CsaV3_1G031900 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G031900
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	macrophage migration inhibitory factor homolog
Location	chr1: 18954442 .. 18957008 (+)
RNA-Seq Expression	CsaV3_1G031900
Synteny	CsaV3_1G031900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATACCTTATCGAGAAAAATGGATAGCAATTTATGAGAGGTGATGGATTAGCAAATTACAATCTTGTTATTCATAAAAAATGGTTTCTTTAAAATTGCAAGCACATTCTCGAAAAAGATGAACATTGATTTTTTAAAATGGTATCGAAAAATACTAATAATAATATTCATAAATTAGTTTGGAATTAAAAAGAAGCTAATTATTAATAGAGGATTAAAAAAGAAACTTAATTATTAGCGTAAATAAAATTTATAAATTGCATGATTTATGAAACATCCGATTGAGATTAGGTTCCTACCCATTTTATCTGCAGAGTCTCTCTGAAAGCCACCCGTCGCCATTGCCATTTTATATGCACAGAACACAAGCTTTAGCTGGTCATCCCCCATTAGCAGCTGCAGAGGAAGAATGCCGACTTTGAATTTATTCACGAATGTTCCAGTTGATACTGTTGTCGCCGCTGACATCCTCAAGGACGCTTCGAAAGCCGTTTCTAAAATTCTCGGCAAACCTGAATCTGTTAAGTTCTCTGCCCCTTCTCCATCCTCCCTCAGTCTCTTACTTCTACTGGGTCTATACGTTTACCCGGTGCTCCACATGCCCACATGATGTTCGACGAAATTACTGTGAGAAAGTAGAAGTCATTTTAAGCTATTGAGTTGTGATTTACCATTGTTCGATTGATACTGCCCTGAATTTCATTTTTCTTGGTGATAGATTAAGTTTGTTTATTTTTGTTTTTTTATGGTAGCATTGGAAGCTTGTTTATGATAATTCAAGGGCATGAACTTACATTTTTCTTCTTCAATGGTTCAGTATGTGATGATCTTGCTGAATGGTGGCACTCCAATTGTATTTGCTACGACAGAAGAGCCAGCCGCGTATGGAGAATTGATCTCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCAAATTGATGGTTCACGTTTCTATATCAAATTTTATGACGTTCAGGCAAGTGTTTCTCGTCCTTTCAATGTGTTTTGACTAGCTGAGATTAGTGCTAGTTGATTTGTGATATGAAAATTGGATAGAAGAGATGTGTGTTTGAATCTTCACATTACGATTTCCTCTCAAATCATGCATATAGTTCACTCTTTGAGCTCCATTAATTAAATTAAATTAGTCTAACTTATCTTTAGAGTTTTGTGATAGTCTAACCTAGTATCTTTGGAGATACTATGTTCAAACATCTTTTAAGTTTTGGGGTTCCACAATAATTTAATTAAATTTGTTATGGTCGTCGCAAATTTTGAACTTCATCGTCTCATTGAACATGTTCTCCCTAAAAAATCCCCTTGCTTAAGGTGTTCATAATATCTATCCTAATACGGTCAAATTGATGGTTGGCTATTCAAATTTTATATATTTTTTGAAGCCGTCTGTTTGTACAATTATTTCTTAACTCCGGTTTATGTGTATTTGGTTCACAAAATTTTTAAAATTACACAAAACTCAAATTGCATAGAATGAATTTATAATTTAACTAGCTGGACTTTTGTGAAGAACTAATCTTCTAAATCATAAACTTGCATTAAATTTTTAACATTCATCTGACCTCTTGAGACTTAGAGGTAGGTTTCTACGTTAGTTGAGCGGGAAATTCAACTATTTATGTAATCACAATATTAACAGTTCCTTGTCAAATCCAAGAGGTTTTAGTTAGTTTGGCATGACATTAGAGTAAAAAGTGTTTGAATTCCTATCAGTTATTTTATGCTTAATTTGATATTGATCCGCACTCGTTGAGTTTTGTACTCAAAACTCAACTCACACAATAAAAAGTTAGTATTAATTGTATTTATAAACAAACTCACAAAATAATAAGTTAGTATTAATTGTATTTATAAACAGACATCTTAACATATTTACTTGAACTTTTGAATTTAGTAGTGATTTAACAGTGTTAACTATCTTAGTCCAACTATTTCAAGTTGTTGCATCACATCCCCATGTCATAATCATCCTAACATTTTACATATGTTGATGTTTTTATAACAGAATTGTTTTCGATGAGAGTAAGATGTCGATTAAATTAACGCATCCATTTTGATCATTTCCAGCGCTCAAACTTCGGGTACAACGGCTCAACATTTTGATAAGTATTTTGC

