CsaV3_1G015160 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G015160
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Poly(A)-specific ribonuclease
Location	chr1: 10779568 .. 10785574 (-)
RNA-Seq Expression	CsaV3_1G015160
Synteny	CsaV3_1G015160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGGGACTCGTCTGTAACGACTCGGTCAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCACCAAAAACTTCCAAAAGATTTAGAACAGTTCCTCGGCGTTGTTAGGCTCTTCTTCGGCGATAACGTGTACGACATGAAGTACTTGATGCGCTTCTGCCAGAGTCTATACGGCGGTTTGGACCGGATTGCGAAAACTATGAATGTGAACCGGGCGGTTGGAAAGTGCCATCAAGCCGGCTCAGATAGCTTGCTAACGTGGCATGCCTTTCAAAAGATGAGAGATACCTTTTTTGTACAGACTGAAATGCACAAACATGCTGGGGTTTTGTACGGATTAGAGGTCTTCTAATCTAAATTGTACCTTAAATAAATTTAATTTAAATACTATATACCCATTTATTATTAATTACTAATTTCCACTTCTTTTATTTAATTTCTTGAAAGGTAAAGTCTATGGAATGAAGCTATAGATGCAGGTCATTTTGGAGTCAATATTACTCAAAATATAACTACATTACTATAATGTATAATAAGTAAATATTATAGCCTCCGTTTGATAACCCTTATGGCTTCAAGACAATGGTGCATCCAAACACTCATCTTCCTAAATCTCTATCTAAGTTACCTATTATGAAATATCTTCCAACATTTTCATCCCTTCCAATTAACATACACAGATTTGAATTTCTCTATTTTCAAATTTTCCTTTTCTGTGATTTAACTTTATTTTTTAAAAATTTGTATCTAAATTGTTTTTCTTTTATCTTTTATATTCTTAAATCATAATTATCCTTTTTTTCCATTAAAATCTACGTTTTTATCTGGCCAGAGTTTCGTTATTATCTCTCCAAGTAAATGACTGAGTTCATCCTCCAAAATCTTCCCATCCACATCCTTCCAAAAATGCAACTCTTGGACCTATTTGTATGGCTATCATGAGTTTAAATTTTAAATTTTAGTACTAGGTAGAAGTTTCAGTGGCGATTATTAGCTTAGTTGTATTAAGTATCCACATGATTCCGTGGAAAATATAGTGATCTAGTGTGTTCAGTCAATAATTTTTGGTTATAAAGTTTTTGGTTTGACCAAACCGAACTTAAATAGGCACCTACGTGTATAAAAATAATCTGACAATCTACACTACACAATCCATATTATAAGGGTTGGGGTTTAGTTGTGTTTAGAAATTTTGTTTTTTTCGAGTTGGGTTGGGTCTCGAGTTGCGAGTTGAAAATTTTGGTACAACCCAATCCAATCTTAATTAATGATATATATATATATATATGTATATTTATATTTATATTATATTATACATTATTAATTTATTAAAAGTAAATTTAGGTCACTTCTAAAGCAGTCTCACTCTTTCACGTCGCCTCACTTCATGTCTCTCTACTTTACCATCTTCATTCTCCTCTCGTCTTAGCTTCTCATCCAGGTCGTCATTGGTGTTACCCTCTCCCTCTCGTCTCGACTTCTCCTTCTCAGTGTTCATCGTCGTCGACTTCTCATTTCACCATCTCTTTCGGCATTCTCCCAATCTACCTCTCGGAGTACTTCATGTATGTATGACTCGTACCTAAGTTAGAAGGTTAAAATTTTGTTACGTGTAAAATTGGGCGTTTTGAATGATAAGAGAATAAGGAAAGTTGAGGTTTGGCGAAGCAACAAGATTGCACGACAAGAATTGAAGTTAGCACTTAAGTTAGGTACGCGTTAAGGGAAGGTTACGCGATAGGACTTCTAGGTGTTTGAGTGTTACTATGCGATTAAGGTACTATGCAAGACGAATAAGATTAGGCGAGAAGAAGTAATGACACTTCCTAAAAATCTTCTAAGTTTATTTAATGGACCACGTGTAGAGATTAAGTTAAGCATGATTAATTAAGTATAACCTAAAGCTTACACGTGCATCACTAAGGGTAGGAGTTGGTGTGCTGGGAAGAGTTTAAAAATGACTAAGCTTGTTTAAGGAGTAGTATAAATAGAGGTTGAGCAAAATTGAAGAGGAAGCTCAAGGGCTGAAGTGTTGTCAAAGTGTCTACTCGAAAAAAAGAAGAAGAACATTTCGAGTTTAAGTTATTTAGTATAGTGAGTGTTTTCTACAAAGTATTTTCATAATTTTGAGCCTTTTTAGTAAAATGTTTACTAATTTTGAAATGATGATTCTGATATCCATGTTTCTAAAGTATTTTCATGGGTGCACTAACTACCCTTGCCATAAATGAGAAACATACCTTAGGACATGTCCACATTAGTGAGACTACCCCTGCCAGACTTCTCAATCAAATTAGACCAAGACTCCTACTTTGGGTGTTATTGCTCAGTCAAGTATGCCTCGGTCTTGTGGGCTTATTAGCGTTGATGGGAAAAATCTCTGGATTTTAGACTCACGAGCTACAGATCACTTGACAGATTCTTCAGAGCATTTTATCTCTTATGCCCCAGCCCGTGTGTCGATTATGAAAAAATCTGGATAGTCGACAGCTCTCTAGCCCCTATCACTGGCAAAGGACAAATAGCTCCCTTTGATGGTTTTATTGTCCAAAATGTTTTGCATGAGCCTAAATTGTCTTATAATTTGCTATGTATAAGCAGGATCACTAGTGAGATGCATTGTAAAGCTATCTTCTTACCTAAATCTGTTTGTTTTCAAGACATGAGCTTGGAAATGATGATTGACATTGTTTGGCATCATAGTGGAGGACTTTACATTCTTGATAATGATACCTCCAGTAGCAGTTTGTCTAGGACTAGTTCATTGTCTTCCTACTTTAGCACTTCTAAGCATGATTGTATGTTGTGGCATTTTCGGTTAGGCCACCCAAACTTTACATATATATGCAATATTTGTTTCCCATCTTTTTTCTAAACTTGATGTCTCCTCTTTATCTTGTGATGTGTGTATCTGGGCAAAACAACACCGAGTTTCATTTTTCTGACAACCATATAAACCTACACAATCGTTTACCCTAATCCATAGTGACATTTGGGGTACTTCCAATGTCACCACCTCATCGGAAAAATGGTGGTTTGTAACTTTCATTGATGATCATACCCGTCTGATCTGGGTCTACCTTATCACCGATAAATATGAGATTTCATCTATTTTTCAAAACTTTTATCACACCATTGAAACACAATTCCATACAAAAAAATGCAATTCTTGGGAGTGATAATGGTAGGGAATTCCAAAACCATAACCTTAGCGAATTCCTAGCCTCCAAGGCAATTGTTCACCAAAACTCATGCGACTACACTCCAACAAAATGGGGTGGTCGAGCGAAAAAAATCGTCATCTTCTAAAAATAACCTATTATTATTTTATTCAAAATTGGAGAATTCCACCTTGATATCTTTATATGCATGTTGTTGTTGTTGTTGCTGCTGCTGCCACTGCCATCTGTATGATCAAGCAAGACATGGTCTAGTGATGAATAATAATATATATTATATTTTTAAATTAAAAATCCATTTATTTATTCCTTATTACTAATACATCGTGAAGTCTATAATGCATAATAGTGATAGATATAAAATTTTGCTATATTTTATAAATATATATTTTTATTATATTATTTATGAAAATGTCCCAAAAAATAAATCTATTTTGGTAAAAGGTTATCATATCTTTAAGAATTAAGATGTCCAATTTTTTCATGAAAATGGGATGGGTCCCCCCTTAAGCGAGAAAAGGGGGAGGGAGTGGAAAAGAAAGTTCTCACTAACCTAAATGGGGATGGGTTACCAATGTATTCTTCCTTACCCTCTATTTATTTATTTAATTACTATAACTATTTAATGTTACATTTTCTAATCTTTAATCTTATGTTATTATTATTATTTTATAAATATTACATTTAAATGCGAGAATTCGTCCATATTTGACCAAATATTTACATATTTCATACACAAAAATCAAAGGTATTAAATTAATTTAATTTGTCTTCTAGTGTTTTTGTCTTATCCAATATAAATAATTTGTAATTTTTTTTTTTTTAAAGAAAACTCATTTAAATTTCAACTTCAGTTGTTTATTGGTCAAAATAAATGAATATGTTTAAGTTTAATATTTAAATTTAGATTATACATGTGAATAATTTGATTAACATTTTTTGAAAGGGTGAGTAATTTGTCTTTAAATTTAAATTATCACGTAGAACTAACCATATTGAACAATTTAACAATAGAGTCAGTTATTTGATTAATATTTACCAACATTAATAATTTAAATTATTTGCTTTTCTAAAAACAATTGACGGAAGAAAATTTCGACAAAAAATGTCGAACTTGATCCAACGAAAATGTCGATAGAGATGGAGAGTGAAACAAGAGAGTGGGACGCAGGAAATGACATCCTGGATCCTACGTTGCCTATGTCCATGCACATCTCTATGCATCAAAAACCCTAAACTAAATAAATTTAAATTTGGAAGAAAAAATAGAAATGTTAAATGCAAAATAATACATTAAGGGCAAACATAATCTAAAGCATTAAAGATAAGGGGGAGAAATAACTCTCTAAGACTTATTATAATAATAATATTTAATATTATTATTATATAAAAATTAAAACAATAATATCGATCTCTAACCTAAATTTAAATGAAAATTTTTGTGTTGAGTGGAGAGTCGGTGTCATGATATGTTTAGAAAAATGTCAAAATCATATTTGTAATGATACTGGTAAGAGGTTTCATTATAATTTTAATTAATATTTGCCAACTTTTATATGATAATATTTTTCTTTTATATGGGTAGAATAGAAAAAGGTTAAAAAGAGGATGCAACTATGCATTTATTAAATTTGATTACTTAATTGTTTCTTAATTATAGTGCTGAATGTCCATTTTACTTACAATATTATAGTAATAGAGTTCCCAACCATCCAATTTTTTAACCCCTCTTCTCCTCCTCCTCAATACCAACTAGCTACTTTAACAAGGTCTCACTTACCTTCTTCTAATCTCAAAAGGAAACTATTCGTAAACCAAATGAAATACCCAACCTCTAGCATCAAAATAAGTTGTGTATTATGAAAAAGAAAATTAGATATAACTTTTTAAATGAACATATTGTAGTGTGTTTTATAATTTTTTCTTCATCTCTAACTCACTCCCACACTCCTAATCTCTCCTACCTCAGATCTTAAGATGATCTATCCATACCCATAGTCCAAAACACTTCATTTATTTGAATTTTATGTACAAAGTTAAGATAAGGAAGAGAGGGAAAGAAAAGAGTATTGACTTTGATTATTACAATTAATTTTTTAAAAAAAAAAGAAAGAAAAAAGAAAAAAGAAAAAAGGAAAAAGTTTTAGTGCAGTCGAGGGTACGCCAATGTCTACAACCTTTAAATTTTTTTATACGACACGAATTTGAATGTATACAACTTTGAAGGCCACATCTCACTCAACTACAAAAGCCTAACCCACACACCAAAACGCTCTCTCAATTATGTCTAACATCCGGAAGAACAAGTTTTTTACAACCATTTTCTCCTCCACCGCCGGCTGTGGCGGCTGTCAAAAGCCAAAACTCTCTGACATCGTCCAACCTGACAAGAAACCCCCCACCACCATCGTCAGACGCTCCTCTTCAAGCTCCAGCACTGATCAGAACGGCACCTTCTCTCTCGACGAAGACTACACCAGCTCCGCTTCCAAATCCACGGGAACCCAAAGCCCGGTGGCTATTCTCATCGGCGACAGCATCGCGGTCGAGAAGGATTCCGACGACCCATACGAGGATTTTCGGGGATCGATGGTTGAGATGATAGTGGAGAAGAGAATTTACTCTCCCAACGGCCTTCAAGAGCTTCTGAATTGCTTCCTCCATCTCAATTCTCCTTACCACCACGAAATAATCGTGAAAGCGTTCACTCAAATTTCAAATGAGTTTGAATCGTCCCACCGTCTTTGGAATATGTCTAATAATACGGACTGGAAAAGGCGGTCCGGCGGTGAAGGTTGA

