CsaV3_1G013470 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G013470
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 8777736 .. 8778081 (+)
RNA-Seq ExpressionCsaV3_1G013470
SyntenyCsaV3_1G013470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATGAAGGCATTTTTTCAAACACCTTCAAGTGCACGATCGAACTTATTGTTACTCAGAAAAGGACCTTTCTACTCATTCTAGTCGCCACCCTCTCTTCAACAAGTCGTCATCGTCCGCTTTGGGTCTCGTTCGTTTGTTGTCATGTCTCCTAGTCGCCATCTCGACACAGCCGTAGATTGAAAGCTCAACGACTATTTGACTCTCTTACATCCATTCCTTGCACCATTGCCAACTCCAGTTTTTGACTCTCTTACATCCATTCCTTGCACCATTGCCAACTCCAGTTTTCCTTCGCCGTTCAAGTCGCACCATCATAGCAGGTGTTTCACCGGATTATAG

mRNA sequence

TCGCCATCTCGACACAGCCGTAGATTGAAAGCTCAACGACTATTTGACTCTCTTACATCCATTCCTTGCACCATTGCCAACTCCAGTTTTCCTTCGCCGTTCAAGTCGCACCATCATAGCAGGTGTTTCACCGGATTATA

Coding sequence (CDS)

TCGCCATCTCGACACAGCCGTAGATTGAAAGCTCAACGACTATTTGACTCTCTTACATCCATTCCTTGCACCATTGCCAACTCCAGTTTTCCTTCGCCGTTCAAGTCGCACCATCATAGCAGGTGTTTCACCGGATTATA

Protein sequence

SPSRHSRRLKAQRLFDSLTSIPCTIANSSFPSPFKSHHHSRCFTGLX
Homology
[Close]
BLAST of CsaV3_1G013470 vs. NCBI nr
Match: KAE8652756.1 (hypothetical protein Csa_023790, partial [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-17
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1  SPSRHSRRLKAQRLFDSLTSIPCTIANSSFPSPFKSHHHSRCFTGL 47
          SPSRHSRRLKAQRLFDSLTSIPCTIANSSFPSPFKSHHHSRCFTGL
Sbjct: 1  SPSRHSRRLKAQRLFDSLTSIPCTIANSSFPSPFKSHHHSRCFTGL 46

The following BLAST results are available for this feature:
BLAST of CsaV3_1G013470 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652756.11.2e-17100.00hypothetical protein Csa_023790, partial [Cucumis sativus][more]
BLAST of CsaV3_1G013470 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G013470 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G013470 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G013470.1CsaV3_1G013470.1mRNA