CsaV3_1G012160 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G012160
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptiontrafficking protein particle complex subunit 13
Locationchr1: 7554617 .. 7560735 (+)
RNA-Seq ExpressionCsaV3_1G012160
SyntenyCsaV3_1G012160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACACGGTCAAAACTAATACATTTGCATTTTCTCCTTATTACACTTCAATATCAACTTTTAGTGTAGTTTTGGTAAATATGGTCCTAATGGATACGTTTAAACCCGAAACAAAACAAAAGTTTAGGAGGAAAAAAGAAAGCTTGTGGGTTGAACTCAACTGTCGAGCGATACGATGAGTCGACCAGTGGCTATCGATTAAGAAGGCCGACATGTCGTCCTTTATCGATTCGTTTCATCTCCATTGCTGAGTTCTTGGGGCCATTTTCAGCTACTACCCATTCTTCTTTGAGATTCTTTGTTCAACAGATAACGAGCGAGATGAGCAATGCTCAGGGATCCCACTCCCTGGCCTTCAGGGTGATGAGGCTCTGTAGGCCGTCATTTCAAGTTGATCCTCCTCTCCGTCTCGATCCCGTTGATTTACTCGTCGGTGAGGACATCTTAGACGATCCTGTGGCTGCTAACCAACTCCCTCGTCTCCTTGCACCACAGTTGTCTGACGATTCCGACTCCGATCTCAGCTACAGTTCCAGATTCCTTCTTCATGATTCCTCTGATGCAATGGGTCTCAATGGCCTCCTCGTACTCCCTCAAGCTTTCGGGTTTTTTTTCTTCTCTATTCCTCTACTCCCTCCTTCCAATTGGATGAATTGATCTGTTTGTGTCTTTCGTTTGTTAATTGTTGGCTGTATGTATGGTAATCATCTCCCAGGGCGATTTATTTGGGCGAAACTTTCTGTAGCTATATCAGTGTGAATAATAGCTCCAATTTTGAAGTCAGGGACGTTATAATCAAGGTCGGTTTTCGTTCCCTTTAGGCAGTAAGAAATGTGTTCTGCTGTTAAATTTAGAGCTTTCTGTACAGGCAGAAATTCAAACGGAGAGGCAGAGAATTCTTCTTCTGGATTCATCAAAATCCCCTGTTGAAACTATACGTGCTGGGGGCCGTTACGACTTCATTGTTGAACACGATGTGAAGGAACTCGGAGCTCATACGTAAGCTTGAGATTGAAAGTTGGCTACTATGCCTGCGAAGTGGTTTCTTTGTTGATTGAGTACTTCTAATTGATGCTTCATTTCGTTATTGTAGGCTAGTCTGCACTGCATTGTACAATGATGGTGATGGTGAGCGTAAATATCTTCCACAGTTTTTCAAGTTCATGGTTGCAAATCCACTTTCGGTCAGAACAAAGGTAATATGCTCTTTGGATCTTACAATTATCGACGTACAACTTTTCTTTTCTAGAATTTGTGGCCCTTTTCTTTTCGCCTTTGGTGAATTTTATTGAAAGCTTTCAGTGGCTTCCGTTGCTTAGTTCTGGGTTTATTATCAGATATCTGATATTCTTCGAATTATTTCATCTGCAGGTCCGAGTTGTGAAGGTATGTTTTGCTGACTAAAAGCAGTCGACGTAAGTTTAGAATGTCTCATAAGTATTGAAGTTAGAGTATATTTATTGCTTTTAAATGTCAAAGTAAATCCTTGAATTCAATTGTAGCATATTGTTTTATATCATAGAAGTAATCGTTTTTATCTTGGTATTCTGAAAACTCTCTTCTACACCCACCCTAAAAGAAATGGTAATTTTTGGCCGATATTCGTTTCATTTTAGGGATATATTTTTTTAAAATTTGTTGAAGTTATATGATTTTGTCGAGTAGGGAGGAATTGTTTGCATATAACTTGTATCGTTTATTGATTTTTGTTGACGATTTGTGTTGATGTAGTGAAGTGCTCTCAGCTCCTTCTCATAGTAGTTCTTAGTGCTATGGCTTTGTAGTTTTGCTAGATTCTTGATCTTGATTTTATAAAGCATTAATGGTGGTGATTAATGCTATACTACTGTACTTTCCGATTTCCAGTTTTCCCGTGTTCGAAAATTTCATTAAGAGCTATCATATGATAGTTCTCTTTGTATTTCAGGATAGTACATTTTTAGAAGCTTGCATTGAAAATCATACAAAATCAAATCTATTTATGGACCAAGTTGATTTTGAGCCTTCTCCAAACTGGAATGCGGTGATAATAAACGCTGATGAACATCACTCTGAGCATAAATCTACAACAAGGTATGGACCATATGTCAGTTAGTGATATTAAATAGTTGATTATCGTGCTAATTCATGTCATGAATTTATTGTTCCATGGTTGAGTATTTTGCTATTCATTTTTTCCCTCATATTCAAGCGTATGTTTATTTTTGTGCTGCAGAGAGGTCTTCAAGCCTCCTGTTTTGGTCAGATCAGGTGGAGGAATCCATAATTTTCTTTATCAATTGAAATGTTCAACGAATGGTCCTTCTTCTCCGCTGAAAGTTGAGGGAAGTAATATTCTTGGTAAACTTCAGATAACATGGCGTACAAATATGGGTGAACCTGGACGACTGCAAACACAACAGATTTTGGGTTCTGTGAGTGTCTTAATTCATAGAATAATTTAAAAAGTAATTCAATTATATGGTATTTTTGTTGATGATTTGGTTATTGGTAAGCAACCTCTCACGTGCTGCAGAAGATTTATCTTGGTTTTACCAATTGATTACTGCCAATGGAATGTTAAGTCTAAACTGTGTTTAAATCCTGGTGTCCTCTGTATGTTCTTGAAATGGTTTCCAATTGTGACGTGATTATTTTTCTTTGCAGTTTCTGAAATCTTACTGACGACTGTTTATCACATGATATCAAGAATTTTTATTTCTCTAAAACCTTGCTTTGATCTTCCACGTTTATTACCCTGCGGTTCTAGTCAAATGCCTCATATGAAACCCGATATATGGTTGATAAATGCACGGATGATTGTTTACTGAGTTTTGTTAAAAACCTAAAATCATATTTAAAACATAGTTATGCGTAGGGTTCACTGGTATTTTTTCCTATAAAGAAAGAAAAATATTAAAATTTGTTTACTTAGATAAATTTTGAACTTTTGATGCAAAAAATGGATATTGACATCATCTATTGGTTACATGTTATTATAGTTGGTGTGAATGTTTAATATCGCTTTTTAACTGTTATGGATTAGTACTTTTTACCTTGAGTTAAGAAACTAAAATTTTCCTTTATTCGAGCTTTAAACTTTTGGATTTAATGTATTTAGTATAATATAAACTAATTTAGATTGTGAATCTACAATTAATAATTTTTTTTATGACATCTACTACTCTGGATAAATTATAGCTAGACTAGAGCTAATATGTGTCAAACTGAAACTTCTAAAAGAGATGCATCTATATTAGATAAAAGGTTTAAGATGACCGTTGCTTTAATATTTTGATGAAGTATTGATATGAAATTAAATTTACCATAATCTATTAGTCTAAGCTTTTGGATTACATTTAAGTTGGTATCAAAACTAGTGTAGGATGAGTTCGTGTGTTTGTATGTTCACGGTATTTCATCTCCACCAACTTGTTGGCTTTTGTGCTAATTTCTAAGTCCACACAAGTAAGGAAGAGGGAAAGGGTGTTAAAAAATTAATTATTTTATAACCGATCAACTTAAAAGCCTTGGGTTGATTTGCTGATTTAGTAGCCTATATTTCTCTCATTGGTCGTTTATATTTGTTTTGTAGCCCATTACTCGCAAGGAGCTTGAGTTGAATGTCGTTGAGATGCCAGATGTTATCAGACTGGAGAGGCCTTTTACGGTAACTTTCCTTTTGTTGTTATTTCTTAATGAAAAAGTTCATCTAATAAGTTAGATAAAATCAAATTAATTAGTCATTCTCCAGCAGAGGTTGGATTCCGGGTTAATTCTGCTTCTTAATCTCACCATTTTCCCAGATTTATTTTGGAATTGATTGATTTATTGCTTCTTCAGTTACATATGCGTCTCACAACACAGATTGAGAGGGAATTGGGCCCTTTTGAGGTCTGGATGTCACTTAACAGTTCGGATGAGGATAAGGTTGTTATGGTTAATGGTCTTCAGAAAGTGGTATGTTCACTCGTTCTGTCTTAGTCATGGAATCCTATCTTTCTACTAGAATTCGTCGTGTTTGATAATTCGTATGTTAGAAGCTGGTGTAATTTCTTTTGTTGTGCCCAGATCAATCCATTTGTCACGAGCGCTATCTTTTCCAGTTGAACTTGTGTTTGAAATTTAGGAACTTTCACTCTCTCCAACATTGACCGATTAATTTGTTCCTTAACACTGTGTTATGGTGAGGGATGACATGTTGGAAAGGCAGCCGAAACTAGAATTTCTTTATGCATCCGTTTTGTAAATGTGTTCCTGATTTTTTTACATGAAATTTTCAACAGGTCATACCAAGAGTTGAGCCATATGGTTCCACAGATTTCCACCTGGTATGAATGACAAATTTATATGATGGATTGTGACTCTTGATAGTGATTTCATTTTATTAAATAAAAAAAATTCCTCATTTGTTATGCCATTCTATGCATGTGTATTGTTCAACCATTAAAAACCAGGACGGCTGAGATGGAAACAAACTATAGCCTTTTGAGCTTCTCCATCATGTTGACACTTTCTTTTTATAGAACACGCTGAAACTATTTTGACTTCTGCCTTTGTTCAACCAGAACCTCATTGCCACTAAACCCGGAGTGCAGAGAATCGCAGGCATTAAAGTCTTTGACACTAGGGAGAAGAAAGCCTATGAGCACCCTTCGCCAGATCTAGAGGTTTAAAATTATCTCATTTATTTGAAAACATCATTTTCATTGCCTTGCACGTGAACGAATTTAAGATCTTGTCTGAGCACGTTTGCAGTTTCTATGTTAGGTGTCACAGGTTCATGATGAGAGATACCTATTATTGATAAAATGCACTGAATGAACTGGTGTAGATGCCAATAGGAAACATTGATGCTAAACGACGTGTCGGTGTTTGGACGTGTTAAAACACGTTATTTGGAGTGTTCTTTTTATTTCATTAACTTTGTACATGCAGAGGGAACACGTAGAATAAGTGCACTGTTAAGACACCCAGGAACCTATTGTGAGAATAAAATAAGAAGGAAACCAAAGAGTGATGGGTTTTTCTTTTCAGCTCTAGGTTTACTGTAGGCCCTGCTCTTGTTTTAATGTTCTTGGGAAATTACTTGTCACCACATCTTTGCTTCTTAGATTGGACCTCTAAGATCGTTTACATAATTTGGTGTTTGTGGCAGTACTATAATTTACACAATTTAATCAAAATTGTAAAGTTAGGAAAGAAGAGAAGTATGCTATTAGATATTGCTGAGCTTTCAATGCAATAGGGTGCTTAGGTGGGATGGGGGGTTCTGTTTTGTGAGCCTAATTCATTTCCTAATTGGATTGACAAACGCTATTTGAATTATAAACTCTCACTGCCAAATTCACAAAATCCACTTTTGGCTGCAGATTTATGTCGATTTGGAATGAACGCCTCGGCTCGACTCGACTGACCTGGTCTTCTCAAGAGTTCACTTCCCGCATTGTTTAGGACACAGAAGTAAACATCCCATGATCTACATTTCCTGAAATTCAATTAAACTCATGGAATCAACCATCGATCAAGCCCAACACTCATTCACAAGCTTATGCTCGATAGAAATACTCTCATTAGATGCCTATATCTACTCCGTTCTCATTCTTTGGTAAATTACTGCAAAGATGGTTTTTCCAAAAGATGCAAATAGGTAGTAATGCTGATCCTTCCTTGGTTTTGTTTCTTCAAATGGGAAGGAGGAACAATAGAAAGGATAATGATGGTAACAATGTGTTGTTATAGTGTAGTCACAAGAAAAAAAATGGCCTTTCTTTCGCTAAAAGAAAAAAGGGTCAGAAATGGCCTTTCTTTCATTATAAAAGGATAAGTCAGAAATGACTTTTCTTTGTTGTGAAGGGACGGATATACTTCACATATCCGTACCATGCCGTACGAAATAGATGTATATTTTTGGGTTCCTAGAAAAGTCCTAATCTGACTTAATTGAGCACATGGATTTGTTTGGAATCATTGATGAATAGACAATTGGCCAATAGGACTTAATTTCGTGGCATAGCTGTGATTGTTGCTTTGCTATCGTCTCATTCATTAAATGATTGTCGTGTAATTTTATTCTAATCAGAATCTCCCTCAAAACATTTCATTTTTTATTTTTAGTAACTGTTTAATTCTTGTTTTTGT