mRNA sequence

ATGTCATCGGGACTCGTCTGTAACGACTCGGTCAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCACCAAAAACTTCCAAAAGATTTAGAACAGTTCCTCGGCGTTGTTAGGCTCTTCTTCGGCGATAACGTGTACGACATGAAGTACTTGATGCGCTTCTGCCAGAGTCTATACGGCGGTTTGGACCGGATTGCGAAAACTATGAATGTGAACCGGGCGGTTGGAAAGTGCCATCAAGCCGGCTCAGATAGCTTGCTAACGTGGCATGCCTTTCAAAAGATGAGAGATACCTTTTTTGTACAGACTGAAATGCACAAACATGCTGGGGTTTTGTACGGATTAGAGAACAAGTTTTTTACAACCATTTTCTCCTCCACCGCCGGCTGTGGCGGCTGTCAAAAGCCAAAACTCTCTGACATCGTCCAACCTGACAAGAAACCCCCCACCACCATCGTCAGACGCTCCTCTTCAAGCTCCAGCACTGATCAGAACGGCACCTTCTCTCTCGACGAAGACTACACCAGCTCCGCTTCCAAATCCACGGGAACCCAAAGCCCGGTGGCTATTCTCATCGGCGACAGCATCGCGGTCGAGAAGGATTCCGACGACCCATACGAGGATTTTCGGGGATCGATGGTTGAGATGATAGTGGAGAAGAGAATTTACTCTCCCAACGGCCTTCAAGAGCTTCTGAATTGCTTCCTCCATCTCAATTCTCCTTACCACCACGAAATAATCGTGAAAGCGTTCACTCAAATTTCAAATGAGTTTGAATCGTCCCACCGTCTTTGGAATATGTCTAATAATACGGACTGGAAAAGGCGGTCCGGCGGTGAAGGTTGA

Coding sequence (CDS)

ATGTCATCGGGACTCGTCTGTAACGACTCGGTCAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCACCAAAAACTTCCAAAAGATTTAGAACAGTTCCTCGGCGTTGTTAGGCTCTTCTTCGGCGATAACGTGTACGACATGAAGTACTTGATGCGCTTCTGCCAGAGTCTATACGGCGGTTTGGACCGGATTGCGAAAACTATGAATGTGAACCGGGCGGTTGGAAAGTGCCATCAAGCCGGCTCAGATAGCTTGCTAACGTGGCATGCCTTTCAAAAGATGAGAGATACCTTTTTTGTACAGACTGAAATGCACAAACATGCTGGGGTTTTGTACGGATTAGAGAACAAGTTTTTTACAACCATTTTCTCCTCCACCGCCGGCTGTGGCGGCTGTCAAAAGCCAAAACTCTCTGACATCGTCCAACCTGACAAGAAACCCCCCACCACCATCGTCAGACGCTCCTCTTCAAGCTCCAGCACTGATCAGAACGGCACCTTCTCTCTCGACGAAGACTACACCAGCTCCGCTTCCAAATCCACGGGAACCCAAAGCCCGGTGGCTATTCTCATCGGCGACAGCATCGCGGTCGAGAAGGATTCCGACGACCCATACGAGGATTTTCGGGGATCGATGGTTGAGATGATAGTGGAGAAGAGAATTTACTCTCCCAACGGCCTTCAAGAGCTTCTGAATTGCTTCCTCCATCTCAATTCTCCTTACCACCACGAAATAATCGTGAAAGCGTTCACTCAAATTTCAAATGAGTTTGAATCGTCCCACCGTCTTTGGAATATGTCTAATAATACGGACTGGAAAAGGCGGTCCGGCGGTGAAGGTTGA

Protein sequence

MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYTSSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCFLHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG*

Homology

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BLAST of CsaV3_1G015160 vs. NCBI nr
Match: KAE8652819.1 (hypothetical protein Csa_022741 [Cucumis sativus])

HSP 1 Score: 589.7 bits (1519), Expect = 1.3e-164
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM
Sbjct: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL
Sbjct: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120

Query: 121 YGLENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDE 180
           YGLENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDE
Sbjct: 121 YGLENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDE 180

Query: 181 DYTSSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELL 240
           DYTSSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELL
Sbjct: 181 DYTSSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELL 240

Query: 241 NCFLHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG 290
           NCFLHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG
Sbjct: 241 NCFLHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG 289

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BLAST of CsaV3_1G015160 vs. NCBI nr
Match: KAE8637551.1 (hypothetical protein CSA_004618 [Cucumis sativus])

HSP 1 Score: 511.5 bits (1316), Expect = 4.7e-141
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM
Sbjct: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL
Sbjct: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120