mRNA sequence

ATGCCGACTTTGAATTTATTCACGAATGTTCCAGTTGATACTGTTGTCGCCGCTGACATCCTCAAGGACGCTTCGAAAGCCGTTTCTAAAATTCTCGGCAAACCTGAATCTTATGTGATGATCTTGCTGAATGGTGGCACTCCAATTGTATTTGCTACGACAGAAGAGCCAGCCGCGTATGGAGAATTGATCTCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCAAATTGATGGTTCACGTTTCTATATCAAATTTTATGACGTTCAGCGCTCAAACTTCGGGTACAACGGCTCAACATTTTGA

Coding sequence (CDS)

ATGCCGACTTTGAATTTATTCACGAATGTTCCAGTTGATACTGTTGTCGCCGCTGACATCCTCAAGGACGCTTCGAAAGCCGTTTCTAAAATTCTCGGCAAACCTGAATCTTATGTGATGATCTTGCTGAATGGTGGCACTCCAATTGTATTTGCTACGACAGAAGAGCCAGCCGCGTATGGAGAATTGATCTCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCAAATTGATGGTTCACGTTTCTATATCAAATTTTATGACGTTCAGCGCTCAAACTTCGGGTACAACGGCTCAACATTTTGA

Protein sequence

MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAYGELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF*

Homology

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BLAST of CsaV3_1G031900 vs. NCBI nr
Match: XP_004146336.1 (macrophage migration inhibitory factor homolog [Cucumis sativus] >KGN65487.1 hypothetical protein Csa_019914 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 5.4e-56
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115

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BLAST of CsaV3_1G031900 vs. NCBI nr
Match: XP_008453554.1 (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPI+FATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIIFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGPGVNGKLSSTIAEILQTK+QIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKIQIDGSRFYIKFYDVQRSNFGYNGSTF 115

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BLAST of CsaV3_1G031900 vs. NCBI nr
Match: XP_038879720.1 (macrophage migration inhibitory factor homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 214.5 bits (545), Expect = 4.7e-52
Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKA+SKILGKPESYVMILLNG TPIVFA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAISKILGKPESYVMILLNGSTPIVFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGPGVNGKLSSTIAEILQTKLQID SRFYIKFYDVQ S FGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDSSRFYIKFYDVQASYFGYNGSTF 115

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BLAST of CsaV3_1G031900 vs. NCBI nr
Match: XP_022134572.1 (macrophage migration inhibitory factor homolog [Momordica charantia])

HSP 1 Score: 208.4 bits (529), Expect = 3.4e-50
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVD VVAADILKDA+KAVSKI+GKPE+YVMILLNGGTPI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDAVVAADILKDATKAVSKIIGKPEAYVMILLNGGTPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGP VNGKLSSTIAEILQTKL IDGSRFYIKFYD +RS FGYNGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLHIDGSRFYIKFYDAERSYFGYNGSTF 115

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BLAST of CsaV3_1G031900 vs. NCBI nr
Match: XP_007154708.1 (hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >XP_007154709.1 hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >XP_027918400.1 macrophage migration inhibitory factor homolog [Vigna unguiculata] >ESW26702.1 hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >ESW26703.1 hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris])

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVA+DIL+DA+KAV+KI+GKPESYVMILLNGG PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPESYVMILLNGGVPIEFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGP VNGKLSSTIAEILQTKL ID SRFYIKFYDVQRS FG+NGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFYIKFYDVQRSFFGFNGSTF 115

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BLAST of CsaV3_1G031900 vs. ExPASy Swiss-Prot
Match: P81748 (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 PE=1 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-21
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP     TNVP +  ++ D LK  SK ++ +LGKPESYV + +NGG  I F  T+ PA +
Sbjct: 1   MPIFTFSTNVPSEN-ISVDFLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           G+L+S+GG+G   N   S+ + + L   L I G+R YI F D++ S+ GYNGSTF
Sbjct: 61  GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVDMRGSDVGYNGSTF 114

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BLAST of CsaV3_1G031900 vs. ExPASy Swiss-Prot
Match: P91850 (Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-19
Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   + TN+P +++ +A  LK AS  V+K LGKPESYV I +NGG  +VF  +E+P A 
Sbjct: 1   MPYFTIDTNIPQNSISSA-FLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
             L SIG +GP VN   +  + ++L  +L+I  +R YI+F D++ S+  +NGSTF
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEASSMAFNGSTF 114