mRNA sequence

ATGAGCAATGCTCAGGGATCCCACTCCCTGGCCTTCAGGGTGATGAGGCTCTGTAGGCCGTCATTTCAAGTTGATCCTCCTCTCCGTCTCGATCCCGTTGATTTACTCGTCGGTGAGGACATCTTAGACGATCCTGTGGCTGCTAACCAACTCCCTCGTCTCCTTGCACCACAGTTGTCTGACGATTCCGACTCCGATCTCAGCTACAGTTCCAGATTCCTTCTTCATGATTCCTCTGATGCAATGGGTCTCAATGGCCTCCTCGTACTCCCTCAAGCTTTCGGGGCGATTTATTTGGGCGAAACTTTCTGTAGCTATATCAGTGTGAATAATAGCTCCAATTTTGAAGTCAGGGACGTTATAATCAAGGCAGAAATTCAAACGGAGAGGCAGAGAATTCTTCTTCTGGATTCATCAAAATCCCCTGTTGAAACTATACGTGCTGGGGGCCGTTACGACTTCATTGTTGAACACGATGTGAAGGAACTCGGAGCTCATACGCTAGTCTGCACTGCATTGTACAATGATGGTGATGGTGAGCGTAAATATCTTCCACAGTTTTTCAAGTTCATGGTTGCAAATCCACTTTCGGTCAGAACAAAGGTCCGAGTTGTGAAGGATAGTACATTTTTAGAAGCTTGCATTGAAAATCATACAAAATCAAATCTATTTATGGACCAAGTTGATTTTGAGCCTTCTCCAAACTGGAATGCGGTGATAATAAACGCTGATGAACATCACTCTGAGCATAAATCTACAACAAGAGAGGTCTTCAAGCCTCCTGTTTTGGTCAGATCAGGTGGAGGAATCCATAATTTTCTTTATCAATTGAAATGTTCAACGAATGGTCCTTCTTCTCCGCTGAAAGTTGAGGGAAGTAATATTCTTGGTAAACTTCAGATAACATGGCGTACAAATATGGGTGAACCTGGACGACTGCAAACACAACAGATTTTGGGTTCTCCCATTACTCGCAAGGAGCTTGAGTTGAATGTCGTTGAGATGCCAGATGTTATCAGACTGGAGAGGCCTTTTACGTTACATATGCGTCTCACAACACAGATTGAGAGGGAATTGGGCCCTTTTGAGGTCTGGATGTCACTTAACAGTTCGGATGAGGATAAGGTTGTTATGGTTAATGGTCTTCAGAAAGTGGTCATACCAAGAGTTGAGCCATATGGTTCCACAGATTTCCACCTGAACCTCATTGCCACTAAACCCGGAGTGCAGAGAATCGCAGGCATTAAAGTCTTTGACACTAGGGAGAAGAAAGCCTATGAGCACCCTTCGCCAGATCTAGAGATTTATGTCGATTTGGAATGA

