CsaV3_1G012640 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G012640
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionD-aminoacyl-tRNA deacylase
Locationchr1: 7897356 .. 7901995 (-)
RNA-Seq ExpressionCsaV3_1G012640
SyntenyCsaV3_1G012640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCATTCCTAGAGGCTACAATTTTACAAAATCCCAATCCCCAAAAAGAAGCAAAAAAAGAATGAATAGCGTAGCAAACCTGCCATTGTTCGCAGCCAGCGTAAGTACCAAGCGGACCACAGTATTCCGCTTCAGCAACAACAAACTACGCCCCATTAGATCCATGAGAGCTGTTGTCCAGCGAGTCGCCTCTGCAAGCGTCCAGGTCTCCTCTCTCTCTCTCTTTTCCTCTCTTAATGCTTTTCTAAATCGCCGGTGTGAGATACTGCATTTCACAGGTCGATGGCCGCACCGTTTCAGAGATCGGCCCAGGTCTCCTCGTGCTCGTCGGCCTTCACGACTCCGACTCCGACACCGACGCTGAATACATGTAATCTACTCAACCATCTCTCACCCCTCCCTCTCTTTTCTATACTGATTCCATCCGGCATTAAAACTTCTTTTCAAATTGGGTTTCAGATGCCGTAAGGTCCTAAATATGAGGTTGTTCCCAAATGAGAGTACCGGCAAAGCTTGGGACTTAAACGTAATTTAATTATACAAACACTCCTTGCCTCCTTATTCCGAATTAAACAAAAGCTTCAGGATTTGCTTTACTACTTTCCTTGATATTTCTTCCAGGTGATGCAGAAAAACTACGAGGTTCTATTAGGTAAGTGAAAAAAGGTTTGGGCTTTGCTTCGAAGTTTGTACCTAGAATGTGAATTGGAGTTAATCCACTAATTAACTTATACTTGGTGGATTGCAACCAGTCAGCCAGTTTACACTGTACGGAATGTTGAAGGGGAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCTAAACCTTTTTACGCTTCTGTGGTCGAGAGGTTCGGTAAATCCTACAACCCAGATGCGATAAAAGGTAACCTATCTTTCCTAATATGAAATTCAGTCAATATGCTAAATAGGAACGGGTTCAACCAGTAGTATAAAGAGTTTACTGAATCTTGTCTTTGTTCCCTTTTCCTGTGGGTAGATGGAGTGTTTGGAGCAATGATGAAGGTAATCTCACTATGCTCAGTTTTGGATTCCGAGTAACTCTGATATTTACTAGAGTATACAGTTTTGATGTTTTGGGCACTGATGTTTGAGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATTGACTCCCAACCGTCTAAGTAAGGAAATCTACCAATATATGAGCTCTCCTTCCTGCTGCAGTATGTTCAGGAAAATGGTAGTTTGACTGTGATTTTCTCATTCATTTCAGGAATACAGTTGAGGCTTCAGAAGACTCGTAATTGGTTTCGACAATTTAAGATCTGACTGGGATTCTTTGTGGGCTAACAAGTTGGAGTTGCTTGATGGGCTGAAAGATTCTTTACATCAAGGTGTAGATGTTTATGTCCTCTTGTGCTTGGCCGTGGGGTTGTATGCAAACTTGCTCCTCTGACAATTGACAATATCTAATTTTCTTTCTCATACCTTTTCATCTCTAAGACCAGAGCAAGCTCCCAAGGCTTTGCTGAGAATCCTTTGGAGGACTTAAAAAAATTGTTCAGCTCCCACTGTTAGTTTTAACCTCTTCAGGTTTAAACTTAATAAATGTCAGCAAAATCAAGATCAATAACCATGAGCTAATTTACAAGATGCAAATAAAGTACATCGTTATTTTGGAGGGTGGTAGGCTCATGTAAAATAAACTTCTTATGAACATGATACAAATGGTTTTGAATTAATAAACCATTCGTACTCTAGAATGCTTAAGTGAGAATACTTAGTACGATGAACACTGAATATTCTAATCAAGTGGCTGGAAGATACTGGATTAGTGTTATATGATCTACTCAACTAGGTTAAGATTAACTACGAAATAGGTAATGAAAGATATCTCAATACTGCTTTATTGTTCGTCTATATTAACTTTGACAAAAGGATGGCTCCTGCTACTGTAGGTGACCCTCGTACATCTTCTCAAGAAGTAAGTTCATTCGACCTCTATAACTTTTTGGACATGATTGTTGCAGCAACAAAAATGGCCTCTTTTGCGCATGATGAAATTTCCAACTGCCTGCATTGTGACAATTTTAAATTTTGAAAAGGGAGCCAGGTTGAAAATCTACCTCAAAATTATAGCAACTATGATGCAGCATGTTAAAAGCTAAATTAGAAAAATCAACCTATGACATCACAAGCGAACTTGAGATAGCACGACTTGTTATGGCATGCATCCTAGACCAAGATTCTCTCCTCTGACGTGTTGAAAAAAGGAAAACGAAAAACCCTGCATCGCCATAATTGAGATGGCAGTGATGCCAGTAGAACTTTTTAAGTTTTCACTCGTGTTATAAGGCAACTCCACCTTGTCCCTTCCAATTCTATTGTTTGGCCCTTAAGTTTACAAGGTTCATGCAGCTCAGGGCATTTAAGAATTCAACAAGGTGTTTAGGACTAACTGAAGTCGTCGTCTATGGGGTAAGACAAGAACCAAAATCGTCATTACCAAAGGTCGAAACCCTGCAGTAGCATAGAAAAACCATGTGTTTTTTTCGGTATAACATAAATAAAGAGAGAATGCTTCAAGGGGCTTTCAACAAAAAGAAGTCATTCTAGTGGTCATCCTTGAACGTGACTCTGGTAAACTATTCTCGGAAGTTTTGTCATCAGAAAATGCTCTGTCAAATGCCCTGCCCCTTCAACCAAGGCTTAGAAGTATTCTTCTTCAGATTGGTACCTCAAATGTGCAACAGAAGTCATGGTCCTAGTTTGTTAACTCATTGTAGTTAATGAATCAAATGTTCTCTATTTGATTTTGAGATAACTCAAGCTCTTTCGTTTCGTCCTCTTGATATTTTTTTCTTTAATATATGAGTGTTCGAGCCCACTTACGTGCACATCGACTAATCTCATGGAATAACTCATCTGACTCTACAACATTTGGATGTCAAAGAATATTTATAGGAAATTAATTCCTAGATAGGTGGCCACCATGAATTAAACTCACGAACTCTTAGTTAATTATTTAGACTATGTCTCCCTTTTTATCACTAGGTCAACTCATGATGGTTTTCATTCTCTTGAGATGATCTTCTTCAAGCTTTTCAAAGATTACTTCTTTTATGGTTATGGTCTTTGGCACACTTTTGTTTCCTTTCCCAGCATTTCATTTGGCTTGAATTGTTTCCTTTGTTGTTTTGATTGATTTTTCCCTTTGTTTGGAGCTTGTTAAGTCCTTGAACCTCGTTTTGTTTGTTTTTATTAGAGATTCTAGCTCTTTGTATAATTCTCTTGTATTTTGAGTATTAGTCTCATTTTATAATAATATTAATGAAGAGGCTGGTCTTTCTTATTAAAAAAGATACTTGTAGAATCACAATGTAAATATACTCAAATTTGAAGTGGTACTTCCGGCGGCAATACCCAAAGGTCAGAAGAATGGTTCCCAAATTGGGCACAAAATATGCTGACGTGAAATATACAGCTTTCCCCTGGGCAAGGAGACGTCTAAACATAGGCGTACTGACCATGACATACCCACATAATTATTAAGTTTGACATGTCATATACAAAATGCAGCCAAATAATCCTATTGAGTTAACTATTGAGGCATAAAAGACACTGGAATCCGTCGAAGATAAAAGACGAGATACTTACTTGTCCAACGTCCTGAGGGAATTAAAAACTAATATCAAATTTTTGCAAGTTTCCACGACGGAACCACCCGCCATTTGTTCTTTGGAAACTGAGAGGTCTTCAACAGATTGTTTAGCAGAGAGCAACAGGAAAGCCTGAAGAATGATGGACAAACTCAGTAAACTATTTATGGCCTCTACTAACTAGTGCAAATAGATTACAAGCCAATATGCATAAACATAAAATAAAACAATTGTTTCAAACCGGAAGGTGATAGGCAGAAACTATATCTCTTATATACTTTTTCCCCTTTATTTAGTCATAATGTTAAAATGGAAAACATCTAATGAAAGGGCTATGCTTGTCATCAAGGTTTAGAGTAAATGAAAGCTCACCAAAGAGTAACAACAGCTAAGACGAAAAACCTTTTCATAAAGTACTGATGAAATTTATCTCATCTTACATATAGAAAGCACTGACACGACAAAAAGCTGTCAACATAGTAAATAAGAATTCCATGCATGCTGGAAAGTCGACAAAAACAACCATTAGTAGCATAGCTGTGGGTCCAAGTACCATTGAGTTTATTGTATAAGAGACGGGAAGTGAATCACCTGAAAACCATGTGCTAATAAAAGATGAATTGCATGTGCACCAATCTTCTTAGTAATACTTTTAGTACTAGAGCTGTTCGAAATACACTTCAATACTCCAGAGAACGTTGCATCTTCTGCAGGACCATTAGACCTCCTAGTACGAACAGAAGGCTGCCAGGTGAAAATAAACATAATAGTTGTGTTGTATTGTTTAAAATTGATGTGCCAATGTGTGTGTGTGTTAGATAACGAGTCACAGAACCAGTATGGTCAAAATTATACTCGGTAATTAATGCAAATACTTTTAAGAAATGATTTAGGGAAAGAAAAACCCAAGTAGTAACATTATTAAGTAAATCTGACGGTGTTGAATCACATATATACCTTGGAGATGTATTTCCAGAAAAA