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BLAST of CsaV3_1G031900 vs. ExPASy Swiss-Prot
Match: O44786 (Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti OX=6293 GN=MIF PE=3 SV=3)

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-18
Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   + TN P D++ +A  LK A   V K LGKPESYV I +NGG P+VF  +E+P   
Sbjct: 1   MPYFTIDTNKPQDSISSA-FLKKAPNVVPKALGKPESYVSIHVNGGQPMVFGGSEDPCPV 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
             L SIG +GP VN   +  + ++L  +L+I  +R YI+  D++ S+  +NGSTF
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIESVDIEASSMAFNGSTF 114

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BLAST of CsaV3_1G031900 vs. ExPASy Swiss-Prot
Match: P81529 (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 3.1e-14
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   L TN+   T V +D L   S  V  IL KP SYV + +N    + F  + +PAA+
Sbjct: 1   MPIFTLNTNIKA-TDVPSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAF 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           G L+SIGG+ P  N   S+ + + L  KL I  +R YI F ++   + G+NG+TF
Sbjct: 61  GTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYIHFVNLNGDDVGWNGTTF 114

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BLAST of CsaV3_1G031900 vs. ExPASy Swiss-Prot
Match: Q76BK2 (Macrophage migration inhibitory factor OS=Xenopus laevis OX=8355 GN=mif PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   + TNV  D+ V   +L D +K ++K  GKP  Y+ I +     + F  + +P A 
Sbjct: 1   MPVFTIRTNVCRDS-VPDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAV 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
             L SIG +G   N   +  + +IL  +L I  +R YI +YD+  +N G+NGSTF
Sbjct: 61  CSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNAANVGWNGSTF 114

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BLAST of CsaV3_1G031900 vs. ExPASy TrEMBL
Match: A0A0A0LXE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425910 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.6e-56
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115

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BLAST of CsaV3_1G031900 vs. ExPASy TrEMBL
Match: A0A1S3BXB7 (macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103494235 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.8e-56
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPI+FATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIIFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGPGVNGKLSSTIAEILQTK+QIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKIQIDGSRFYIKFYDVQRSNFGYNGSTF 115

[Close]

BLAST of CsaV3_1G031900 vs. ExPASy TrEMBL
Match: A0A6J1BZZ0 (macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN=LOC111006808 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.6e-50
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVD VVAADILKDA+KAVSKI+GKPE+YVMILLNGGTPI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDAVVAADILKDATKAVSKIIGKPEAYVMILLNGGTPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGP VNGKLSSTIAEILQTKL IDGSRFYIKFYD +RS FGYNGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLHIDGSRFYIKFYDAERSYFGYNGSTF 115

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BLAST of CsaV3_1G031900 vs. ExPASy TrEMBL
Match: V7CBI6 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G141000g PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.3e-49
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVA+DIL+DA+KAV+KI+GKPESYVMILLNGG PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPESYVMILLNGGVPIEFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGP VNGKLSSTIAEILQTKL ID SRFYIKFYDVQRS FG+NGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFYIKFYDVQRSFFGFNGSTF 115

[Close]

BLAST of CsaV3_1G031900 vs. ExPASy TrEMBL
Match: A0A6P6SI69 (macrophage migration inhibitory factor homolog OS=Coffea arabica OX=13443 GN=LOC113691722 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.3e-49
Identity = 101/115 (87.83%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVD+VVA+DILKDA+KAV+KI+GKPESYVMIL+NGG PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDSVVASDILKDATKAVAKIIGKPESYVMILVNGGVPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGP VNGKLSSTIAEILQTKL ID SRFYIKFYDVQRS FG+NGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLSIDSSRFYIKFYDVQRSYFGFNGSTF 115

[Close]

BLAST of CsaV3_1G031900 vs. TAIR 10
Match: AT5G57170.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 190.3 bits (482), Expect = 8.9e-49
Identity = 94/115 (81.74%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTN+PVD V  +DILKDA+KAV+KI+GKPESYVMILLN G PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           GELISIGGLGPGVNGKLS TI+EILQ KL ID SRFYIKFYD  R  FGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYDSPRPFFGYNGSTF 115

[Close]

BLAST of CsaV3_1G031900 vs. TAIR 10
Match: AT5G57170.2 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-43
Identity = 85/102 (83.33%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTN+PVD V  +DILKDA+KAV+KI+GKPESYVMILLN G PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYD 103
           GELISIGGLGPGVNGKLS TI+EILQ KL ID SRFYIKFYD
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYD 102