Coding sequence (CDS)

ATGAGCAATGCTCAGGGATCCCACTCCCTGGCCTTCAGGGTGATGAGGCTCTGTAGGCCGTCATTTCAAGTTGATCCTCCTCTCCGTCTCGATCCCGTTGATTTACTCGTCGGTGAGGACATCTTAGACGATCCTGTGGCTGCTAACCAACTCCCTCGTCTCCTTGCACCACAGTTGTCTGACGATTCCGACTCCGATCTCAGCTACAGTTCCAGATTCCTTCTTCATGATTCCTCTGATGCAATGGGTCTCAATGGCCTCCTCGTACTCCCTCAAGCTTTCGGGGCGATTTATTTGGGCGAAACTTTCTGTAGCTATATCAGTGTGAATAATAGCTCCAATTTTGAAGTCAGGGACGTTATAATCAAGGCAGAAATTCAAACGGAGAGGCAGAGAATTCTTCTTCTGGATTCATCAAAATCCCCTGTTGAAACTATACGTGCTGGGGGCCGTTACGACTTCATTGTTGAACACGATGTGAAGGAACTCGGAGCTCATACGCTAGTCTGCACTGCATTGTACAATGATGGTGATGGTGAGCGTAAATATCTTCCACAGTTTTTCAAGTTCATGGTTGCAAATCCACTTTCGGTCAGAACAAAGGTCCGAGTTGTGAAGGATAGTACATTTTTAGAAGCTTGCATTGAAAATCATACAAAATCAAATCTATTTATGGACCAAGTTGATTTTGAGCCTTCTCCAAACTGGAATGCGGTGATAATAAACGCTGATGAACATCACTCTGAGCATAAATCTACAACAAGAGAGGTCTTCAAGCCTCCTGTTTTGGTCAGATCAGGTGGAGGAATCCATAATTTTCTTTATCAATTGAAATGTTCAACGAATGGTCCTTCTTCTCCGCTGAAAGTTGAGGGAAGTAATATTCTTGGTAAACTTCAGATAACATGGCGTACAAATATGGGTGAACCTGGACGACTGCAAACACAACAGATTTTGGGTTCTCCCATTACTCGCAAGGAGCTTGAGTTGAATGTCGTTGAGATGCCAGATGTTATCAGACTGGAGAGGCCTTTTACGTTACATATGCGTCTCACAACACAGATTGAGAGGGAATTGGGCCCTTTTGAGGTCTGGATGTCACTTAACAGTTCGGATGAGGATAAGGTTGTTATGGTTAATGGTCTTCAGAAAGTGGTCATACCAAGAGTTGAGCCATATGGTTCCACAGATTTCCACCTGAACCTCATTGCCACTAAACCCGGAGTGCAGAGAATCGCAGGCATTAAAGTCTTTGACACTAGGGAGAAGAAAGCCTATGAGCACCCTTCGCCAGATCTAGAGATTTATGTCGATTTGGAATGA

Protein sequence

MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLSDDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVIINADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELGPFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDTREKKAYEHPSPDLEIYVDLE*
Homology
[Close]
BLAST of CsaV3_1G012160 vs. NCBI nr
Match: XP_004146594.1 (trafficking protein particle complex subunit 13 [Cucumis sativus] >KGN64666.1 hypothetical protein Csa_014155 [Cucumis sativus])

HSP 1 Score: 887.9 bits (2293), Expect = 3.6e-254
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS
Sbjct: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLEIYVDLE 441
           REKKAYEHPSPDLEIYVDLE
Sbjct: 421 REKKAYEHPSPDLEIYVDLE 440

[Close]
BLAST of CsaV3_1G012160 vs. NCBI nr
Match: XP_008442355.1 (PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Cucumis melo])

HSP 1 Score: 857.1 bits (2213), Expect = 6.9e-245
Identity = 423/440 (96.14%), Postives = 431/440 (97.95%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           MS+ QGSHSLAFRVMRLCRPSFQVDPPLR+DPVDLLVGEDILDDPVAANQLPRLLA Q S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DDSDSDLSYSSRFLLHDSSDAMGL GLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVK+STFLEACIENHTK+NLFMDQVDFEPSPNWNAVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKESTFLEACIENHTKANLFMDQVDFEPSPNWNAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCST+GPSSPLKVEGSNILGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTHGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWM  N SDE+KVVMVNGLQ VVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMLPNGSDEEKVVMVNGLQTVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLEIYVDLE 441
           +EKKAY+HP PDLEIYVDLE
Sbjct: 421 KEKKAYDHPLPDLEIYVDLE 440

[Close]
BLAST of CsaV3_1G012160 vs. NCBI nr
Match: TYK26403.1 (trafficking protein particle complex subunit 13 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 846.7 bits (2186), Expect = 9.3e-242
Identity = 417/435 (95.86%), Postives = 426/435 (97.93%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           MS+ QGSHSLAFRVMRLCRPSFQVDPPLR+DPVDLLVGEDILDDPVAANQLPRLLA Q S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DDSDSDLSYSSRFLLHDSSDAMGL GLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVK+STFLEACIENHTK+NLFMDQVDFEPSPNWNAVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKESTFLEACIENHTKANLFMDQVDFEPSPNWNAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCST+GPSSPLKVEGSNILGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTHGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWM  N SDE+KVVMVNGLQ VVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMLPNGSDEEKVVMVNGLQTVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLEI 436
           +EKKAY+HP PDLE+
Sbjct: 421 KEKKAYDHPLPDLEV 435