mRNA sequence

ATGAATAGCGTAGCAAACCTGCCATTGTTCGCAGCCAGCGTAAGTACCAAGCGGACCACAGTATTCCGCTTCAGCAACAACAAACTACGCCCCATTAGATCCATGAGAGCTGTTGTCCAGCGAGTCGCCTCTGCAAGCGTCCAGGTCGATGGCCGCACCGTTTCAGAGATCGGCCCAGGTCTCCTCGTGCTCGTCGGCCTTCACGACTCCGACTCCGACACCGACGCTGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTCCCAAATGAGAGTACCGGCAAAGCTTGGGACTTAAACGTGATGCAGAAAAACTACGAGGTTCTATTAGTCAGCCAGTTTACACTGTACGGAATGTTGAAGGGGAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCTAAACCTTTTTACGCTTCTGTGGTCGAGAGGTTCGGTAAATCCTACAACCCAGATGCGATAAAAGATGGAGTGTTTGGAGCAATGATGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATTGACTCCCAACCGTCTAAGAATACAGTTGAGGCTTCAGAAGACTCGTAA

Coding sequence (CDS)

ATGAATAGCGTAGCAAACCTGCCATTGTTCGCAGCCAGCGTAAGTACCAAGCGGACCACAGTATTCCGCTTCAGCAACAACAAACTACGCCCCATTAGATCCATGAGAGCTGTTGTCCAGCGAGTCGCCTCTGCAAGCGTCCAGGTCGATGGCCGCACCGTTTCAGAGATCGGCCCAGGTCTCCTCGTGCTCGTCGGCCTTCACGACTCCGACTCCGACACCGACGCTGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTCCCAAATGAGAGTACCGGCAAAGCTTGGGACTTAAACGTGATGCAGAAAAACTACGAGGTTCTATTAGTCAGCCAGTTTACACTGTACGGAATGTTGAAGGGGAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCTAAACCTTTTTACGCTTCTGTGGTCGAGAGGTTCGGTAAATCCTACAACCCAGATGCGATAAAAGATGGAGTGTTTGGAGCAATGATGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATTGACTCCCAACCGTCTAAGAATACAGTTGAGGCTTCAGAAGACTCGTAA

Protein sequence

MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSKNTVEASEDS*
Homology
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BLAST of CsaV3_1G012640 vs. NCBI nr
Match: KGN64710.1 (hypothetical protein Csa_014221 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 5.2e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60
           MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG
Sbjct: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60

