CsaV3_1G015850 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTATAGTTCTAATTGCATCAACTCAACGTGCACAATGCAACACTTTGAAGGCAAAGATTTCTTGCCTTGATTGTCAATCCAACTATGACTTCTCAGGTTAATACCATAATCCTCTGATTTTGTTGTTTATGCATTTGTTCTTCTCTCTCTCTCCACGATGGTTTTACTTGTAATCATATATGAAATTTAGGTCAATATTCGTTTTCTTTATCTTGAAAAAGAGATGTTTTCACTGCAACAAATTGAACTTTCGCTGACTCCTGAATGATAGCAAATGGAGTTTTTAAGAAAAGTCAAACTTTTTGGGTAAGATTTTCACTGTCATGGTAGAGTTTTTAAAGTTTTACGAGAGTTCTTTTGTGGTCAGATTTTTGCTGTCAAGGTATGTTTATTTGACAGAAATAGTCAGCTTTCAAACTATTTATTGACAATAATAAATTTTCATCTAAAATGTTACCATTACGACCATCACCTAAGGGTCTAAAGAAAAAAATATATTTTTCAAACTCATTTTTGTTTAAAATCTTTTTCTTAAAAATTATTTATAAGGTATTATTTAAAATATACCTTAAAAATTATTTTTGAGTTTTTTTTTTTCAAAATAATTTATTTTCTAAATTAAACATAATCCAAATGATTATTGTTGATTAAATTCAAAATTCATAAAACAACCAATTCTAACATTTTCTTTCACGAATTATCTATATACACTTATTTGTTACAAGACTAAAACAAGAGTCACCAAAAGTAGTAATATCCTTTTTACACTGTCATATCTAAACCTATTTTTTTGTAGTATTGTTTTATTTAAAAATGTTTATGAATGATTTTGGGTGTTTCTTAAATTTAATTTTTATTTTTTAAAAAAGAAAGAACTAGTGGTGTTTGATTTAGAATTTAAAAGTGGTTAAAAGTGTGTGTCACAATTAATGGTGCATTCTATCTTTTAATGACAACACAAGTGGTTTTGAACATTTTAATATGAAAATAAGGAATACAGTTTTCTTAGAAGAAACATTTTTAATTAATTTCCTTTGGATGTGCTTATATAGCAAGTGCTTCACTTAATATAAACATTTCAGCTACTCTCTAAAGTCAAAATTATTGTAGTCAGATTTAACAATGTTTGTTAAAAATGTTAATTAAATGTCCTCAAAGGTGTTTCCTTTGTTCTCAAAAAGGAAATAGTTGTGTTCATCGTACAATTTTAAAACTGTTGTTCGTGACAATTGTGAGGGTGTATTTTATTTGCACGAGAAATATCAACTTACATCCCAAACCTAAAACTATAGACGCTTAACTAATAGTTATATCAATTTAAATCATGAATTTTAAAATTTGTATTCATTTAGACCTCAAACAAATAATTGTATCAATTAATCTCGAACTTTTATAAGTATATCATTTTAAATTCCGAACTTACGTGATAGTATCAAATTAAATCATCCATTATATTATGTTTTATTTGGATACACTTGTAAAGTTAATTTATGTAAGTTCAAGGTTTAATTTAATATAATTGTGAAAGTTCAAAATTTTAAATTGATACAACTGCAAAGATGCTCGATGTTTAAATTGATATCATTATTAGTTGATAGTCTAAACTGAATACAATCCTACAGTTTAGGGTGTTAATTGATATTTGTCATTATCTTTTATTGTTCGGTGACAAAAAGTGTGTCATGGTGTGAAGTTCTAAAAACATATGGATGAGAGATATCGTTTTCTTTTATAGAAACACTATTTAATTGATTTTCTTTGTGACACGTTTTTGGTTAAACAAGTGCTTCACCTAGGGCTCGTCTAATAACGATATTATTTTTCATTTCTCGTTTTTCGTTCTTTGTTCCTTGTTTCTTATTTTTTTTGGTGAATTAGTAACAGAAATATGTCTGGTAACCATTCATGTGTTTTTGTTGTTCAAAAAAGAAAAAGAAAAAAAAATACAAATGTATTTGAATTGTTTGTTTCTCGTTTCATACATTCATGTGTTCTAACATTTTCTCTAATTTGATAGTTTTATAATTTATGCATACACTGTATGTAATGTAAATGAATTCAAATATAAAAATAGTTATAAAACATTTACATTATTGAGTACATATAAGTCTGGATACAAATGTTAATAAGTATATAATATAATCGTTTTCATTATTCATATGTTGCTAATCTTCTACAAGTCATTTATCTCACATGTTGACTAAAATCCAACTCAATATTATTAGGTAAATGTTGTGTTGTAAAATATCAAAAGTGAACCTAAATTAATATTTTAGTAAACAAAAGTAGGAAATTTAAAAGCGGATAGTCCTCTAATAGTCCTTTGATATATAACCGTTTGATATATCTAATTACTTAGCTTGTTACATTTGTCATATTTGCAATATGCAAAAAAAAAAAAATTATGTTATAAACTATTTTTTAATTTTTTTCATCTAATACAATTTTTCAATCTAAATATTGAAAATTTAAAATTTAAAATTATGGTATAGATATCCAAGAATAAAAAAACATTAAAGTAAAATATAAATATATAAAAAAAAGTAAATAACAAGCTAGAGTAACATATAAATATAAATAAAAATAGAAAGTTTAAAAATAAAATTTACTCAATTCATAAAAAAGAACTTATTTAAAATAAATATTTAGAAGTGTTTCAAATGGTTTGGGAAAGGCATATTTAAAAAGAAATGAGTACTTTTAGGAGAAAATTATAAGAGAAATAATTACTAGAAAGAAAAACAATACTAAACTACTCTACCTATGATTGCATTCATTTCCTCATATTTTAGGAAACTTGATCATGGTGAAGTGTGAGAGAGCAAAAAACTTAACAATAGCAATAACCAAAGCCGATGGATCATTCGAAACTTCGCTTCCATCCAACATGGCCTCCGAAGCAGCTCCTTCTTCTCCCAAGTGCATAGCCAAGCTCCTTGGAGGTTCTCACCAGCTCTTTGCTTCAAGGAAAGAGATGGTTTCTACTATCATCAAAGAAACCAACTCCAAGTTCTTCACAATTGCCACTGCTCTCAAGTTCTCAACATGCAAAGAAATCAGTAGAAACTGCAAAGCCATAAAGAAGGAGTCTGTTGAAGATTCAAAAACCTTTGATTTCCCTTTGCCGCCTGAGTGGGGCTTCCCACCCACAAGCTACTACATCCCTGTGCTTCCTATCATAGGCATTCCTTGA ATGTTTATAGTTCTAATTGCATCAACTCAACGTGCACAATGCAACACTTTGAAGGCAAAGATTTCTTGCCTTGATTGTCAATCCAACTATGACTTCTCAGGAAACTTGATCATGGTGAAGTGTGAGAGAGCAAAAAACTTAACAATAGCAATAACCAAAGCCGATGGATCATTCGAAACTTCGCTTCCATCCAACATGGCCTCCGAAGCAGCTCCTTCTTCTCCCAAGTGCATAGCCAAGCTCCTTGGAGGTTCTCACCAGCTCTTTGCTTCAAGGAAAGAGATGGTTTCTACTATCATCAAAGAAACCAACTCCAAGTTCTTCACAATTGCCACTGCTCTCAAGTTCTCAACATGCAAAGAAATCAGTAGAAACTGCAAAGCCATAAAGAAGGAGTCTGTTGAAGATTCAAAAACCTTTGATTTCCCTTTGCCGCCTGAGTGGGGCTTCCCACCCACAAGCTACTACATCCCTGTGCTTCCTATCATAGGCATTCCTTGA ATGTTTATAGTTCTAATTGCATCAACTCAACGTGCACAATGCAACACTTTGAAGGCAAAGATTTCTTGCCTTGATTGTCAATCCAACTATGACTTCTCAGGAAACTTGATCATGGTGAAGTGTGAGAGAGCAAAAAACTTAACAATAGCAATAACCAAAGCCGATGGATCATTCGAAACTTCGCTTCCATCCAACATGGCCTCCGAAGCAGCTCCTTCTTCTCCCAAGTGCATAGCCAAGCTCCTTGGAGGTTCTCACCAGCTCTTTGCTTCAAGGAAAGAGATGGTTTCTACTATCATCAAAGAAACCAACTCCAAGTTCTTCACAATTGCCACTGCTCTCAAGTTCTCAACATGCAAAGAAATCAGTAGAAACTGCAAAGCCATAAAGAAGGAGTCTGTTGAAGATTCAAAAACCTTTGATTTCCCTTTGCCGCCTGAGTGGGGCTTCCCACCCACAAGCTACTACATCCCTGTGCTTCCTATCATAGGCATTCCTTGA MFIVLIASTQRAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERAKNLTIAITKADGSFETSLPSNMASEAAPSSPKCIAKLLGGSHQLFASRKEMVSTIIKETNSKFFTIATALKFSTCKEISRNCKAIKKESVEDSKTFDFPLPPEWGFPPTSYYIPVLPIIGIP* Homology
BLAST of CsaV3_1G015850 vs. NCBI nr
Match: XP_004139493.1 (uncharacterized protein LOC101207654 [Cucumis sativus] >KGN64941.1 hypothetical protein Csa_022696 [Cucumis sativus]) HSP 1 Score: 328.2 bits (840), Expect = 4.2e-86 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. NCBI nr
Match: XP_031737339.1 (uncharacterized protein LOC116402231 [Cucumis sativus] >KAE8652846.1 hypothetical protein Csa_022898 [Cucumis sativus]) HSP 1 Score: 328.2 bits (840), Expect = 4.2e-86 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. NCBI nr
Match: XP_008461260.1 (PREDICTED: uncharacterized protein LOC103499896 [Cucumis melo]) HSP 1 Score: 287.7 bits (735), Expect = 6.3e-74 Identity = 149/170 (87.65%), Postives = 158/170 (92.94%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. NCBI nr
Match: XP_038895206.1 (uncharacterized protein LOC120083500 [Benincasa hispida]) HSP 1 Score: 255.4 bits (651), Expect = 3.5e-64 Identity = 130/167 (77.84%), Postives = 146/167 (87.43%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. NCBI nr
