CsaV3_1G011980 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G011980
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	TIR domain-containing protein
Location	chr1: 7444699 .. 7445419 (-)
RNA-Seq Expression	CsaV3_1G011980
Synteny	CsaV3_1G011980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACGATATTTTTCAACTGTGGCCAAAAGCTACCTAACTTCATCCAAAATCCTCAGTCGTCGTAACAATATCCGATCCATATCACGCCAATGTGATGTCTTCATAAACCACCGTGGTGCAGACACGAAACGTAACATCGCAGGATTGCTTCATGACCATTTTTCTAGAATAGGTCTTCACTCATTTTTAGATAGTAAGAGCATGAAACCGGGGGATAAATTGTTTGGTGAGATTGAAGAAGGTATTCGGAGTTGTAAGGTTGGGATCGCGGTGTTCTCGCCGCGGTATTGTGAGTCATATTTTTGTTTGCACGAACTTGCCCTAATGATGGAGAACAAAAAGAAAATTATTCCAATTTTCGTTGACGTTCGACCGTCTCAACTTCGTGTTGAATACAACTATAGCTGTCCCAAGAAAGAGTTGCAAAGGTTCAATTGGGCACTTGGGGAAGCCAAATACACTGTTGGACTCACTTTCGACACTGTTAACGGGTAAATTTACTGTCTAACTTTTTTCAATCAAGTGACTGTAGCATAATGCTTTCAATCCTTTTAAATTTAAAAAATGCTTTTATACAAATTGTGGTATTCAAAATCACTCATATATGTTGTGTTGTTATTTTTGTAGGGATTGGTCGGAGCTGTTGAGGAAAGCTTCAAACGCCGTGATTGATAATCTTATCGTCGGTGGAGGGGCCGGAGAGATGCCGGATAATTAG

mRNA sequence

ATGCAACGATATTTTTCAACTGTGGCCAAAAGCTACCTAACTTCATCCAAAATCCTCAGTCGTCGTAACAATATCCGATCCATATCACGCCAATGTGATGTCTTCATAAACCACCGTGGTGCAGACACGAAACGTAACATCGCAGGATTGCTTCATGACCATTTTTCTAGAATAGGTCTTCACTCATTTTTAGATAGTAAGAGCATGAAACCGGGGGATAAATTGTTTGGTGAGATTGAAGAAGGTATTCGGAGTTGTAAGGTTGGGATCGCGGTGTTCTCGCCGCGGTATTGTGAGTCATATTTTTGTTTGCACGAACTTGCCCTAATGATGGAGAACAAAAAGAAAATTATTCCAATTTTCGTTGACGTTCGACCGTCTCAACTTCGTGTTGAATACAACTATAGCTGTCCCAAGAAAGAGTTGCAAAGGTTCAATTGGGCACTTGGGGAAGCCAAATACACTGTTGGACTCACTTTCGACACTGTTAACGGGGATTGGTCGGAGCTGTTGAGGAAAGCTTCAAACGCCGTGATTGATAATCTTATCGTCGGTGGAGGGGCCGGAGAGATGCCGGATAATTAG

Coding sequence (CDS)

ATGCAACGATATTTTTCAACTGTGGCCAAAAGCTACCTAACTTCATCCAAAATCCTCAGTCGTCGTAACAATATCCGATCCATATCACGCCAATGTGATGTCTTCATAAACCACCGTGGTGCAGACACGAAACGTAACATCGCAGGATTGCTTCATGACCATTTTTCTAGAATAGGTCTTCACTCATTTTTAGATAGTAAGAGCATGAAACCGGGGGATAAATTGTTTGGTGAGATTGAAGAAGGTATTCGGAGTTGTAAGGTTGGGATCGCGGTGTTCTCGCCGCGGTATTGTGAGTCATATTTTTGTTTGCACGAACTTGCCCTAATGATGGAGAACAAAAAGAAAATTATTCCAATTTTCGTTGACGTTCGACCGTCTCAACTTCGTGTTGAATACAACTATAGCTGTCCCAAGAAAGAGTTGCAAAGGTTCAATTGGGCACTTGGGGAAGCCAAATACACTGTTGGACTCACTTTCGACACTGTTAACGGGGATTGGTCGGAGCTGTTGAGGAAAGCTTCAAACGCCGTGATTGATAATCTTATCGTCGGTGGAGGGGCCGGAGAGATGCCGGATAATTAG