Query: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180

Query: 181 DSQPSKNTVEASEDS 196
           DSQPSKNTVEASEDS
Sbjct: 181 DSQPSKNTVEASEDS 195

[Close]
BLAST of CsaV3_1G012640 vs. NCBI nr
Match: XP_011653368.2 (D-aminoacyl-tRNA deacylase [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 5.2e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60
           MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG
Sbjct: 47  MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 106

Query: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 107 LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 166

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 167 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 226

Query: 181 DSQPSKNTVEASEDS 196
           DSQPSKNTVEASEDS
Sbjct: 227 DSQPSKNTVEASEDS 241

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BLAST of CsaV3_1G012640 vs. NCBI nr
Match: XP_008442903.1 (PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo] >KAA0057021.1 D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 1.2e-100
Identity = 191/196 (97.45%), Postives = 193/196 (98.47%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNN-KLRPIRSMRAVVQRVASASVQVDGRTVSEIGP 60
           MNSVANLPLFAASVSTKRTT+FRFSNN KL PIRSMRAVVQRVASASVQVDGRTVSEIGP
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGP 60

Query: 61  GLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120
           GLLVLVGLH+SDSD DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG
Sbjct: 61  GLLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120

Query: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180
           MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ
Sbjct: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180

Query: 181 IDSQPSKNTVEASEDS 196
           IDSQPSKNTVEASEDS
Sbjct: 181 IDSQPSKNTVEASEDS 196

[Close]
BLAST of CsaV3_1G012640 vs. NCBI nr
Match: XP_038894530.1 (D-aminoacyl-tRNA deacylase [Benincasa hispida])

HSP 1 Score: 359.4 bits (921), Expect = 2.0e-95
Identity = 182/195 (93.33%), Postives = 186/195 (95.38%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60
           MNSVANLPLFAASVSTKRTT+  F NNKL+PIRSMRAVVQRVASASV+VDGRTVSEIGPG
Sbjct: 1   MNSVANLPLFAASVSTKRTTL--FGNNKLQPIRSMRAVVQRVASASVEVDGRTVSEIGPG 60

Query: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLVLVGLHDSDSD DAEYICRKVLNMRLFPNEST +AWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 61  LLVLVGLHDSDSDADAEYICRKVLNMRLFPNESTARAWDLNVMQKNYEVLLVSQFTLYGM 120

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPP RAKPFYASVVERFGKSYNPD IKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 121 LKGNKPDFHVAMPPLRAKPFYASVVERFGKSYNPDLIKDGVFGAMMKVNLVNDGPVTMQI 180

Query: 181 DSQPSKNTVEASEDS 196
           DSQPSKNTVE  EDS
Sbjct: 181 DSQPSKNTVEPPEDS 193

[Close]
BLAST of CsaV3_1G012640 vs. NCBI nr
Match: XP_022140203.1 (D-tyrosyl-tRNA(Tyr) deacylase [Momordica charantia])

HSP 1 Score: 355.9 bits (912), Expect = 2.2e-94
Identity = 180/195 (92.31%), Postives = 184/195 (94.36%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60
           MNSVANLPL+AASV TKRT +   SN K +P RSMRAVVQRV SASVQVDGRTVSEIGPG
Sbjct: 1   MNSVANLPLYAASVGTKRTRL--LSNKKTQPTRSMRAVVQRVVSASVQVDGRTVSEIGPG 60

Query: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLVLVGLH+SDSD DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 61  LLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180

Query: 181 DSQPSKNTVEASEDS 196
           DSQPSKNTVEA EDS
Sbjct: 181 DSQPSKNTVEAQEDS 193

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy Swiss-Prot
Match: Q54EY1 (D-aminoacyl-tRNA deacylase OS=Dictyostelium discoideum OX=44689 GN=dtd PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-43
Identity = 82/149 (55.03%), Postives = 109/149 (73.15%), Query Frame = 0 

Query: 35  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 94
           M+A++QRV S+SV V+G  +SEI  GL+ L+G+   D+  DAEYI RK+LN+RL+ NE  
Sbjct: 1   MKAIIQRVKSSSVTVEGEVISEIKQGLMCLIGIGRDDTKEDAEYITRKILNLRLWKNEDG 60

