CsaV3_1G018470 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTCTGCCCCACGATTTTATTTGGTGCGGGTAGTTCTGCCAACTTAACTTCAACAACATGGGTAAAGGAAAAAACTATGGGGTTTCAACCACGAAGCGTGTCCACGCAAAAGGCAGAAGTTGTGCCCACGTTTTTCTTAAGATCTACCAACATTTCTCTATGCGTTGATAAAGGCCAAAATTCTTGTAGCGCCGATCTTCTCCAAAGAGGTAGTTCATGGGTTGCTATTAGCCAATTAGTAAAAGAAAAGCTTAAATTTAATTCTAATAGTAAATTTATGTTTATATTTAAGACGTAGTGCATGTTTTAATTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTAATCTTATGCAAGTTCTGTGTATATTTAGTATTTTCGGTCTGATGGAGTGGAATATGTATTCTTGGAGTCGAGGATCACTTCCTTCACATTTTGAATTTTCTAGGATTAATTCAAAGAGCGATTGATTAGCTTTCAGTTTCGAACTAGAGCCGGCAGAGATTAATGGATTCGGAATTTGTTGGTGGAACAAACTTGATGAGACTAAGGAGTTGAGATGAGTCAAGCAAGAAAAAACTCTTTTATGTTTAGACAATTACTGTATCTCTCAAGACTGAGTAGAGTTGTAGAAGTTGATTATGTCATGCCATGAAATTGAGGAAGAAACAAAAGAAAATTTTATTTTCTTCTCCACTGGCTTTTAGAGTCTAAGAGATGATGACTCCACACAAGTAAGAGGGTCAAAATTATTTTTGAGAAGTTAATGAAATATCATAACTTTAATGACTGAAATATGCTTCCTTCCTGCTCTGGTTTAATCTGTGTTTGGTATGGACTTTCAATACCTTCAGTTAAGTAATAAAACACTTTCTAAATTCTGCCATGTCATCCAGCTAGACACACCTCAAAAAGCATCGTAAGAAGCACCGAAGTATTTATGGAGTAGTAAACATTTGATTAGTTTTTGAAGTCTACTAAAAAACTATGTTACCCTTTTTTTTTATGAGAAAGAAGAACCCTTGTTACCACAAACAGGATAAAGATTGAAAACATTCCCAATGCATAATGAGGGATGTAAAACGATAATCACAAAAGTACTAAGAGAATTTACAGCAAGAGATAGTAAGATAAAATAAGATGTTAAAAAAAAAGAGTTTAAATTCGCAGCCTTTACCTTAGAAATGATTTTACTTACAAACATTACTCCAAAAGTTATGCTCAATATAATTTTTGTTGCTCCCAAATTATCTTAGACTCTTGAGTGCCTTTTATTTTTACTCTCATACACACATCACCAAAATTTTCCTGAAGAGACTCTTTATCTTTATCTCGTGTACAGGTCACAGATTTTCAAGGCAATGGTTGTTCATTTTAGAGAAAATGGAAATCAATGGTAGCAATCCTCATTTGAATGGAAATGGGAATCATTCTTCAGGCGATTCAAAGGTTGCCTTAAATGGAAAGTCTAGTAAGATGCCCACATTCATCAATCACGGTAAATCTGCTTCCCTCGATCCATATATTGTCAAGATGAAGTGTTCAATATCAATATATATCGTACTCTGTGGTGATTTGTCCATCAGATTTACAAACAAAATATCCTCCTAAATGTCGTGTTGGTGCATCATAGTTTTCTTACAGCTGAGATAACTTGGCATGAAAGAAGAAGAGAATGGCGATCGTTCTGAAAATGTGCACGAGAACCAATGGAACCAATCTTAAAGTATTCATTTAAATTATTTAAATCCTTGGAGGCAGTTTGGTTTTGTCTGTGTAAAGTAAGAAAAGCATACCTATTGATTAATTTTGACTTAGCCCACTCACTTAAGTTTTTAGTTTGAGGAGTAATTGTTTCACTTAAGTTTTTAGTTTGAGGAGTAATTGTTGATATTTATTTGATGTTGATCGATGTAGGATCACAGTAACAGGAAACAACAAAAAATACAGCAGTAGTAAATAGCAGCAACAACAACACTACGTAGTGACAATAGTTTAGAGTATCGTAAAGTAACTCGTAGTTTTGAACTTTACTTCTAATGTTATTGCACACACAGTATTATTTGAGTGAAGTTCTAAACTAGCTCGTGTTTTATGATCTTGCACGTATATCCCAGTTTAATGAATACTCTAAGAATCTGTTCAGAATTCCATAGGAAGCGGCCCTTACTTTAACATTCACAAAAGTGAATCTATCAAGAGTACTCCTATAGCTAGGTACCCTACTTGATATCAAGTACAGATTTCATTAAGAACAAAAGTTCGGTCTCCTCATACGGTTTTGGATATCATGCTAATCACTGAATCATAAGAATGGAACTCCTAACTTAGCATGATTCTCATTATATTACATGTGATCAGTTATTACCCATTGAACTTGTTTATTAGGGTTTTGAGTCTTACAAGATTTGAGCATAATTTGTGATCAAACCTTGAAACGTATATAACAAGTTATTTGGCAGATCAGACGACTCAATGTTGCCGACATAGGTTGAAGACGCATTTGACGTAGACGACGATGACAAGACAATGATGTCATAAGAAAATGCTTAATTTGTAAATCTATTTTTTTATTCATATAAATTTCAATTTAAATGTAGAATTATACGAAAATGCATTTTTATTTGCATCAAAC ATTTTCTGCCCCACGATTTTATTTGGTGCGGGTAGTTCTGCCAACTTAACTTCAACAACATGGGTAAAGGAAAAAACTATGGGGTTTCAACCACGAAGCGTGTCCACGCAAAAGGCAGAAGTTGTGCCCACGTTTTTCTTAAGATCTACCAACATTTCTCTATGCGTTGATAAAGGCCAAAATTCTTGTAGCGCCGATCTTCTCCAAAGAGGTCACAGATTTTCAAGGCAATGGTTGTTCATTTTAGAGAAAATGGAAATCAATGGTAGCAATCCTCATTTGAATGGAAATGGGAATCATTCTTCAGGCGATTCAAAGGTTGCCTTAAATGGAAAGTCTAGTAAGATGCCCACATTCATCAATCACGACGACTCAATGTTGCCGACATAG ATTTTCTGCCCCACGATTTTATTTGGTGCGGGTAGTTCTGCCAACTTAACTTCAACAACATGGGTAAAGGAAAAAACTATGGGGTTTCAACCACGAAGCGTGTCCACGCAAAAGGCAGAAGTTGTGCCCACGTTTTTCTTAAGATCTACCAACATTTCTCTATGCGTTGATAAAGGCCAAAATTCTTGTAGCGCCGATCTTCTCCAAAGAGGTCACAGATTTTCAAGGCAATGGTTGTTCATTTTAGAGAAAATGGAAATCAATGGTAGCAATCCTCATTTGAATGGAAATGGGAATCATTCTTCAGGCGATTCAAAGGTTGCCTTAAATGGAAAGTCTAGTAAGATGCCCACATTCATCAATCACGACGACTCAATGTTGCCGACATAG IFCPTILFGAGSSANLTSTTWVKEKTMGFQPRSVSTQKAEVVPTFFLRSTNISLCVDKGQNSCSADLLQRGHRFSRQWLFILEKMEINGSNPHLNGNGNHSSGDSKVALNGKSSKMPTFINHDDSMLPT* Homology
BLAST of CsaV3_1G018470 vs. NCBI nr
Match: KAE8652888.1 (hypothetical protein Csa_017670, partial [Cucumis sativus]) HSP 1 Score: 265.8 bits (678), Expect = 2.0e-67 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CsaV3_1G018470 vs. NCBI nr
Match: XP_031736039.1 (uncharacterized protein LOC116401719 [Cucumis sativus]) HSP 1 Score: 213.8 bits (543), Expect = 9.0e-52 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CsaV3_1G018470 vs. NCBI nr
Match: XP_008442713.1 (PREDICTED: uncharacterized protein LOC103486506 isoform X1 [Cucumis melo] >XP_008442714.1 PREDICTED: uncharacterized protein LOC103486506 isoform X1 [Cucumis melo] >KAA0043988.1 uncharacterized protein E6C27_scaffold236G003340 [Cucumis melo var. makuwa] >TYK25152.1 uncharacterized protein E5676_scaffold352G002770 [Cucumis melo var. makuwa]) HSP 1 Score: 77.4 bits (189), Expect = 1.0e-10 Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of CsaV3_1G018470 vs. NCBI nr
Match: XP_031739473.1 (uncharacterized protein LOC101221441 isoform X1 [Cucumis sativus]) HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10 Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of CsaV3_1G018470 vs. NCBI nr
Match: XP_004137841.1 (uncharacterized protein LOC101221441 isoform X2 [Cucumis sativus] >KGN58990.1 hypothetical protein Csa_000823 [Cucumis sativus]) HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10 Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of CsaV3_1G018470 vs. ExPASy TrEMBL
Match: A0A1S3B705 (uncharacterized protein LOC103486506 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486506 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 4.9e-11 Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of CsaV3_1G018470 vs. ExPASy TrEMBL
Match: A0A5A7TM85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002770 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 4.9e-11 Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of CsaV3_1G018470 vs. ExPASy TrEMBL
Match: A0A0A0LAJ4 (DUF4050 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G740820 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 6.4e-11 Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of CsaV3_1G018470 vs. ExPASy TrEMBL
Match: A0A6J1F1Z4 (uncharacterized protein LOC111441458 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441458 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 8.3e-11 Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0
BLAST of CsaV3_1G018470 vs. ExPASy TrEMBL
Match: A0A6J1J1B8 (uncharacterized protein LOC111481794 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481794 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 7.8e-09 Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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