CsaV3_1G031680 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G031680
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 18744347 .. 18745974 (-)
RNA-Seq ExpressionCsaV3_1G031680
SyntenyCsaV3_1G031680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAATGGGGTAGATGAGTATCTCGTCATTGTTGAGGATCTGACTAAAGTATTTGACATCTTTACTCCTGAAAATGCTCCTTAGAGAGAACACTAATTTCTTTGTCAATTTCATCTGTTTAAGATGGGTTTTAGACTAATGTTACCAGTAGTTAGTAGTTACTTAACGTTAGAGGTATGAACTTTTCACACATTTCTAAATATCACCAAACAGTTAGAACTTCATTGCCACCATTTTTTTTGTACAATGGTTGAAGGTCATACTCTGCCTAGTATTATCAAAGAGAACTTGAAGGACCCAAAATTTTGTTGAACGTATTTTTGGCATTTAGTTTTTGAAGTTATAATTGTAAAATTCTTAATCCAGTTGAGGAAACGTTGTGATGTACTTCTTCGGATGTGTTATAGGGCCGGGGCTTTTTGTATCAAAATATTGAGCTTATGTGTATGGTAGCTGGGCATGCGAATTTCTTGTGTGAGATAGTTTGTTTATGTTATTTGAGCCAACAGTTGATGAAAGTTCACAAGTGATGAATTTAGGAATATATTCAGACTTGCTGATATATGAAAATATGATTTAGTTTTTCATTAAAACAAAGAAAAGATTTAGGAGCTGTTGCCTGAAACTTACAAAGATGGTAAAATAATGAAACTGAGTATAGCTCTCCCGTGCTTCAGTGTAGCAACCAAGACTGACATTCTTCCTGAGATATCATTGAGCGGTGGGAGATAAATGCAGACCAGGCTATTGCAATGTGCTCGCATATTCTGGTAATAAAATCTTGTTACTGAATGTGTTTCCTGCTTAACCTGAAGTTTTGATATAGCTTGATTCGGATTTCAAATCCTCCCCTATCTTAGGGGACGCCTTGTGATTGTGAGTTCTTAGGGGTCCGCCTTGTGATTGTGAGTTCCAAAGACTTCCATCTGGTTTCTGAAATTAAAACTCACCCATATAGTTTGTGAGTGATTCAAGAGTTTGTGTGTAGATCCTTTAAGCACCCATTTAAACATAATCCTTTTTAGTTGCCAATTGCAAACACTCCTGCAATAACCTTTAGGTGCTTTGAAGTTTTCCGTTGATTTCATTTATCAATGAAATGTTTCTTTATCCCGAAAAAAAGTAACTAACAGCATAAACATCTGTGTGGGTGTCTGTTTATCGTCGCATTCTTCTAGATTGAAGTTTATTCTAGTATTTTATCAGTGCTGGGTTCCTTATAATAAAAAGTTATTTTTATGTACTCTTTATTTCATGTCAAGCTAGTTCCTTTCTTTTATTTAGTAATATTATCATTTACTCATGTCCGTTCAATGACACTAATTGAACCTGTTTTTGGTTTCTGCAGGATTTTGGTTTGCTTGACTTTGCTGGAGAGGCCAGATGGAAGTCTTTGGGCACAGTATTGTTTGTATGTAATATATATTCATGAAACCTTAGAATTCGAGTCGAGTTGAGTTAATTGATACTCGAAGAACGAGGGATATTTTTGGCTATTGTAGAAATTGGAGAATTTTCTATGTTGCTTATTTGTTTTCAGTAAAAAATGGATAGTGCTTAGATCAATTGAATTGGATTTGGTTCCTCCAAACTTGAGATTAGAGCTTTTCACAAAGGCCGGCTAA

mRNA sequence

ATGTTCAATGGGGTAGATGAGTATCTCGTCATTGTTGAGGATCTGACTAAAGGCCGGGGCTTTTTGTATCAAAATATTGAGCTTATGTGTATGGTAGCTGGGCATGCGAATTTCTTGTGTGAGATACGGTGGGAGATAAATGCAGACCAGGCTATTGCAATGTGCTCGCATATTCTGGATTTTGGTTTGCTTGACTTTGCTGGAGAGGCCAGATGGAAGTCTTTGGGCACAGTATTGTTTAAATTGGAGAATTTTCTATGTTGCTTATTTGTTTTCAGTAAAAAATGGATAGTGCTTAGATCAATTGAATTGGATTTGGTTCCTCCAAACTTGAGATTAGAGCTTTTCACAAAGGCCGGCTAA