Query: 95  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 154
            K WD +V Q +YE+L VSQFTL+  LKGNK  +H+AM P+ +K FY   +E   KSY P
Sbjct: 61  TKNWDRSVQQMDYEILFVSQFTLFAQLKGNKQSYHLAMAPELSKQFYLDFLENAKKSYKP 120

Query: 155 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQ 184
           + IKDG FGAMM V L+NDGPVT+Q+DS+
Sbjct: 121 EKIKDGRFGAMMDVQLINDGPVTIQLDSK 149

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy Swiss-Prot
Match: Q9DD18 (D-aminoacyl-tRNA deacylase 1 OS=Mus musculus OX=10090 GN=Dtd1 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 5.0e-41
Identity = 82/148 (55.41%), Postives = 111/148 (75.00%), Query Frame = 0 

Query: 35  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 94
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DS  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDES- 60

Query: 95  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 154
           GK W  +VM K YEVL VSQFTL  +LKGNKPDFH+AMP ++A+ FY S +E+  KSY P
Sbjct: 61  GKHWSKSVMDKEYEVLCVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKSYRP 120

Query: 155 DAIKDGVFGAMMKVNLVNDGPVTMQIDS 183
           + I+DG FGA M+V++ NDGPVT++++S
Sbjct: 121 ELIRDGKFGAYMQVHIQNDGPVTIELES 147

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy Swiss-Prot
Match: Q8TEA8 (D-aminoacyl-tRNA deacylase 1 OS=Homo sapiens OX=9606 GN=DTD1 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-40
Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 0 

Query: 35  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 94
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   D+  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 95  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 154
           GK W  +VM K YE+L VSQFTL  +LKGNKPDFH+AMP ++A+ FY S +E+  K+Y P
Sbjct: 61  GKHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRP 120

Query: 155 DAIKDGVFGAMMKVNLVNDGPVTMQIDS 183
           + IKDG FGA M+V++ NDGPVT++++S
Sbjct: 121 ELIKDGKFGAYMQVHIQNDGPVTIELES 147

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy Swiss-Prot
Match: Q2T9V8 (D-aminoacyl-tRNA deacylase 1 OS=Bos taurus OX=9913 GN=DTD1 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.3e-40
Identity = 79/148 (53.38%), Postives = 110/148 (74.32%), Query Frame = 0 

Query: 35  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 94
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   D+  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 95  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 154
           GK W  +VM K YEVL VSQFTL  +LKGNKPDFH+AMP ++A+ FY   +E+  K+Y P
Sbjct: 61  GKHWSKSVMDKQYEVLCVSQFTLQCVLKGNKPDFHLAMPAEQAESFYKGFLEQLRKAYRP 120

Query: 155 DAIKDGVFGAMMKVNLVNDGPVTMQIDS 183
           + +KDG FGA M+V++ NDGPVT++++S
Sbjct: 121 ELVKDGKFGAYMQVHIQNDGPVTIELES 147

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy Swiss-Prot
Match: F1QGC8 (D-aminoacyl-tRNA deacylase 1 OS=Danio rerio OX=7955 GN=dtd1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.6e-39
Identity = 77/151 (50.99%), Postives = 110/151 (72.85%), Query Frame = 0 

Query: 35  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 94
           M+A++QRV  ASV V    +S IG GL VL+G+   D+  D +Y+ RK+LN+R+F +E+ 
Sbjct: 1   MKAIIQRVTRASVTVGEEQISSIGRGLCVLLGISVEDTQKDVDYMVRKILNLRVFEDEN- 60

Query: 95  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 154
           G+AW  +VM    EVL VSQFTL  +LKGNKPD+H AMP + A+PFY +++E+  ++Y P
Sbjct: 61  GRAWSRSVMDGELEVLCVSQFTLQCLLKGNKPDYHAAMPAELAQPFYNNMLEQLRETYKP 120

Query: 155 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPS 186
           + IKDG FGA M+V + NDGPVT+Q++S P+
Sbjct: 121 ELIKDGQFGAKMQVLIQNDGPVTIQLESPPA 150

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy TrEMBL
Match: A0A0A0LS01 (D-aminoacyl-tRNA deacylase OS=Cucumis sativus OX=3659 GN=Csa_1G076620 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.5e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60
           MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG
Sbjct: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60