Query: 121 YGLENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDE 180
           YGLENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDE
Sbjct: 121 YGLENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDE 180

Query: 181 DYTSSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELL 240
           DYTSSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELL
Sbjct: 181 DYTSSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELL 240

Query: 241 NCFLHLNSPYH 252
           NCFLHLNSPYH
Sbjct: 241 NCFLHLNSPYH 251

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BLAST of CsaV3_1G015160 vs. NCBI nr
Match: XP_004139591.1 (transcription repressor OFP6 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 8.6e-87
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 124 ENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYT 183
           +NKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYT
Sbjct: 6   KNKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYT 65

Query: 184 SSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCF 243
           SSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCF
Sbjct: 66  SSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCF 125

Query: 244 LHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG 290
           LHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG
Sbjct: 126 LHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG 171

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BLAST of CsaV3_1G015160 vs. NCBI nr
Match: XP_008463639.1 (PREDICTED: transcription repressor OFP6 [Cucumis melo] >KAA0035569.1 transcription repressor OFP6 [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 4.0e-76
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 124 ENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYT 183
           +NKFFTTIFSSTAGCG CQKPKLSDIVQP+KKPPTTIVRRSSSSSSTD NGTFSLDEDY 
Sbjct: 6   KNKFFTTIFSSTAGCGRCQKPKLSDIVQPNKKPPTTIVRRSSSSSSTDHNGTFSLDEDY- 65

Query: 184 SSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCF 243
           SSASKSTG+QSPVAILI DSIAVEKDSDDPYEDFR SMV+MIVEKRIYSPNGLQELLNCF
Sbjct: 66  SSASKSTGSQSPVAILICDSIAVEKDSDDPYEDFRRSMVQMIVEKRIYSPNGLQELLNCF 125

Query: 244 LHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG 290
           LHLNSPYHHEII+KAFTQISNEFESSHRLWN+SN+ +WK RS GEG
Sbjct: 126 LHLNSPYHHEIILKAFTQISNEFESSHRLWNISNDNEWKPRSAGEG 170

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BLAST of CsaV3_1G015160 vs. NCBI nr
Match: XP_004139505.1 (LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus] >XP_031745377.1 LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-66
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM
Sbjct: 152 MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 211

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL
Sbjct: 212 RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 271

Query: 121 YGLE 125
           YGLE
Sbjct: 272 YGLE 275

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BLAST of CsaV3_1G015160 vs. ExPASy Swiss-Prot
Match: Q9FMS6 (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.6e-51
Identity = 93/125 (74.40%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSGL+CN+SVSWVTFHSAYDFGYLVKILT ++LP  L +FLG++R FFGD VYD+K++M
Sbjct: 152 MSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIM 211

Query: 61  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGV 120
           RFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV+    KHAGV
Sbjct: 212 RFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVEDGAEKHAGV 271

Query: 121 LYGLE 125
           LYGLE
Sbjct: 272 LYGLE 276

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BLAST of CsaV3_1G015160 vs. ExPASy Swiss-Prot
Match: Q9LXM2 (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-48
Identity = 89/125 (71.20%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSGLVCN+ VSWVTFHSAYDFGYL+KILT ++LP  L +F  V+R+ FG+ VYD+K++M
Sbjct: 154 MSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMM 213

Query: 61  RFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGV 120
           +FC+  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ    KHAGV
Sbjct: 214 KFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGPEKHAGV 273

Query: 121 LYGLE 125
           LYGLE
Sbjct: 274 LYGLE 278

[Close]

BLAST of CsaV3_1G015160 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.7e-33
Identity = 69/123 (56.10%), Postives = 94/123 (76.42%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ ++F   VYD+K+LM
Sbjct: 146 MSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLM 205

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           +FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVL
Sbjct: 206 KFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFV-GPLHKYSGVL 265

Query: 121 YGL 124
           YGL
Sbjct: 266 YGL 265

[Close]

BLAST of CsaV3_1G015160 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 3.7e-32
Identity = 68/123 (55.28%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+    F  ++ ++F   VYD+K+LM
Sbjct: 147 MSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYF-PRVYDIKHLM 206

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           +FC SL+GGL+++A+ ++V R VG CHQAGSDSLLT   F+K+++ FF+ + M K++GVL
Sbjct: 207 KFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKLQENFFIGS-MEKYSGVL 266