Coding sequence (CDS)

ATGTTCAATGGGGTAGATGAGTATCTCGTCATTGTTGAGGATCTGACTAAAGGCCGGGGCTTTTTGTATCAAAATATTGAGCTTATGTGTATGGTAGCTGGGCATGCGAATTTCTTGTGTGAGATACGGTGGGAGATAAATGCAGACCAGGCTATTGCAATGTGCTCGCATATTCTGGATTTTGGTTTGCTTGACTTTGCTGGAGAGGCCAGATGGAAGTCTTTGGGCACAGTATTGTTTAAATTGGAGAATTTTCTATGTTGCTTATTTGTTTTCAGTAAAAAATGGATAGTGCTTAGATCAATTGAATTGGATTTGGTTCCTCCAAACTTGAGATTAGAGCTTTTCACAAAGGCCGGCTAA

Protein sequence

MFNGVDEYLVIVEDLTKGRGFLYQNIELMCMVAGHANFLCEIRWEINADQAIAMCSHILDFGLLDFAGEARWKSLGTVLFKLENFLCCLFVFSKKWIVLRSIELDLVPPNLRLELFTKAG*
Homology
[Close]
BLAST of CsaV3_1G031680 vs. NCBI nr
Match: KGN65464.1 (hypothetical protein Csa_019740 [Cucumis sativus])

HSP 1 Score: 252.3 bits (643), Expect = 2.1e-63
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MFNGVDEYLVIVEDLTKGRGFLYQNIELMCMVAGHANFLCEIRWEINADQAIAMCSHILD 60
           MFNGVDEYLVIVEDLTKGRGFLYQNIELMCMVAGHANFLCEIRWEINADQAIAMCSHILD
Sbjct: 1   MFNGVDEYLVIVEDLTKGRGFLYQNIELMCMVAGHANFLCEIRWEINADQAIAMCSHILD 60

Query: 61  FGLLDFAGEARWKSLGTVLFKLENFLCCLFVFSKKWIVLRSIELDLVPPNLRLELFTKAG 120
           FGLLDFAGEARWKSLGTVLFKLENFLCCLFVFSKKWIVLRSIELDLVPPNLRLELFTKAG
Sbjct: 61  FGLLDFAGEARWKSLGTVLFKLENFLCCLFVFSKKWIVLRSIELDLVPPNLRLELFTKAG 120

[Close]
BLAST of CsaV3_1G031680 vs. ExPASy TrEMBL
Match: A0A0A0LWV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423220 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MFNGVDEYLVIVEDLTKGRGFLYQNIELMCMVAGHANFLCEIRWEINADQAIAMCSHILD 60
           MFNGVDEYLVIVEDLTKGRGFLYQNIELMCMVAGHANFLCEIRWEINADQAIAMCSHILD
Sbjct: 1   MFNGVDEYLVIVEDLTKGRGFLYQNIELMCMVAGHANFLCEIRWEINADQAIAMCSHILD 60

Query: 61  FGLLDFAGEARWKSLGTVLFKLENFLCCLFVFSKKWIVLRSIELDLVPPNLRLELFTKAG 120
           FGLLDFAGEARWKSLGTVLFKLENFLCCLFVFSKKWIVLRSIELDLVPPNLRLELFTKAG
Sbjct: 61  FGLLDFAGEARWKSLGTVLFKLENFLCCLFVFSKKWIVLRSIELDLVPPNLRLELFTKAG 120

The following BLAST results are available for this feature:
BLAST of CsaV3_1G031680 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65464.12.1e-63100.00hypothetical protein Csa_019740 [Cucumis sativus][more]
BLAST of CsaV3_1G031680 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G031680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWV71.0e-63100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423220 PE=4 SV=1[more]
BLAST of CsaV3_1G031680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G031680.1CsaV3_1G031680.1mRNA