Query: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180

Query: 181 DSQPSKNTVEASEDS 196
           DSQPSKNTVEASEDS
Sbjct: 181 DSQPSKNTVEASEDS 195

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy TrEMBL
Match: A0A5A7UU37 (D-aminoacyl-tRNA deacylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002050 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.9e-101
Identity = 191/196 (97.45%), Postives = 193/196 (98.47%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNN-KLRPIRSMRAVVQRVASASVQVDGRTVSEIGP 60
           MNSVANLPLFAASVSTKRTT+FRFSNN KL PIRSMRAVVQRVASASVQVDGRTVSEIGP
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGP 60

Query: 61  GLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120
           GLLVLVGLH+SDSD DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG
Sbjct: 61  GLLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120

Query: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180
           MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ
Sbjct: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180

Query: 181 IDSQPSKNTVEASEDS 196
           IDSQPSKNTVEASEDS
Sbjct: 181 IDSQPSKNTVEASEDS 196

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy TrEMBL
Match: A0A1S3B6T2 (D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103486664 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.9e-101
Identity = 191/196 (97.45%), Postives = 193/196 (98.47%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNN-KLRPIRSMRAVVQRVASASVQVDGRTVSEIGP 60
           MNSVANLPLFAASVSTKRTT+FRFSNN KL PIRSMRAVVQRVASASVQVDGRTVSEIGP
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGP 60

Query: 61  GLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120
           GLLVLVGLH+SDSD DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG
Sbjct: 61  GLLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120

Query: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180
           MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ
Sbjct: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180

Query: 181 IDSQPSKNTVEASEDS 196
           IDSQPSKNTVEASEDS
Sbjct: 181 IDSQPSKNTVEASEDS 196

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy TrEMBL
Match: A0A6J1CHG7 (D-aminoacyl-tRNA deacylase OS=Momordica charantia OX=3673 GN=LOC111010928 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 180/195 (92.31%), Postives = 184/195 (94.36%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60
           MNSVANLPL+AASV TKRT +   SN K +P RSMRAVVQRV SASVQVDGRTVSEIGPG
Sbjct: 1   MNSVANLPLYAASVGTKRTRL--LSNKKTQPTRSMRAVVQRVVSASVQVDGRTVSEIGPG 60

Query: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLVLVGLH+SDSD DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 61  LLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180

Query: 181 DSQPSKNTVEASEDS 196
           DSQPSKNTVEA EDS
Sbjct: 181 DSQPSKNTVEAQEDS 193

[Close]
BLAST of CsaV3_1G012640 vs. ExPASy TrEMBL
Match: A0A6J1EH34 (D-aminoacyl-tRNA deacylase OS=Cucurbita moschata OX=3662 GN=LOC111434135 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92
Identity = 177/195 (90.77%), Postives = 185/195 (94.87%), Query Frame = 0 

Query: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60
           MNSVA LPLFAASV TKRTTVF  +  K++PIRSMRAVVQRVASASV+VDGRTVSEIGPG
Sbjct: 1   MNSVAYLPLFAASVGTKRTTVFS-NKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPG 60

Query: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLVLVGLHDSDS++DAEYICRKVLNMRLFPN+STGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 61  LLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGM 120

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGK Y PDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQI 180

Query: 181 DSQPSKNTVEASEDS 196
           +SQPSKN VEASE S
Sbjct: 181 ESQPSKNMVEASEGS 194

[Close]
BLAST of CsaV3_1G012640 vs. TAIR 10
Match: AT4G18460.1 (D-Tyr-tRNA(Tyr) deacylase family protein )

HSP 1 Score: 260.8 bits (665), Expect = 9.0e-70
Identity = 121/151 (80.13%), Postives = 140/151 (92.72%), Query Frame = 0 

Query: 35  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 94
           MRAV+QRV+S+SV VDGR VSEIGPGLLVL+G+H+SD+++DA+YICRKVLNMRLF NE+T
Sbjct: 1   MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESDADYICRKVLNMRLFSNETT 60

Query: 95  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 154
           GK WD NVMQ+NY VLLVSQFTLYG LKGNKPDFHVAMPP +AKPFYAS+VE+F K+YNP
Sbjct: 61  GKGWDQNVMQRNYGVLLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNP 120