Query: 121 YGL 124
           YGL
Sbjct: 267 YGL 266

[Close]

BLAST of CsaV3_1G015160 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-30
Identity = 67/123 (54.47%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSG+V ND++SWVTFH  YDFGYLVK+LT ++LP     F  ++ ++F   VYD+K+LM
Sbjct: 146 MSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYF-PTVYDIKHLM 205

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
            FC  L+GGL+R+A+ M V R VG CHQAGSDSLLT  +F+K+++ +F      K+ GVL
Sbjct: 206 TFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKLKERYF-PGSTEKYTGVL 265

Query: 121 YGL 124
           YGL
Sbjct: 266 YGL 265

[Close]

BLAST of CsaV3_1G015160 vs. ExPASy TrEMBL
Match: A0A0A0LSS9 (Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_1G168910 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 4.2e-87
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 124 ENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYT 183
           +NKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYT
Sbjct: 6   KNKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYT 65

Query: 184 SSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCF 243
           SSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCF
Sbjct: 66  SSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCF 125

Query: 244 LHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG 290
           LHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG
Sbjct: 126 LHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG 171

[Close]

BLAST of CsaV3_1G015160 vs. ExPASy TrEMBL
Match: A0A5A7T2H1 (Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G002400 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-76
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 124 ENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYT 183
           +NKFFTTIFSSTAGCG CQKPKLSDIVQP+KKPPTTIVRRSSSSSSTD NGTFSLDEDY 
Sbjct: 6   KNKFFTTIFSSTAGCGRCQKPKLSDIVQPNKKPPTTIVRRSSSSSSTDHNGTFSLDEDY- 65

Query: 184 SSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCF 243
           SSASKSTG+QSPVAILI DSIAVEKDSDDPYEDFR SMV+MIVEKRIYSPNGLQELLNCF
Sbjct: 66  SSASKSTGSQSPVAILICDSIAVEKDSDDPYEDFRRSMVQMIVEKRIYSPNGLQELLNCF 125

Query: 244 LHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG 290
           LHLNSPYHHEII+KAFTQISNEFESSHRLWN+SN+ +WK RS GEG
Sbjct: 126 LHLNSPYHHEIILKAFTQISNEFESSHRLWNISNDNEWKPRSAGEG 170

[Close]

BLAST of CsaV3_1G015160 vs. ExPASy TrEMBL
Match: A0A1S3CK77 (Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103501739 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-76
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 124 ENKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYT 183
           +NKFFTTIFSSTAGCG CQKPKLSDIVQP+KKPPTTIVRRSSSSSSTD NGTFSLDEDY 
Sbjct: 6   KNKFFTTIFSSTAGCGRCQKPKLSDIVQPNKKPPTTIVRRSSSSSSTDHNGTFSLDEDY- 65

Query: 184 SSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCF 243
           SSASKSTG+QSPVAILI DSIAVEKDSDDPYEDFR SMV+MIVEKRIYSPNGLQELLNCF
Sbjct: 66  SSASKSTGSQSPVAILICDSIAVEKDSDDPYEDFRRSMVQMIVEKRIYSPNGLQELLNCF 125

Query: 244 LHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG 290
           LHLNSPYHHEII+KAFTQISNEFESSHRLWN+SN+ +WK RS GEG
Sbjct: 126 LHLNSPYHHEIILKAFTQISNEFESSHRLWNISNDNEWKPRSAGEG 170

[Close]

BLAST of CsaV3_1G015160 vs. ExPASy TrEMBL
Match: A0A0A0LYC8 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_1G168920 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM
Sbjct: 152 MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 211

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL
Sbjct: 212 RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 271

Query: 121 YGLE 125
           YGLE
Sbjct: 272 YGLE 275

[Close]

BLAST of CsaV3_1G015160 vs. ExPASy TrEMBL
Match: A0A5A7T1W0 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001920 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 116/124 (93.55%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLPK LE+FLGVVR+FFGDNVYDMKY+M
Sbjct: 156 MSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMM 215

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVL
Sbjct: 216 RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVL 275

Query: 121 YGLE 125
           YGLE
Sbjct: 276 YGLE 279

[Close]

BLAST of CsaV3_1G015160 vs. TAIR 10
Match: AT5G22250.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 203.4 bits (516), Expect = 2.5e-52
Identity = 93/125 (74.40%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSGL+CN+SVSWVTFHSAYDFGYLVKILT ++LP  L +FLG++R FFGD VYD+K++M
Sbjct: 152 MSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIM 211