[Close]

BLAST of CsaV3_1G031900 vs. TAIR 10
Match: AT5G01650.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 1.5e-32
Identity = 66/114 (57.89%), Postives = 86/114 (75.44%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP LNL TNV +D V  + IL +AS  V+KI+GKPE+YVMI+L G  P+ F  TE+PAAY
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGST 115
           GEL+SIGGL   VN KLS+ ++ IL+TKL +  SRF++KFYD + S FG+NG+T
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDTKGSFFGWNGAT 114

[Close]

BLAST of CsaV3_1G031900 vs. TAIR 10
Match: AT5G01650.2 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 6.0e-29
Identity = 60/104 (57.69%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP LNL TNV +D V  + IL +AS  V+KI+GKPE+YVMI+L G  P+ F  TE+PAAY
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQ 105
           GEL+SIGGL   VN KLS+ ++ IL+TKL +  SRF++KFYD +
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDTK 104

[Close]

BLAST of CsaV3_1G031900 vs. TAIR 10
Match: AT3G51660.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 9.9e-16
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP L + TNV  D V       + +KAV+ I+G+P++ VM++L G   IVF   +E AAY
Sbjct: 1   MPCLYITTNVNFDGVNTDPFYSEVTKAVASIVGRPQNLVMVVLKGSVEIVFGGNKEAAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDV 104
            E++S+GG+   V  +L +T+  IL T   I  +RF  K +D+
Sbjct: 61  AEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKVFDI 103

The following BLAST results are available for this feature:

BLAST of CsaV3_1G031900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146336.1	5.4e-56	100.00	macrophage migration inhibitory factor homolog [Cucumis sativus] >KGN65487.1 hyp...	[more]
XP_008453554.1	1.2e-55	98.26	PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo]	[more]
XP_038879720.1	4.7e-52	94.78	macrophage migration inhibitory factor homolog isoform X1 [Benincasa hispida]	[more]
XP_022134572.1	3.4e-50	90.43	macrophage migration inhibitory factor homolog [Momordica charantia]	[more]
XP_007154708.1	1.1e-48	88.70	hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >XP_007154709.1 hypo...	[more]

BLAST of CsaV3_1G031900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81748	2.6e-21	45.22	Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 P...	[more]
P91850	1.9e-19	44.35	Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_2...	[more]
O44786	4.6e-18	43.48	Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti OX=6293 G...	[more]
P81529	3.1e-14	39.13	Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 P...	[more]
Q76BK2	1.7e-12	35.65	Macrophage migration inhibitory factor OS=Xenopus laevis OX=8355 GN=mif PE=1 SV=...	[more]

BLAST of CsaV3_1G031900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXE0	2.6e-56	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425910 PE=3 SV=1	[more]
A0A1S3BXB7	5.8e-56	98.26	macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1BZZ0	1.6e-50	90.43	macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN...	[more]
V7CBI6	5.3e-49	88.70	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G141000g PE=3 ...	[more]
A0A6P6SI69	5.3e-49	87.83	macrophage migration inhibitory factor homolog OS=Coffea arabica OX=13443 GN=LOC...	[more]

BLAST of CsaV3_1G031900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57170.1	8.9e-49	81.74	Tautomerase/MIF superfamily protein	[more]
AT5G57170.2	1.1e-43	83.33	Tautomerase/MIF superfamily protein	[more]
AT5G01650.1	1.5e-32	57.89	Tautomerase/MIF superfamily protein	[more]
AT5G01650.2	6.0e-29	57.69	Tautomerase/MIF superfamily protein	[more]
AT3G51660.1	9.9e-16	38.83	Tautomerase/MIF superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001398	Macrophage migration inhibitory factor	PFAM	PF01187	MIF	coord: 2..115 e-value: 6.9E-25 score: 87.6
IPR001398	Macrophage migration inhibitory factor	PANTHER	PTHR11954	D-DOPACHROME DECARBOXYLASE	coord: 1..115
IPR014347	Tautomerase/MIF superfamily	GENE3D	3.30.429.10	Macrophage Migration Inhibitory Factor	coord: 2..115 e-value: 7.8E-42 score: 144.3
IPR014347	Tautomerase/MIF superfamily	SUPERFAMILY	55331	Tautomerase/MIF	coord: 1..115
None	No IPR available	PANTHER	PTHR11954:SF42	TAUTOMERASE/MIF SUPERFAMILY PROTEIN	coord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G031900.1	CsaV3_1G031900.1	mRNA