CsaV3_1G030230 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G030230
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	DUF4050 family protein
Location	chr1: 17011130 .. 17014765 (+)
RNA-Seq Expression	CsaV3_1G030230
Synteny	CsaV3_1G030230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGAAAAAGAAAGAGTCCATGAGTCCATGAGTCCATGACACATAAAATGCTTTGAATGAATATAAATGAAGGTCTAAGCAGTAGATAAAAAATAAATCACTATTTTCGCTGCCAATAATGGGAAGCAGTGAGTAGTGGGGGCCAAAGCCACACAAAAAGGGTGTATAAACCACTACCCAAAATCCACCAATTGAACTATCCATACTACCCCAACACAAATTCATTACTCCCAATTGATCCTTCCATACCAATCTCTTTTCTTCCCTAATTTTCTAGGAAACCCACCAATTTTCTTTTATGCTATTAGGTTGATTCTCAATTCCCACTCGAAAAAAGCTTTCCCCCTTTTCCCTCATCTAACTTTCAATTTTTCTTGCCCCAAAGTCCACTCTATCTCTTTCCAATTTCATTAACTGGGTTTTGGTTTTCCCCTCAATCCATGTTCTTCTCTGCGCTTTTCGCTTAATTTCAACCATGGTGATGCTCAATAGTTCTTTCGCTGCTTGGATCAGCCGCTTGTTTGCTTGCATGGGGTAAGTTCTTTTATCTTCCTTAACAATCATTCAATTGGGTTTTCGGAAACACTTGTTATATTTGCTCTTAATGGAATTCTGTGATGACCCTTTTGTGTTGGCTTTCTAATTGATTTTGTTTTCTCACTTACTGAGCAATGAACAATACCAAGGTTTTTGCTGTTAGAACTGTAATGTTGAGTTGAAATGTAAAAGGGGGTTTGGGGGAGAGTGTGGGATTTCTTGTTCTTTTTGGATTGCGAGTATTTGGTTATGTAAATCTTTCATTATAATGAAATAATTTTGATTGTTATTGGTATTGCATAGCTTGTTGAGTTTTTAATTTTGATTGTGTATGTCTATATTGCATTCCAAGTTGTGTGGAAATGGGGCCAATAGTATGAATAAATTTATTTGTTTGTTTTCTGGGCGAAGGAGGGTGGAAGCTAAGTCTTATTCCTTTTATGAGGCTGCCCTAAGAACTTTAATCACCTATGCGAAAGGTCAAGTGCTAAAGAAGCCATTATCGTCCATCATATATTATTATGACTTTAATTATTCACGGAAAGGAGTTAGTTCTATAATGACTACTTTAGTTACTTTTGAACATATTCTCTTTTGTTTTCATATTGGATCATTCTACTGCTGTGTGAATCCGTGGAGTCATTGTGGTCTTGCTGATTTAGTAGAATGAATTGATGTTAATGTGGATCCTTGAAAAATGAAACAAAATTATTACTGTTTGAAGTTTTTAATTGGAACTTGGAAATATGAAAGCATTCCCTATTCTTTGTTATGTAGAAGCTGAGTTTTGATTTTGAATAGTAGTCGAGTTGTTTAATTCCCTGCGCAGTCCTTCCCAGTTCCCTCTAAGCTCTTCTTTCACTTTTTTCTTTCCTGTTTAAATGATGTTATGCTTATAACTTCATCTGTAGATGCATAATCCATGTTGTCGCTCATTCTAGGTTTGCACTGATTTTTAACATACTTGGTCCATTTTCCAAAGTGTTCTTTTTGTGTTCATGGTGCCATCCATCCAATTCAATATGAGAACTTGAAAATTTTAGAATTATTCGATGATCACCGGAGAAGCACCGAACAAATACGAGATATGAACACGACATGGCATGATGACTCCTTTCTGTTTTTAAAATTTAGGACAGGCGTGGAAGGGACACTTTTATTAAAACATACATTTTAACAATATATATATTTTTTTAAACCAGAAAGCAATTCAAATCAGAAGTTTATGAATTTATATGCTTAAAAATTAGTTTGATGTATTTCATCCTCAAATTTTGTTCTTTGTGTCATCTATATATGTGTTTAATATATGATGGATGTTGATAAATGTTGGTTTGGTTCTATTTTAACTTCATATAATTAGTGTTTAGCACATCTATTGCATTAAGAAGTGTATGATACGTATCCAAGGGAAGTGTCTGAAATGTGTCAAATACAAACATGATAGCCAAACTAGTATTTAAGCTTCTTAGATGGCCACACTTCATTCAATTTATAGTATGCATTTTCATAATTTCTGTTGTCAATGGTTGTGTGTTTGCATCTTCATATTTTCAGTGAACCATAAATGATATTATTTGACAACTGTCTCAACATTGTTGATGATCAGGTGCACATGCTATGTTTTTGCTGCAATTTTATATCATATAGTGCTTTATTAGGTTTATAACAGTGCAGGGGTTGTTTTGGATGCTGCACTAAACCCACACCTATTATTGCTGTGGATGAGCCATCTAAAGGACTAAGAATTCAAGGACGAGTTGTTAAGAAACCTAGCATATCTGATGGTTTTTGGAGCACAAGCACATGCGATTTGGATAATAGCACCATTCAGTCTCAACGGAGCATCTCGTCTATCAGTACATCAAACCTCACTCTCAGTCATAGCAATGTTGCTGGCAGTGTGAGCAGCTCTTCCGAATTTGTAAATCATGGCAAGTTTCCCCTCTTATCAAACCTTGTTGAATATTTGGTAATAAAATAAAATGTCTGAAGTTTTGTAATATTCAAGGTCGTTAACTGGAATTAAGGATGACTATCATTACTTCAATAAAACCCGGTCAATGTAGAGACGAGGGAATTACTCATTTTTGTTTCCGTTTCTTTCAGGTCTCCTTCTCTGGAATCAGACTAGGATGCAGTGGATTGGAAGTGGTACTACTAAGACGACAGATGAAACTGAACAAAGACAGAAGGCAAAAATCAGGTCAGTTCACTCAATCTGGCTGCCTTTGTGAATAGTTGGCATCATTATTAAAACGCCATAGACATAAAAGTTGAGAACTAAAAATTTCCTTGTAGCTCATATTAATCTCTATACCGTGTGTACATATATGCATTTGTTTTGCAGTTGGCGTGCAACGTATGACAGTTTACTGGGTACAAGACAACCTTTTCCCCATCCAATTCCTTTGTCTGTAAGTTTGCTGTTGAAGCTGTGTCATTTCTTTCTCAACTGTTCATTGATTCTATGAATAAGAACTTCAAAATCTTTATTTCAACAGGAAATGGTCAACTTTCTTGTGGAAGTATGGGAACAGGAGGGTCTATACGATTGAAAATGCTTTTGTTTTTGGATACATTTCTTGAATCTTTAGGAAGCTTCTCTGTACGGAATGAAAAACGGTTTTTTTTTTTCTTTATCAACGATCCTACATTTTTCAGCTGTACAAATGTATTTAACACCAATGTGCTTGTGCACTTTTGGCTTTTTAAAACAGACAACAGAAGAAGCAACTGCCTTTGATTATGTTGAGTCAATATGTATTATTGGCATTCTTGAGAATATGGAATCTTATAGCCATC

mRNA sequence

ATGGTGATGCTCAATAGTTCTTTCGCTGCTTGGATCAGCCGCTTGTTTGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAACCCACACCTATTATTGCTGTGGATGAGCCATCTAAAGGACTAAGAATTCAAGGACGAGTTGTTAAGAAACCTAGCATATCTGATGGTTTTTGGAGCACAAGCACATGCGATTTGGATAATAGCACCATTCAGTCTCAACGGAGCATCTCGTCTATCAGTACATCAAACCTCACTCTCAGTCATAGCAATGTTGCTGGCAGTGTGAGCAGCTCTTCCGAATTTGTAAATCATGGTCTCCTTCTCTGGAATCAGACTAGGATGCAGTGGATTGGAAGTGGTACTACTAAGACGACAGATGAAACTGAACAAAGACAGAAGGCAAAAATCAGTTGGCGTGCAACGTATGACAGTTTACTGGGTACAAGACAACCTTTTCCCCATCCAATTCCTTTGTCTGAAATGGTCAACTTTCTTGTGGAAGTATGGGAACAGGAGGGTCTATACGATTGA

Coding sequence (CDS)

ATGGTGATGCTCAATAGTTCTTTCGCTGCTTGGATCAGCCGCTTGTTTGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAACCCACACCTATTATTGCTGTGGATGAGCCATCTAAAGGACTAAGAATTCAAGGACGAGTTGTTAAGAAACCTAGCATATCTGATGGTTTTTGGAGCACAAGCACATGCGATTTGGATAATAGCACCATTCAGTCTCAACGGAGCATCTCGTCTATCAGTACATCAAACCTCACTCTCAGTCATAGCAATGTTGCTGGCAGTGTGAGCAGCTCTTCCGAATTTGTAAATCATGGTCTCCTTCTCTGGAATCAGACTAGGATGCAGTGGATTGGAAGTGGTACTACTAAGACGACAGATGAAACTGAACAAAGACAGAAGGCAAAAATCAGTTGGCGTGCAACGTATGACAGTTTACTGGGTACAAGACAACCTTTTCCCCATCCAATTCCTTTGTCTGAAATGGTCAACTTTCTTGTGGAAGTATGGGAACAGGAGGGTCTATACGATTGA

Protein sequence

MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGSGTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD*

Homology

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BLAST of CsaV3_1G030230 vs. NCBI nr
Match: XP_004150590.1 (uncharacterized protein LOC101203426 isoform X2 [Cucumis sativus] >KAE8653102.1 hypothetical protein Csa_019993 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120
           TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120

Query: 121 GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
           GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 177

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BLAST of CsaV3_1G030230 vs. NCBI nr
Match: XP_038879580.1 (uncharacterized protein LOC120071390 [Benincasa hispida])

HSP 1 Score: 352.1 bits (902), Expect = 2.9e-93
Identity = 172/177 (97.18%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120
           TSTCDLDNSTIQSQRSISSISTSNLTLSHSNV GSVSSSSEFVNHGLLLWNQTR+QWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVGGSVSSSSEFVNHGLLLWNQTRLQWIGS 120

Query: 121 GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
            TTKTTDET+QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE EGLYD
Sbjct: 121 STTKTTDETQQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEHEGLYD 177

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BLAST of CsaV3_1G030230 vs. NCBI nr
Match: XP_008443992.1 (PREDICTED: uncharacterized protein LOC103487445 [Cucumis melo] >TYK06426.1 DUF4050 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 4.9e-93
Identity = 172/177 (97.18%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120
           TSTCDLDNSTIQSQRSISSIST NLTLS+SNVAGSVSSSSEF+NHGLLLWNQTRMQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTLNLTLSNSNVAGSVSSSSEFINHGLLLWNQTRMQWIGS 120

Query: 121 GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
           GTTK TDET+QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 GTTKLTDETQQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 177

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BLAST of CsaV3_1G030230 vs. NCBI nr
Match: KAA0050173.1 (DUF4050 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 346.3 bits (887), Expect = 1.6e-91
Identity = 174/186 (93.55%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHG---------LLLWN 120
           TSTCDLDNSTIQSQRSISSISTSNLTLS+SNVAGSVSSSSEFVNHG         LLLWN
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSNSNVAGSVSSSSEFVNHGKFPLLSNPCLLLWN 120

Query: 121 QTRMQWIGSGTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 178
           QTRMQWIGSGTTK TDET+QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE
Sbjct: 121 QTRMQWIGSGTTKLTDETQQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 180

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BLAST of CsaV3_1G030230 vs. NCBI nr
Match: KAG6589849.1 (hypothetical protein SDJN03_15272, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.5 bits (859), Expect = 2.8e-88
Identity = 164/177 (92.66%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 102 MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 161

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120
           TSTCDLDNSTIQSQRSISSISTSNLT S SNV GSVS+ SE+VNHGLLLWNQTR+QWIGS
Sbjct: 162 TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 221

Query: 121 GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
             T TTDET++RQKAKISWRATYDSLLGTRQPFPH IPLSEMVNFLVEVWEQEGLYD
Sbjct: 222 SNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278

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BLAST of CsaV3_1G030230 vs. ExPASy TrEMBL
Match: A0A5D3C7W3 (DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001290 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.4e-93
Identity = 172/177 (97.18%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120
           TSTCDLDNSTIQSQRSISSIST NLTLS+SNVAGSVSSSSEF+NHGLLLWNQTRMQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTLNLTLSNSNVAGSVSSSSEFINHGLLLWNQTRMQWIGS 120

Query: 121 GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
           GTTK TDET+QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 GTTKLTDETQQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 177

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BLAST of CsaV3_1G030230 vs. ExPASy TrEMBL
Match: A0A1S3B9E5 (uncharacterized protein LOC103487445 OS=Cucumis melo OX=3656 GN=LOC103487445 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.4e-93
Identity = 172/177 (97.18%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120
           TSTCDLDNSTIQSQRSISSIST NLTLS+SNVAGSVSSSSEF+NHGLLLWNQTRMQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTLNLTLSNSNVAGSVSSSSEFINHGLLLWNQTRMQWIGS 120

Query: 121 GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
           GTTK TDET+QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 GTTKLTDETQQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of CsaV3_1G030230 vs. ExPASy TrEMBL
Match: A0A5A7U2N6 (DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G002060 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 7.7e-92
Identity = 174/186 (93.55%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHG---------LLLWN 120
           TSTCDLDNSTIQSQRSISSISTSNLTLS+SNVAGSVSSSSEFVNHG         LLLWN
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSNSNVAGSVSSSSEFVNHGKFPLLSNPCLLLWN 120

Query: 121 QTRMQWIGSGTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 178
           QTRMQWIGSGTTK TDET+QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE
Sbjct: 121 QTRMQWIGSGTTKLTDETQQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 180

[Close]

BLAST of CsaV3_1G030230 vs. ExPASy TrEMBL
Match: A0A6J1H9M2 (uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC111461800 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.0e-88
Identity = 164/177 (92.66%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120
           TSTCDLDNSTIQSQRSISSISTSNLT S SNV GSVS+ SE+VNHGLLLWNQTR+QWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 120

Query: 121 GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
             T TTDET +RQKAKISWRATYDSLLGTRQPFPH IPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 SNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of CsaV3_1G030230 vs. ExPASy TrEMBL
Match: A0A6J1CTQ5 (uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014486 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.5e-87
Identity = 161/177 (90.96%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWS
Sbjct: 78  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWS 137

Query: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120
           TSTCDLDNSTIQSQRSISSISTSNLTL+ SNV GS S+ SEFVNHGLLLWNQ R+QW GS
Sbjct: 138 TSTCDLDNSTIQSQRSISSISTSNLTLNPSNVGGSTSNPSEFVNHGLLLWNQNRLQWTGS 197

Query: 121 GTTKTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
            ++KTTD+T+QR+KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 198 -SSKTTDQTQQRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 253

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BLAST of CsaV3_1G030230 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 222.2 bits (565), Expect = 3.2e-58
Identity = 107/174 (61.49%), Postives = 136/174 (78.16%), Query Frame = 0


Query: 4   LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTST 63
           L     +WI +LF CMGGCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTST
Sbjct: 3   LREIIPSWIYQLFGCMGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTST 62

Query: 64  CDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGSGTT 123
           C++DNST+QSQRS+SSIS +N    +++ + S S+ +EFVNHGL LWNQTR QW+ +GT+
Sbjct: 63  CEMDNSTLQSQRSMSSISFTN----NTSTSASTSNPTEFVNHGLNLWNQTRQQWLANGTS 122

Query: 124 KTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
           +   +  + ++  ISW ATY+SLLG  + F  PIPL EMV+FLV+VWEQEGLYD
Sbjct: 123 Q---KKAKVREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of CsaV3_1G030230 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 222.2 bits (565), Expect = 3.2e-58
Identity = 107/174 (61.49%), Postives = 136/174 (78.16%), Query Frame = 0


Query: 4   LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTST 63
           L     +WI +LF CMGGCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTST
Sbjct: 3   LREIIPSWIYQLFGCMGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTST 62

Query: 64  CDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGSGTT 123
           C++DNST+QSQRS+SSIS +N    +++ + S S+ +EFVNHGL LWNQTR QW+ +GT+
Sbjct: 63  CEMDNSTLQSQRSMSSISFTN----NTSTSASTSNPTEFVNHGLNLWNQTRQQWLANGTS 122