Query: 155 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPS 186
           DA+KDGVFGAMM+VNLVNDGPVTMQ+DS  S
Sbjct: 121 DAVKDGVFGAMMQVNLVNDGPVTMQLDSPQS 151

The following BLAST results are available for this feature:
BLAST of CsaV3_1G012640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64710.15.2e-104100.00hypothetical protein Csa_014221 [Cucumis sativus][more]
XP_011653368.25.2e-104100.00D-aminoacyl-tRNA deacylase [Cucumis sativus][more]
XP_008442903.11.2e-10097.45PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo] >KAA0057021.1 D-tyrosyl-... [more]
XP_038894530.12.0e-9593.33D-aminoacyl-tRNA deacylase [Benincasa hispida][more]
XP_022140203.12.2e-9492.31D-tyrosyl-tRNA(Tyr) deacylase [Momordica charantia][more]
BLAST of CsaV3_1G012640 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q54EY12.4e-4355.03D-aminoacyl-tRNA deacylase OS=Dictyostelium discoideum OX=44689 GN=dtd PE=3 SV=1[more]
Q9DD185.0e-4155.41D-aminoacyl-tRNA deacylase 1 OS=Mus musculus OX=10090 GN=Dtd1 PE=1 SV=2[more]
Q8TEA82.5e-4054.05D-aminoacyl-tRNA deacylase 1 OS=Homo sapiens OX=9606 GN=DTD1 PE=1 SV=2[more]
Q2T9V84.3e-4053.38D-aminoacyl-tRNA deacylase 1 OS=Bos taurus OX=9913 GN=DTD1 PE=2 SV=1[more]
F1QGC83.6e-3950.99D-aminoacyl-tRNA deacylase 1 OS=Danio rerio OX=7955 GN=dtd1 PE=1 SV=1[more]
BLAST of CsaV3_1G012640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS012.5e-104100.00D-aminoacyl-tRNA deacylase OS=Cucumis sativus OX=3659 GN=Csa_1G076620 PE=3 SV=1[more]
A0A5A7UU375.9e-10197.45D-aminoacyl-tRNA deacylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff... [more]
A0A1S3B6T25.9e-10197.45D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103486664 PE=3 SV=1[more]
A0A6J1CHG71.1e-9492.31D-aminoacyl-tRNA deacylase OS=Momordica charantia OX=3673 GN=LOC111010928 PE=3 S... [more]
A0A6J1EH341.0e-9290.77D-aminoacyl-tRNA deacylase OS=Cucurbita moschata OX=3662 GN=LOC111434135 PE=3 SV... [more]
BLAST of CsaV3_1G012640 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G18460.19.0e-7080.13D-Tyr-tRNA(Tyr) deacylase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003732D-aminoacyl-tRNA deacylase DTDPFAMPF02580Tyr_Deacylasecoord: 36..181
e-value: 3.8E-50
score: 170.1
IPR003732D-aminoacyl-tRNA deacylase DTDTIGRFAMTIGR00256TIGR00256coord: 35..182
e-value: 4.6E-43
score: 145.2
IPR003732D-aminoacyl-tRNA deacylase DTDPANTHERPTHR10472D-TYROSYL-TRNA TYR DEACYLASEcoord: 35..191
IPR003732D-aminoacyl-tRNA deacylase DTDHAMAPMF_00518Deacylase_Dtdcoord: 35..182
score: 27.691175
IPR003732D-aminoacyl-tRNA deacylase DTDCDDcd00563Dtyr_deacylasecoord: 35..182
e-value: 1.94712E-75
score: 221.379
IPR023509D-aminoacyl-tRNA deacylase-like superfamilyGENE3D3.50.80.10coord: 35..188
e-value: 1.8E-63
score: 215.3
IPR023509D-aminoacyl-tRNA deacylase-like superfamilySUPERFAMILY69500DTD-likecoord: 34..182
NoneNo IPR availablePANTHERPTHR10472:SF5D-AMINOACYL-TRNA DEACYLASE 1coord: 35..191

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G012640.1CsaV3_1G012640.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0002161 aminoacyl-tRNA editing activity
molecular_function GO:0051499 D-aminoacyl-tRNA deacylase activity