CsaV3_1G013210 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G013210
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 8531295 .. 8531486 (+)
RNA-Seq ExpressionCsaV3_1G013210
SyntenyCsaV3_1G013210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACGATTGGGACGGGGCTACCGGTGAGAACCCGGCGTTGCAGATCTGGACAACGGCGCGGTGAGACGGTTGTGTCTGGCTGGGTTTGGACGGAACAGAGAGGAGAAAAGAGGGAGACAGCCGGCGATGCAGATCTGGACGACGGTTGTGAGCGGAGGGCGTGGCGGTTTTGGCTTCGACGGAGATAG

mRNA sequence

ATGGAGACGATTGGGACGGGGCTACCGGTGAGAACCCGGCGTTGCAGATCTGGACAACGGCGCGGTGAGACGGTTGTGTCTGGCTGGGTTTGGACGGAACAGAGAGGAGAAAAGAGGGAGACAGCCGGCGATGCAGATCTGGACGACGGTTGTGAGCGGAGGGCGTGGCGGTTTTGGCTTCGACGGAGATAG

Coding sequence (CDS)

ATGGAGACGATTGGGACGGGGCTACCGGTGAGAACCCGGCGTTGCAGATCTGGACAACGGCGCGGTGAGACGGTTGTGTCTGGCTGGGTTTGGACGGAACAGAGAGGAGAAAAGAGGGAGACAGCCGGCGATGCAGATCTGGACGACGGTTGTGAGCGGAGGGCGTGGCGGTTTTGGCTTCGACGGAGATAG

Protein sequence

METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWLRRR*
Homology
[Close]
BLAST of CsaV3_1G013210 vs. NCBI nr
Match: KGN64773.1 (hypothetical protein Csa_013529 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 2.4e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL 60
          METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL
Sbjct: 1  METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL 60

Query: 61 RRR 64
          RRR
Sbjct: 61 RRR 63

[Close]
BLAST of CsaV3_1G013210 vs. ExPASy TrEMBL
Match: A0A0A0LSK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096080 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL 60
          METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL
Sbjct: 1  METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL 60

Query: 61 RRR 64
          RRR
Sbjct: 61 RRR 63

The following BLAST results are available for this feature:
BLAST of CsaV3_1G013210 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64773.12.4e-29100.00hypothetical protein Csa_013529 [Cucumis sativus][more]
BLAST of CsaV3_1G013210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G013210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSK81.1e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096080 PE=4 SV=1[more]
BLAST of CsaV3_1G013210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G013210.1CsaV3_1G013210.1mRNA