Query: 124 KTTDETEQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
           +   +  + ++  ISW ATY+SLLG  + F  PIPL EMV+FLV+VWEQEGLYD
Sbjct: 123 Q---KKAKVREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of CsaV3_1G030230 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-37
Identity = 86/158 (54.43%), Postives = 102/158 (64.56%), Query Frame = 0


Query: 22  CFGCCTKPTP-IIAVDEPSKGLRIQGRVVKKPSI-SDGFWSTSTCDLD-NSTIQSQRSIS 81
           CFGCC +    ++ VDEPSKGL+IQG++VKK S  SD FWSTSTCD+D N TIQSQ S  
Sbjct: 17  CFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQSQSSNP 76

Query: 82  SISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGSGTTKTTDETEQRQKAKIS 141
                           S S+S+EFVNHGL+LWN TR QW    T +     E      IS
Sbjct: 77  PFDPQ----------CSTSNSTEFVNHGLILWNHTRQQWRECLTRQQCLVPE----PAIS 136

Query: 142 WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLY 177
           W +TYDSLL T + FP PIPL EMV+FLV+VWE+EGLY
Sbjct: 137 WNSTYDSLLSTNKLFPQPIPLKEMVHFLVDVWEEEGLY 160

[Close]

BLAST of CsaV3_1G030230 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 82/162 (50.62%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 19  MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRS 78
           MGGC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S
Sbjct: 1   MGGCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGS 60

Query: 79  ISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGSGTTKTTDETEQRQKAK 138
           +SS   SN T    + A + ++  E+VN GLLLWNQTR +W+G    K  +  +  Q AK
Sbjct: 61  LSS---SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGK--DKPNNPVDHNQGAK 120

Query: 139 ISWR-ATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
           ++W  ATYDSLLG+ + FP PIPL+EMV+FLV++WEQEGLYD
Sbjct: 121 LNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

[Close]

BLAST of CsaV3_1G030230 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 82/162 (50.62%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 19  MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRS 78
           MGGC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S
Sbjct: 1   MGGCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGS 60

Query: 79  ISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGSGTTKTTDETEQRQKAK 138
           +SS   SN T    + A + ++  E+VN GLLLWNQTR +W+G    K  +  +  Q AK
Sbjct: 61  LSS---SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGK--DKPNNPVDHNQGAK 120

Query: 139 ISWR-ATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 178
           ++W  ATYDSLLG+ + FP PIPL+EMV+FLV++WEQEGLYD
Sbjct: 121 LNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

The following BLAST results are available for this feature:

BLAST of CsaV3_1G030230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150590.1	1.1e-95	100.00	uncharacterized protein LOC101203426 isoform X2 [Cucumis sativus] >KAE8653102.1 ...	[more]
XP_038879580.1	2.9e-93	97.18	uncharacterized protein LOC120071390 [Benincasa hispida]	[more]
XP_008443992.1	4.9e-93	97.18	PREDICTED: uncharacterized protein LOC103487445 [Cucumis melo] >TYK06426.1 DUF40...	[more]
KAA0050173.1	1.6e-91	93.55	DUF4050 family protein [Cucumis melo var. makuwa]	[more]
KAG6589849.1	2.8e-88	92.66	hypothetical protein SDJN03_15272, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_1G030230 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G030230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C7W3	2.4e-93	97.18	DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3B9E5	2.4e-93	97.18	uncharacterized protein LOC103487445 OS=Cucumis melo OX=3656 GN=LOC103487445 PE=...	[more]
A0A5A7U2N6	7.7e-92	93.55	DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6...	[more]
A0A6J1H9M2	3.0e-88	92.66	uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC1114618...	[more]
A0A6J1CTQ5	7.5e-87	90.96	uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of CsaV3_1G030230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25360.1	3.2e-58	61.49	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25360.2	3.2e-58	61.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G32342.1	1.8e-37	54.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15350.2	1.6e-36	50.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15350.1	1.6e-36	50.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025124	Domain of unknown function DUF4050	PFAM	PF13259	DUF4050	coord: 136..177 e-value: 4.6E-13 score: 49.9 coord: 62..133 e-value: 3.5E-10 score: 40.5
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 1..177
None	No IPR available	PANTHER	PTHR33373:SF13	DUF4050 FAMILY PROTEIN	coord: 1..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G030230.1	CsaV3_1G030230.1	mRNA