[Close]
BLAST of CsaV3_1G012160 vs. NCBI nr
Match: XP_016899911.1 (PREDICTED: trafficking protein particle complex subunit 13 isoform X2 [Cucumis melo])

HSP 1 Score: 845.5 bits (2183), Expect = 2.1e-241
Identity = 417/434 (96.08%), Postives = 425/434 (97.93%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           MS+ QGSHSLAFRVMRLCRPSFQVDPPLR+DPVDLLVGEDILDDPVAANQLPRLLA Q S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DDSDSDLSYSSRFLLHDSSDAMGL GLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVK+STFLEACIENHTK+NLFMDQVDFEPSPNWNAVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKESTFLEACIENHTKANLFMDQVDFEPSPNWNAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCST+GPSSPLKVEGSNILGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTHGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWM  N SDE+KVVMVNGLQ VVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMLPNGSDEEKVVMVNGLQTVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLE 435
           +EKKAY+HP PDLE
Sbjct: 421 KEKKAYDHPLPDLE 434

[Close]
BLAST of CsaV3_1G012160 vs. NCBI nr
Match: XP_038894571.1 (trafficking protein particle complex subunit 13 isoform X2 [Benincasa hispida])

HSP 1 Score: 839.0 bits (2166), Expect = 1.9e-239
Identity = 419/440 (95.23%), Postives = 427/440 (97.05%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           MS AQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDL+ GEDILDDPVAA QLPRLL  QLS
Sbjct: 1   MSGAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLVAGEDILDDPVAAYQLPRLLEAQLS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DDSDSDLSYSSRF+LHDSSDAMGL GLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFVLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNW+AVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWSAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSE KSTTREVFKPPVLVRSGGGIHNFLYQLK ST+GP SPLKVEGSNILGKLQ
Sbjct: 241 INADEHHSEPKSTTREVFKPPVLVRSGGGIHNFLYQLKFSTHGP-SPLKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           ITWRTNMGEPGRLQTQQILGSPITRKELEL+VVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELHVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWMSLN SDE+KVVMVNGLQ +VIPRVEPYGSTDFHLNLIA KPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMSLNGSDEEKVVMVNGLQTMVIPRVEPYGSTDFHLNLIAIKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLEIYVDLE 441
           REKKAY+HP PDLEIYVDLE
Sbjct: 421 REKKAYDHPLPDLEIYVDLE 439

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy Swiss-Prot
Match: A5PLN9 (Trafficking protein particle complex subunit 13 OS=Homo sapiens OX=9606 GN=TRAPPC13 PE=1 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 9.5e-56
Identity = 142/430 (33.02%), Postives = 223/430 (51.86%), Query Frame = 0 

Query: 8   HSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLSDDSDSDL 67
           H LA +VMRL +P+   + P+  +  D                LP  L  QL  D  S +
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKD----------------LPGDLFNQLMRDDPSTV 69

Query: 68  SYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKAEIQ 127
                    + ++ + L  +L LPQ FG I+LGETF SYISV+N SN  V+D+++KA++Q
Sbjct: 70  ---------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 129

Query: 128 TERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQF 187
           T  QR L L +S + V  ++     D ++ H+VKE+G H LVC   Y    GE+ Y  +F
Sbjct: 130 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKF 189

Query: 188 FKFMVANPLSVRTK-------VRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 247
           FKF V  PL V+TK       +  V D  FLEA I+N T S +FM++V  EPS  +N   
Sbjct: 190 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMYNVTE 249

Query: 248 INADEHHSEHKST--TREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGK 307
           +N+     E  ST  +R   +P            +LY LK           ++G  ++GK
Sbjct: 250 LNSVSQAGECVSTFGSRAYLQPM-------DTRQYLYCLKPKNEFAEKAGIIKGVTVIGK 309

Query: 308 LQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERE 367
           L I W+TN+GE GRLQT Q+        ++ L++  +PD + LE PF +  ++T   ER 
Sbjct: 310 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERT 369

Query: 368 LGPFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVF 427
           +   ++ + + +++      ++G Q   + ++ P  S    L L+++  G+Q I+G+++ 
Sbjct: 370 M---DLVLEMCNTNSIHWCGISGRQ---LGKLHPSSSLCLALTLLSSVQGLQSISGLRLT 400

Query: 428 DTREKKAYEH 429
           DT  K+ YE+
Sbjct: 430 DTFLKRTYEY 400

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy Swiss-Prot
Match: Q5RCG0 (Trafficking protein particle complex subunit 13 OS=Pongo abelii OX=9601 GN=TRAPPC13 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.5e-56
Identity = 142/430 (33.02%), Postives = 223/430 (51.86%), Query Frame = 0 

Query: 8   HSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLSDDSDSDL 67
           H LA +VMRL +P+   + P+  +  D                LP  L  QL  D  S +
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEERD----------------LPGDLFNQLMRDDPSTV 69

Query: 68  SYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKAEIQ 127
                    + ++ + L  +L LPQ FG I+LGETF SYISV+N SN  V+D+++KA++Q
Sbjct: 70  ---------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 129

Query: 128 TERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQF 187
           T  QR L L +S + V  ++     D ++ H+VKE+G H LVC   Y    GE+ Y  +F
Sbjct: 130 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKF 189

