CsaV3_1G024110 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G024110
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 13598860 .. 13599062 (-)
RNA-Seq ExpressionCsaV3_1G024110
SyntenyCsaV3_1G024110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCGCCTCTCATCAATTGTAGATCGAAGCTTGGGCGAGATTCGAGATTTGCACAGTGGTGGGAGAACGAACGTTCATCGAAGCTTGGGCATGGTAGAAGATTCGGGCACAGATGAATCGGAGCTTGGACGTGGTGGATGGGCTATTAGACGCTTGGGCGTTGTGGCGTGGAGGATGGCCGTCTACAGCTTTCAGGGAAGATG

mRNA sequence

CATCGCCTCTCATCAATTGTAGATCGAAGCTTGGGCGAGATTCGAGATTTGCACAGTGGTGGGAGAACGAACGTTCATCGAAGCTTGGGCATGGTAGAAGATTCGGGCACAGATGAATCGGAGCTTGGACGTGGTGGATGGGCTATTAGACGCTTGGGCGTTGTGGCGTGGAGGATGGCCGTCTACAGCTTTCAGGGAAGATG

Coding sequence (CDS)

CATCGCCTCTCATCAATTGTAGATCGAAGCTTGGGCGAGATTCGAGATTTGCACAGTGGTGGGAGAACGAACGTTCATCGAAGCTTGGGCATGGTAGAAGATTCGGGCACAGATGAATCGGAGCTTGGACGTGGTGGATGGGCTATTAGACGCTTGGGCGTTGTGGCGTGGAGGATGGCCGTCTACAGCTTTCAGGGAAGATG

Protein sequence

HRLSSIVDRSLGEIRDLHSGGRTNVHRSLGMVEDSGTDESELGRGGWAIRRLGVVAWRMAVYSFQGRX
Homology
[Close]
BLAST of CsaV3_1G024110 vs. NCBI nr
Match: KAE8652947.1 (hypothetical protein Csa_017765, partial [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  HRLSSIVDRSLGEIRDLHSGGRTNVHRSLGMVEDSGTDESELGRGGWAIRRLGVVAWRMA 60
          HRLSSIVDRSLGEIRDLHSGGRTNVHRSLGMVEDSGTDESELGRGGWAIRRLGVVAWRMA
Sbjct: 1  HRLSSIVDRSLGEIRDLHSGGRTNVHRSLGMVEDSGTDESELGRGGWAIRRLGVVAWRMA 60

Query: 61 VYSFQGR 68
          VYSFQGR
Sbjct: 61 VYSFQGR 67

The following BLAST results are available for this feature:
BLAST of CsaV3_1G024110 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652947.11.5e-29100.00hypothetical protein Csa_017765, partial [Cucumis sativus][more]
BLAST of CsaV3_1G024110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G024110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G024110 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G024110.1CsaV3_1G024110.1mRNA