Match: KAA0035490.1 (uncharacterized protein E6C27_scaffold285G001410 [Cucumis melo var. makuwa] >TYK31036.1 uncharacterized protein E5676_scaffold455G002910 [Cucumis melo var. makuwa]) HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55 Identity = 116/133 (87.22%), Postives = 123/133 (92.48%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. ExPASy TrEMBL
Match: A0A0A0LYA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165730 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 2.0e-86 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. ExPASy TrEMBL
Match: A0A1S3CDU1 (uncharacterized protein LOC103499896 OS=Cucumis melo OX=3656 GN=LOC103499896 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.0e-74 Identity = 149/170 (87.65%), Postives = 158/170 (92.94%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. ExPASy TrEMBL
Match: A0A5A7SWT1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002910 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 8.3e-56 Identity = 116/133 (87.22%), Postives = 123/133 (92.48%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. ExPASy TrEMBL
Match: A0A6J1CMJ0 (uncharacterized protein LOC111012639 OS=Momordica charantia OX=3673 GN=LOC111012639 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.7e-54 Identity = 108/166 (65.06%), Postives = 138/166 (83.13%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. ExPASy TrEMBL
Match: A0A6J1G179 (uncharacterized protein LOC111449745 OS=Cucurbita moschata OX=3662 GN=LOC111449745 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 1.0e-53 Identity = 111/167 (66.47%), Postives = 133/167 (79.64%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. TAIR 10
Match: AT5G22430.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22 Identity = 64/166 (38.55%), Postives = 98/166 (59.04%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. TAIR 10
Match: AT2G27385.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 97.8 bits (242), Expect = 8.6e-21 Identity = 57/166 (34.34%), Postives = 80/166 (48.19%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. TAIR 10
Match: AT2G27385.2 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 97.8 bits (242), Expect = 8.6e-21 Identity = 57/166 (34.34%), Postives = 80/166 (48.19%), Query Frame = 0
BLAST of CsaV3_1G015850 vs. TAIR 10
Match: AT2G27385.3 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 97.8 bits (242), Expect = 8.6e-21 Identity = 57/166 (34.34%), Postives = 80/166 (48.19%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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