Protein sequence

MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPIFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVIDNLIVGGGAGEMPDN*

Homology

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BLAST of CsaV3_1G011980 vs. NCBI nr
Match: XP_004146639.1 (TIR domain-containing protein [Cucumis sativus] >KGN64647.1 hypothetical protein Csa_013499 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 1.7e-107
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60
           MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL
Sbjct: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60

Query: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120
           HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI
Sbjct: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120

Query: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180
           FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID
Sbjct: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180

Query: 181 NLIVGGGAGEMPDN 195
           NLIVGGGAGEMPDN
Sbjct: 181 NLIVGGGAGEMPDN 194

[Close]

BLAST of CsaV3_1G011980 vs. NCBI nr
Match: XP_008446613.1 (PREDICTED: disease resistance-like protein CSA1 [Cucumis melo] >KAA0056960.1 disease resistance-like protein CSA1 [Cucumis melo var. makuwa] >TYK26387.1 disease resistance-like protein CSA1 [Cucumis melo var. makuwa])

HSP 1 Score: 379.0 bits (972), Expect = 2.4e-101
Identity = 185/195 (94.87%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLT-SSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIG 60
           MQRYFSTVAK+YLT SSKILSRRN+IRS+SRQCDVFINHRG DTKRNIAGLLHDHFSRIG
Sbjct: 1   MQRYFSTVAKNYLTSSSKILSRRNDIRSLSRQCDVFINHRGVDTKRNIAGLLHDHFSRIG 60

Query: 61  LHSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIP 120
           L  FLDSKSMKPGDKLFGEIEEGIRSCKVG+AVFSPRYCESYFCLHELALM+ENKKKIIP
Sbjct: 61  LRPFLDSKSMKPGDKLFGEIEEGIRSCKVGLAVFSPRYCESYFCLHELALMVENKKKIIP 120

Query: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180
           IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI
Sbjct: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180

Query: 181 DNLIVGGGAGEMPDN 195
           DNLIVG GAGEMPDN
Sbjct: 181 DNLIVGEGAGEMPDN 195

[Close]

BLAST of CsaV3_1G011980 vs. NCBI nr
Match: XP_038893500.1 (TIR-only protein-like [Benincasa hispida])

HSP 1 Score: 362.1 bits (928), Expect = 3.1e-96
Identity = 174/194 (89.69%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60
           MQRYFSTVAK+YLTS KILSRRN+IRSISRQCDVFINHRG DTKRNIAGLL+DHF+RIGL
Sbjct: 1   MQRYFSTVAKNYLTSCKILSRRNDIRSISRQCDVFINHRGVDTKRNIAGLLYDHFTRIGL 60

Query: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120
           H FLDSK+MKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALM+ENKKKIIPI
Sbjct: 61  HPFLDSKNMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMVENKKKIIPI 120

Query: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180
           FVDVRPSQLRVEY+++CP KELQRFNWALGEAKYTVGLTFD++NGDWSELLRKASNAV+D
Sbjct: 121 FVDVRPSQLRVEYSHNCPDKELQRFNWALGEAKYTVGLTFDSINGDWSELLRKASNAVVD 180

Query: 181 NLIVGGGAGEMPDN 195
           NLI GGG  +MPDN
Sbjct: 181 NLIDGGGR-KMPDN 193

[Close]

BLAST of CsaV3_1G011980 vs. NCBI nr
Match: KAG7019631.1 (TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 150/194 (77.32%), Postives = 177/194 (91.24%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60
           MQRYFS++ +++L  S IL+RRN++RS+S++CDVFIN+RG DT+ +IAGLL+DHF+RIGL
Sbjct: 1   MQRYFSSLPRNHLVPSTILTRRNHVRSMSQRCDVFINYRGVDTRPSIAGLLYDHFTRIGL 60