Query: 188 FKFMVANPLSVRTK-------VRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 247
           FKF V  PL V+TK       +  V D  FLEA I+N T S +FM++V  EPS  +N   
Sbjct: 190 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMYNVTE 249

Query: 248 INADEHHSEHKST--TREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGK 307
           +N+     E  ST  +R   +P            +LY LK           ++G  ++GK
Sbjct: 250 LNSVSQAGESVSTFGSRAYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 309

Query: 308 LQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERE 367
           L I W+TN+GE GRLQT Q+        ++ L++  +PD + LE PF +  ++T   ER 
Sbjct: 310 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERT 369

Query: 368 LGPFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVF 427
           +   ++ + + +++      ++G Q   + ++ P  S    L L+++  G+Q I+G+++ 
Sbjct: 370 M---DLVLEMCNTNSIHWCGISGRQ---LGKLHPSSSLCLALTLLSSVQGLQSISGLRLT 400

Query: 428 DTREKKAYEH 429
           DT  K+ YE+
Sbjct: 430 DTFLKRTYEY 400

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy Swiss-Prot
Match: Q6PBY7 (Trafficking protein particle complex subunit 13 OS=Danio rerio OX=7955 GN=trappc13 PE=2 SV=2)

HSP 1 Score: 217.6 bits (553), Expect = 2.8e-55
Identity = 141/431 (32.71%), Postives = 223/431 (51.74%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           ++ A+  H LA +VMRL +P+   + P+  +  D                LP  L  +L 
Sbjct: 3   VNQAKQEHLLALKVMRLTKPTLFTNMPVTCEDRD----------------LPGDLFLRLM 62

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
            D  S +           ++ + L  +L LPQ FG I+LGETF SYISV+N S+  V+D+
Sbjct: 63  KDDPSTVK---------GAETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDI 122

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           ++KA++QT  QR L L +S S V  ++     D ++ H+VKE+G H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGE 182

Query: 181 RKYLPQFFKFMVANPLSVRTK-VRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAV 240
           + Y  +FFKF V  PL V+TK      D  FLEA I+N T S +FM++V  EPS  +N  
Sbjct: 183 KLYFRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSMMYNVT 242

Query: 241 IIN--ADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILG 300
            +N  A    S   +  +  +  P+  R       +LY LK           ++G  ++G
Sbjct: 243 ELNNVASGDESSESTFGKMSYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIG 302

Query: 301 KLQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIER 360
           KL I W+TN+GE GRLQT Q+        ++ L++  +PD + LE PF +  ++T   ER
Sbjct: 303 KLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEFIPDTVDLEEPFDITCKITNCSER 362

Query: 361 ELGPFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKV 420
            +   ++ + + ++       V+G Q   + ++ P  S    L L+++  G+Q I+G+++
Sbjct: 363 TM---DLLLEMCNTRSVHWCGVSGRQ---LGKLSPSASLSIPLKLLSSVQGLQSISGLRL 395

Query: 421 FDTREKKAYEH 429
            DT  K+ YE+
Sbjct: 423 TDTFLKRTYEY 395

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy Swiss-Prot
Match: A7MB76 (Trafficking protein particle complex subunit 13 OS=Bos taurus OX=9913 GN=TRAPPC13 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.6e-55
Identity = 140/430 (32.56%), Postives = 223/430 (51.86%), Query Frame = 0 

Query: 8   HSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLSDDSDSDL 67
           H LA +VMRL +P+   + P+  +  D                LP  L  QL  D  S +
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKD----------------LPGDLFNQLMRDDPSTV 69

Query: 68  SYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKAEIQ 127
                    + ++ + L  +L LPQ FG I+LGETF SYISV+N SN  V+D+++KA++Q
Sbjct: 70  ---------NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 129

Query: 128 TERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQF 187
           T  QR L L +S + V  ++     D ++ H+VKE+G H LVC   Y    GE+ Y  +F
Sbjct: 130 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQSGEKMYFRKF 189

Query: 188 FKFMVANPLSVRTK-------VRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 247
           FKF V  PL V+TK       +  V D  FLEA I+N T S +FM++V  EPS  +N   
Sbjct: 190 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVAE 249

Query: 248 INADEHHSEHKST--TREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGK 307
           +N+     E  +T  +R   +P            +LY LK           ++G  ++GK
Sbjct: 250 LNSVNQAGECVTTFGSRAYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 309

Query: 308 LQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERE 367
           L I W+TN+GE GRLQT Q+        ++ L++  +PD + LE PF +  ++T   ER 
Sbjct: 310 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERT 369

Query: 368 LGPFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVF 427
           +   ++ + + +++      ++G Q   + ++ P  S    L L+++  G+Q ++G+++ 
Sbjct: 370 M---DLVLEMCNTNSIHWCGISGRQ---LGKLHPSSSLCLALTLLSSVQGLQSVSGLRLT 400

Query: 428 DTREKKAYEH 429
           DT  K+ YE+
Sbjct: 430 DTFLKRTYEY 400

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy Swiss-Prot
Match: Q3TIR1 (Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.7e-55
Identity = 141/430 (32.79%), Postives = 223/430 (51.86%), Query Frame = 0 

Query: 8   HSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLSDDSDSDL 67
           H LA +VMRL +P+   + P+  +  D                LP  L  QL  D  S +
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKD----------------LPGDLFNQLMKDDPSTV 69

Query: 68  SYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKAEIQ 127
                    + ++ + L  +L LPQ FG I+LGETF SYISV+N SN  V+D+++KA++Q
Sbjct: 70  ---------NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 129

