAGATCTTTTTTGTCGATAGTGAAGGACGGAAGTCGAGAGGAAAAAAGGGCGAGACATGTCATTGA

Coding sequence (CDS)

ATGAGGGGAGTTAAGTGGAGTTGGGATGGGGACTATGGGGCTGGAAAGGTAGAATTTCATATTGGGTTCCGATGGCACCACCATAATGGCAGTAAAGTGCTTAACACGAGGGCAAAAATTTGTCTTAGGAAGATTGTTGGTGAGAGAATAAGTTTGTCACCGAAGAGGCTGAAAGAGAAAGATGAGAAGACTTGTTCCGAGTGTAAATCAAAAGACGATGCATGGGATAAGTCAACAGTCGTATTCATCAAGACAACATTTTTGGAAGAACTTTTGGTGAACGGGGTTGTCAATCAATGCGACATAAACAAGGGCTATCCAACAACAAAACTCCTTCTGAGATGGACTGAAAGATCTCTCTTTCCAATCTTCATGATGCACAAGCCATGGTCAAGTTCAATGGAGAAGATCTTTTTTGTCGATAGTGAAGGACGGAAGTCGAGAGGAAAAAAGGGCGAGACATGTCATTGA

Protein sequence

MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEKDEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSLFPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH*
Homology
[Close]
BLAST of CsaV3_1G031930 vs. NCBI nr
Match: KGN65489.1 (hypothetical protein Csa_019800 [Cucumis sativus])

HSP 1 Score: 332.4 bits (851), Expect = 2.1e-87
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK 60
           MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK
Sbjct: 1   MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK 60

Query: 61  DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL 120
           DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL
Sbjct: 61  DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL 120

Query: 121 FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH 157
           FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH
Sbjct: 121 FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH 156

[Close]
BLAST of CsaV3_1G031930 vs. ExPASy TrEMBL
Match: A0A0A0LWY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425930 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.0e-87
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK 60
           MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK
Sbjct: 1   MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK 60

Query: 61  DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL 120
           DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL
Sbjct: 61  DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL 120

Query: 121 FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH 157
           FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH
Sbjct: 121 FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH 156

The following BLAST results are available for this feature:
BLAST of CsaV3_1G031930 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65489.12.1e-87100.00hypothetical protein Csa_019800 [Cucumis sativus][more]
BLAST of CsaV3_1G031930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G031930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWY41.0e-87100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425930 PE=4 SV=1[more]
BLAST of CsaV3_1G031930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G031930.1CsaV3_1G031930.1mRNA