Query: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120
             FLDS +MKPGDKLFGEIEE IRSCKVGIAVFSPRYC+SYFCLHELALM+ENKKKIIPI
Sbjct: 61  RPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCQSYFCLHELALMVENKKKIIPI 120

Query: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180
           FVDVRPS+LRVE+N +CP+KE++RFNWALGEAKYTVGLTFD++NGDWSELLRKAS AVID
Sbjct: 121 FVDVRPSELRVEFNRNCPEKEMERFNWALGEAKYTVGLTFDSINGDWSELLRKASTAVID 180

Query: 181 NLIVGGGAGEMPDN 195
           NL V G A EMP N
Sbjct: 181 NL-VAGEAVEMPGN 193

[Close]

BLAST of CsaV3_1G011980 vs. NCBI nr
Match: KAG6584009.1 (TIR-only protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.9 bits (803), Expect = 9.6e-82
Identity = 148/194 (76.29%), Postives = 176/194 (90.72%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60
           MQRYFS++ +++L  S IL+RRN++ S+S++CDVFIN+RG DT+ +IAGLL+DHF+RIGL
Sbjct: 1   MQRYFSSLPRNHLVPSTILTRRNHVGSMSQRCDVFINYRGVDTRPSIAGLLYDHFTRIGL 60

Query: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120
             FLDS +MKPGDKLFGEIEE IRSCKVGIAVFSPRYC+SYFCLHELALM+ENKKKIIPI
Sbjct: 61  RPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCQSYFCLHELALMVENKKKIIPI 120

Query: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180
           FVDVRPS+LRVE+N +CP+KE++RFNWALGEAKYTVGLTFD++NGDWSELLRKAS AV+D
Sbjct: 121 FVDVRPSELRVEFNRNCPEKEMERFNWALGEAKYTVGLTFDSINGDWSELLRKASTAVVD 180

Query: 181 NLIVGGGAGEMPDN 195
           NL V G A EMP N
Sbjct: 181 NL-VAGEAVEMPGN 193

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy Swiss-Prot
Match: I1GTC2 (TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.6e-39
Identity = 75/154 (48.70%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 33  DVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAV 92
           +VFINHRG DTKR +A LL+D  ++ GL  FLD+ SM+PGD+L   I   IR C V +A+
Sbjct: 54  EVFINHRGVDTKRTVARLLYDRLAQAGLRGFLDNMSMRPGDRLEERIGSAIRECTVAVAI 113

Query: 93  FSPRYCESYFCLHELALMMENKKKIIPIFVDVRPSQLRVEYNYSCPK----KELQRFNWA 152
           FSP YC+S +CL ELA+++E++K IIPIF D++PS L +    +  +    ++L+RF +A
Sbjct: 114 FSPSYCDSEYCLRELAMLVESRKAIIPIFYDIKPSDLLLPQAVADSEVYLPRDLERFKFA 173

Query: 153 LGEAKYTVGLTFDTVNGDWSELLRKASNAVIDNL 183
           L EAK+TVG+T+D+  GD +EL+  A++AV+ N+
Sbjct: 174 LREAKHTVGITYDSATGDMAELVSAAADAVMYNM 207

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.7e-15
Identity = 49/168 (29.17%), Postives = 82/168 (48.81%), Query Frame = 0


Query: 30  RQCDVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKVG 89
           R  DVF++ RG DT++   G L +     G+H+F+D K +K G  +  E+ + I   +  
Sbjct: 10  RSYDVFLSFRGEDTRKTFVGHLFNALIEKGIHTFMDDKELKRGKSISSELMKAIGESRFA 69