Query: 128 TERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQF 187
           T  QR L L +S + V  ++     D ++ H+VKE+G H LVC   Y    GE+ Y  +F
Sbjct: 130 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKF 189

Query: 188 FKFMVANPLSVRTK-------VRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 247
           FKF V  PL V+TK       +  V D  FLEA I+N T S +FM++V  EPS  +N   
Sbjct: 190 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTE 249

Query: 248 INADEHHSEHKST--TREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGK 307
           +N+     E  ST  +R   +P            +LY LK           ++G  ++GK
Sbjct: 250 LNSVTQAGECISTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 309

Query: 308 LQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERE 367
           L I W+TN+GE GRLQT Q+        ++ L++  +PD + LE PF +  ++T   ER 
Sbjct: 310 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERM 369

Query: 368 LGPFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVF 427
           +   ++ + + +++      ++G Q   + ++ P  S    L L+++  G+Q ++G+++ 
Sbjct: 370 M---DLVLEMCNTNSIHWCGISGRQ---LGKLHPSSSLCLALTLLSSVQGLQSVSGLRLT 400

Query: 428 DTREKKAYEH 429
           DT  K+ YE+
Sbjct: 430 DTFLKRTYEY 400

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy TrEMBL
Match: A0A0A0LXD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073730 PE=3 SV=1)

HSP 1 Score: 887.9 bits (2293), Expect = 1.8e-254
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS
Sbjct: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLEIYVDLE 441
           REKKAYEHPSPDLEIYVDLE
Sbjct: 421 REKKAYEHPSPDLEIYVDLE 440

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy TrEMBL
Match: A0A1S3B514 (trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486246 PE=3 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 3.3e-245
Identity = 423/440 (96.14%), Postives = 431/440 (97.95%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           MS+ QGSHSLAFRVMRLCRPSFQVDPPLR+DPVDLLVGEDILDDPVAANQLPRLLA Q S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DDSDSDLSYSSRFLLHDSSDAMGL GLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVK+STFLEACIENHTK+NLFMDQVDFEPSPNWNAVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKESTFLEACIENHTKANLFMDQVDFEPSPNWNAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCST+GPSSPLKVEGSNILGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTHGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWM  N SDE+KVVMVNGLQ VVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMLPNGSDEEKVVMVNGLQTVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLEIYVDLE 441
           +EKKAY+HP PDLEIYVDLE
Sbjct: 421 KEKKAYDHPLPDLEIYVDLE 440

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy TrEMBL
Match: A0A5D3DS43 (Trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00660 PE=3 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.5e-242
Identity = 417/435 (95.86%), Postives = 426/435 (97.93%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           MS+ QGSHSLAFRVMRLCRPSFQVDPPLR+DPVDLLVGEDILDDPVAANQLPRLLA Q S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DDSDSDLSYSSRFLLHDSSDAMGL GLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVK+STFLEACIENHTK+NLFMDQVDFEPSPNWNAVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKESTFLEACIENHTKANLFMDQVDFEPSPNWNAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCST+GPSSPLKVEGSNILGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTHGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWM  N SDE+KVVMVNGLQ VVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMLPNGSDEEKVVMVNGLQTVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLEI 436
           +EKKAY+HP PDLE+
Sbjct: 421 KEKKAYDHPLPDLEV 435

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy TrEMBL
Match: A0A1S4DV98 (trafficking protein particle complex subunit 13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486246 PE=3 SV=1)

HSP 1 Score: 845.5 bits (2183), Expect = 1.0e-241
Identity = 417/434 (96.08%), Postives = 425/434 (97.93%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           MS+ QGSHSLAFRVMRLCRPSFQVDPPLR+DPVDLLVGEDILDDPVAANQLPRLLA Q S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DDSDSDLSYSSRFLLHDSSDAMGL GLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVK+STFLEACIENHTK+NLFMDQVDFEPSPNWNAVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKESTFLEACIENHTKANLFMDQVDFEPSPNWNAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCST+GPSSPLKVEGSNILGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTHGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWM  N SDE+KVVMVNGLQ VVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMLPNGSDEEKVVMVNGLQTVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLE 435
           +EKKAY+HP PDLE
Sbjct: 421 KEKKAYDHPLPDLE 434

[Close]
BLAST of CsaV3_1G012160 vs. ExPASy TrEMBL
Match: A0A6J1EI59 (trafficking protein particle complex subunit 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434384 PE=3 SV=1)

HSP 1 Score: 815.5 bits (2105), Expect = 1.1e-232
Identity = 406/440 (92.27%), Postives = 421/440 (95.68%), Query Frame = 0 

Query: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60
           M+ AQGSHSLAFRVMRLCRPSFQVD PLRLDPVDL+ GEDI DDPVAA QLPRLL  QLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           D+SDSD SYSSRFLLHDSSDAMGL GLLVLPQAFGAIYLGETFCSYISVNNSS+FEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELG+HTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240
           RKYLPQFFKFMVANPLSVRTKVRVVK+STFLEACIENHTKSNL MDQVDFEPSPNWNAVI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKESTFLEACIENHTKSNLLMDQVDFEPSPNWNAVI 240

Query: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300
           INADEHHSE KSTTREVFKPP+LVRSGGGIHNFLYQLK ST+G SSP KVEGSNILGKLQ
Sbjct: 241 INADEHHSELKSTTREVFKPPILVRSGGGIHNFLYQLKFSTHG-SSPRKVEGSNILGKLQ 300