Query: 61  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGV 120
           RFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV+    KHAGV
Sbjct: 212 RFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVEDGAEKHAGV 271

Query: 121 LYGLE 125
           LYGLE
Sbjct: 272 LYGLE 276

[Close]

BLAST of CsaV3_1G015160 vs. TAIR 10
Match: AT3G44260.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-49
Identity = 89/125 (71.20%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSGLVCN+ VSWVTFHSAYDFGYL+KILT ++LP  L +F  V+R+ FG+ VYD+K++M
Sbjct: 154 MSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMM 213

Query: 61  RFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGV 120
           +FC+  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ    KHAGV
Sbjct: 214 KFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGPEKHAGV 273

Query: 121 LYGLE 125
           LYGLE
Sbjct: 274 LYGLE 278

[Close]

BLAST of CsaV3_1G015160 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-34
Identity = 69/123 (56.10%), Postives = 94/123 (76.42%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ ++F   VYD+K+LM
Sbjct: 146 MSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLM 205

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           +FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVL
Sbjct: 206 KFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFV-GPLHKYSGVL 265

Query: 121 YGL 124
           YGL
Sbjct: 266 YGL 265

[Close]

BLAST of CsaV3_1G015160 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-34
Identity = 69/123 (56.10%), Postives = 94/123 (76.42%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ ++F   VYD+K+LM
Sbjct: 146 MSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLM 205

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           +FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVL
Sbjct: 206 KFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFV-GPLHKYSGVL 265

Query: 121 YGL 124
           YGL
Sbjct: 266 YGL 265

[Close]

BLAST of CsaV3_1G015160 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-34
Identity = 69/123 (56.10%), Postives = 94/123 (76.42%), Query Frame = 0


Query: 1   MSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLM 60
           MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ ++F   VYD+K+LM
Sbjct: 146 MSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLM 205

Query: 61  RFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVL 120
           +FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVL
Sbjct: 206 KFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFV-GPLHKYSGVL 265

Query: 121 YGL 124
           YGL
Sbjct: 266 YGL 265

The following BLAST results are available for this feature:

BLAST of CsaV3_1G015160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652819.1	1.3e-164	100.00	hypothetical protein Csa_022741 [Cucumis sativus]	[more]
KAE8637551.1	4.7e-141	100.00	hypothetical protein CSA_004618 [Cucumis sativus]	[more]
XP_004139591.1	8.6e-87	99.40	transcription repressor OFP6 [Cucumis sativus]	[more]
XP_008463639.1	4.0e-76	90.36	PREDICTED: transcription repressor OFP6 [Cucumis melo] >KAA0035569.1 transcripti...	[more]
XP_004139505.1	2.2e-66	100.00	LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 11 [Cucumis sativ...	[more]

BLAST of CsaV3_1G015160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMS6	3.6e-51	74.40	Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9LXM2	1.7e-48	71.20	Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	5.7e-33	56.10	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SKZ2	3.7e-32	55.28	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	1.2e-30	54.47	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CsaV3_1G015160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSS9	4.2e-87	99.40	Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_1G168910 PE=4 SV=1	[more]
A0A5A7T2H1	1.9e-76	90.36	Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3CK77	1.9e-76	90.36	Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103501739 PE=4 SV=1	[more]
A0A0A0LYC8	1.1e-66	100.00	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_1G168920 PE=3 SV...	[more]
A0A5A7T1W0	1.2e-62	93.55	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of CsaV3_1G015160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22250.1	2.5e-52	74.40	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44260.1	1.2e-49	71.20	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	4.1e-34	56.10	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	4.1e-34	56.10	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	4.1e-34	56.10	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..123 e-value: 4.2E-41 score: 142.8
IPR006458	Ovate protein family, C-terminal	TIGRFAM	TIGR01568	TIGR01568	coord: 204..263 e-value: 2.2E-20 score: 70.7
IPR006458	Ovate protein family, C-terminal	PFAM	PF04844	Ovate	coord: 210..263 e-value: 1.2E-22 score: 79.7
IPR006458	Ovate protein family, C-terminal	PROSITE	PS51754	OVATE	coord: 206..265 score: 17.50876
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..190
None	No IPR available	PANTHER	PTHR10797:SF48	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED	coord: 1..125
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..125
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G015160.1	CsaV3_1G015160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity