CsaV3_1G018360 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G018360
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 11944290 .. 11944469 (-)
RNA-Seq ExpressionCsaV3_1G018360
SyntenyCsaV3_1G018360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATGGGATATTTTGTGGAGGGATAGGCAGAAGAGGAGTTGCCAGAAAGACTGTTCAACGCTGTCTGGAGTTACCAATTGGAGATGTTTTGGCGATTGCCGTAGAGGCACCGACATTGGCACGTGGAGTATCATGTACAAAGGTGAATCACCACAAACTTGGCAATGAAGACGATAACTG

mRNA sequence

ATATGGGATATTTTGTGGAGGGATAGGCAGAAGAGGAGTTGCCAGAAAGACTGTTCAACGCTGTCTGGAGTTACCAATTGGAGATGTTTTGGCGATTGCCGTAGAGGCACCGACATTGGCACGTGGAGTATCATGTACAAAGGTGAATCACCACAAACTTGGCAATG

Coding sequence (CDS)

ATATGGGATATTTTGTGGAGGGATAGGCAGAAGAGGAGTTGCCAGAAAGACTGTTCAACGCTGTCTGGAGTTACCAATTGGAGATGTTTTGGCGATTGCCGTAGAGGCACCGACATTGGCACGTGGAGTATCATGTACAAAGGTGAATCACCACAAACTTGGCAATG

Protein sequence

IWDILWRDRQKRSCQKDCSTLSGVTNWRCFGDCRRGTDIGTWSIMYKGESPQTWQX
Homology
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BLAST of CsaV3_1G018360 vs. NCBI nr
Match: KAE8647985.1 (hypothetical protein Csa_023962, partial [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 2.5e-27
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  IWDILWRDRQKRSCQKDCSTLSGVTNWRCFGDCRRGTDIGTWSIMYKGESPQTWQ 56
          IWDILWRDRQKRSCQKDCSTLSGVTNWRCFGDCRRGTDIGTWSIMYKGESPQTWQ
Sbjct: 1  IWDILWRDRQKRSCQKDCSTLSGVTNWRCFGDCRRGTDIGTWSIMYKGESPQTWQ 55

The following BLAST results are available for this feature:
BLAST of CsaV3_1G018360 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647985.12.5e-27100.00hypothetical protein Csa_023962, partial [Cucumis sativus][more]
BLAST of CsaV3_1G018360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G018360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G018360 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G018360.1CsaV3_1G018360.1mRNA