Query: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360
           +TWRTNMGEPGRLQTQQILGSPI RKELEL+VVEMPDVIRLERPFTLHMRLTTQIERELG
Sbjct: 301 LTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420
           PFEVWMS N SDE+KVVMVNGLQ +VIPRVEP+GSTDFHLNLIATKPGVQRIAGIKVFDT
Sbjct: 361 PFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 REKKAYEHPSPDLEIYVDLE 441
           REKK+Y+HP PDLEIYVDLE
Sbjct: 421 REKKSYDHPLPDLEIYVDLE 439

[Close]
BLAST of CsaV3_1G012160 vs. TAIR 10
Match: AT2G47960.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 (InterPro:IPR010378); Has 285 Blast hits to 284 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). )

HSP 1 Score: 588.2 bits (1515), Expect = 5.5e-168
Identity = 293/441 (66.44%), Postives = 358/441 (81.18%), Query Frame = 0 

Query: 2   SNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLSD 61
           +   G HSLAFRVMRLC+PSF VDPPLR+DP DLL GED  DDP +A+   R ++   +D
Sbjct: 6   TQTHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSS--AD 65

Query: 62  DSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVI 121
             DSDLSY +RFLL+  +D +GL+GLL+LPQ+FGAIYLGETFCSYISVNNSS  EVRDV 
Sbjct: 66  AVDSDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVT 125

Query: 122 IKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGER 181
           IKAEIQTERQRILLLD+SKSPVE+IR GGRYDFIVEHDVKELGAHTLVC+ALYND DGER
Sbjct: 126 IKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGER 185

Query: 182 KYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVII 241
           KYLPQFFKF+VANPLSVRTKVRVVK++TFLEACIENHTK+NLFMDQVDFEP+  W+AV +
Sbjct: 186 KYLPQFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSAVRL 245

Query: 242 NADEHHSEHKST--TREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKL 301
             ++   +  ++  +  + KPPV++RSGGGIHN+LY+L  S +  S   K +GSNILGK 
Sbjct: 246 QNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNPSAD-VSGQTKFQGSNILGKF 305

Query: 302 QITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIEREL 361
           QITWRTN+GEPGRLQTQQILG+P++RKE+ + VVE+P VI L RPF  ++ LT Q +R+L
Sbjct: 306 QITWRTNLGEPGRLQTQQILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLTNQTDRQL 365

Query: 362 GPFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFD 421
           GPFEV +S + +  +K V +NGLQ +++PR+E +GS DF LNLIA+K GVQ+IAGI   D
Sbjct: 366 GPFEVSLSQDETQLEKPVGINGLQTLMLPRIEAFGSNDFQLNLIASKLGVQKIAGITALD 425

Query: 422 TREKKAYEHPSPDLEIYVDLE 441
           TREKK YE   PD+EI+V+ +
Sbjct: 426 TREKKTYE-LVPDMEIFVETD 442

The following BLAST results are available for this feature:
BLAST of CsaV3_1G012160 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146594.13.6e-254100.00trafficking protein particle complex subunit 13 [Cucumis sativus] >KGN64666.1 hy... [more]
XP_008442355.16.9e-24596.14PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Cucumis m... [more]
TYK26403.19.3e-24295.86trafficking protein particle complex subunit 13 isoform X1 [Cucumis melo var. ma... [more]
XP_016899911.12.1e-24196.08PREDICTED: trafficking protein particle complex subunit 13 isoform X2 [Cucumis m... [more]
XP_038894571.11.9e-23995.23trafficking protein particle complex subunit 13 isoform X2 [Benincasa hispida][more]
BLAST of CsaV3_1G012160 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A5PLN99.5e-5633.02Trafficking protein particle complex subunit 13 OS=Homo sapiens OX=9606 GN=TRAPP... [more]
Q5RCG09.5e-5633.02Trafficking protein particle complex subunit 13 OS=Pongo abelii OX=9601 GN=TRAPP... [more]
Q6PBY72.8e-5532.71Trafficking protein particle complex subunit 13 OS=Danio rerio OX=7955 GN=trappc... [more]
A7MB763.6e-5532.56Trafficking protein particle complex subunit 13 OS=Bos taurus OX=9913 GN=TRAPPC1... [more]
Q3TIR14.7e-5532.79Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trap... [more]
BLAST of CsaV3_1G012160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXD61.8e-254100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073730 PE=3 SV=1[more]
A0A1S3B5143.3e-24596.14trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo OX=36... [more]
A0A5D3DS434.5e-24295.86Trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo var. ... [more]
A0A1S4DV981.0e-24196.08trafficking protein particle complex subunit 13 isoform X2 OS=Cucumis melo OX=36... [more]
A0A6J1EI591.1e-23292.27trafficking protein particle complex subunit 13-like isoform X1 OS=Cucurbita mos... [more]
BLAST of CsaV3_1G012160 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G47960.15.5e-16866.44unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010378Trafficking protein particle complex subunit 13PFAMPF06159DUF974coord: 88..318
e-value: 9.8E-67
score: 225.3
IPR010378Trafficking protein particle complex subunit 13PANTHERPTHR13134UNCHARACTERIZEDcoord: 1..436
NoneNo IPR availablePANTHERPTHR13134:SF4TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 13-RELATEDcoord: 1..436

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G012160.1CsaV3_1G012160.1mRNA