Query: 90  IAVFSPRYCESYFCLHELALMMENKKK----IIPIFVDVRPSQLR------------VEY 149
           + VFS  Y  S +CL EL  ++E  +K    ++P+F DV PS +R             E 
Sbjct: 70  VVVFSKNYASSTWCLEELVKILEIHEKFELIVVPVFYDVDPSTVRKQNGEYAVCFTKFEA 129

Query: 150 NYSCPKKELQRFNWALGEAKYTVGLTF-DTVNGDWSELLRKASNAVID 181
           N    + ++ R+  AL +     G    +T NGD S+ +++    + D
Sbjct: 130 NLVDDRDKVLRWREALTKVANISGHDLRNTYNGDESKCIQQILKDIFD 177

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy Swiss-Prot
Match: F4KIF3 (Disease resistance-like protein CSA1 OS=Arabidopsis thaliana OX=3702 GN=CSA1 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.2e-11
Identity = 46/145 (31.72%), Postives = 72/145 (49.66%), Query Frame = 0


Query: 31  QCDVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKVGI 90
           Q  VFIN RG + ++N    L     R G+++F+D+   + G +L   + E I   ++ +
Sbjct: 16  QDQVFINFRGVELRKNFVSHLEKGLKRKGINAFIDTDE-EMGQEL-SVLLERIEGSRIAL 75

Query: 91  AVFSPRYCESYFCLHELALMMENKKK----IIPIFVDVRPSQLRV----------EYNYS 150
           A+FSPRY ES +CL ELA M E  ++    +IPIF  V+P  ++           E   S
Sbjct: 76  AIFSPRYTESKWCLKELAKMKERTEQKELVVIPIFYKVQPVTVKELKGDFGDKFRELVKS 135

Query: 151 CPKKELQRFNWALGEAKYTVGLTFD 162
             KK  + +  AL    +  G+  D
Sbjct: 136 TDKKTKKEWKEALQYVPFLTGIVLD 158

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy Swiss-Prot
Match: Q9SZ66 (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-10
Identity = 49/153 (32.03%), Postives = 77/153 (50.33%), Query Frame = 0


Query: 29  SRQCDVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKV 88
           S + DVF++ RG DT+ N  G L       G+ SF+D + ++ GD L   + + I   K+
Sbjct: 8   SAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDR-LRRGDNLTA-LFDRIEKSKI 67

Query: 89  GIAVFSPRYCESYFCLHELALMME----NKKKIIPIFVDVRPSQLRVEYN-YSCPKKELQ 148
            I VFS  Y  S +CL EL  ++E    N++ ++PIF  V  S +  + N ++ P K   
Sbjct: 68  AIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPFK--- 127

Query: 149 RFNWALGEAKYTVGLTFDTVNGDWSELLRKASN 177
                L E  +  G+T + ++  W   L  ASN
Sbjct: 128 -----LPELTFP-GVTPEEIS-SWKAALASASN 148

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy Swiss-Prot
Match: Q9SSN3 (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-10
Identity = 33/102 (32.35%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 33  DVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAV 92
           DVF++ RG DT+ N    L+    R  + +F D K ++ G +   E++  I   +  + V
Sbjct: 10  DVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAVVV 69

Query: 93  FSPRYCESYFCLHELALMMENKKK----IIPIFVDVRPSQLR 131
            S  Y  S +CL EL  +M+ +KK    ++PIF  V P+ +R
Sbjct: 70  VSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVR 111

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy TrEMBL
Match: A0A0A0LV24 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073070 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 8.4e-108
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60
           MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL
Sbjct: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60

Query: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120
           HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI
Sbjct: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120

Query: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180
           FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID
Sbjct: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180

Query: 181 NLIVGGGAGEMPDN 195
           NLIVGGGAGEMPDN
Sbjct: 181 NLIVGGGAGEMPDN 194

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy TrEMBL
Match: A0A5D3DRR9 (Disease resistance-like protein CSA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00490 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 185/195 (94.87%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLT-SSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIG 60
           MQRYFSTVAK+YLT SSKILSRRN+IRS+SRQCDVFINHRG DTKRNIAGLLHDHFSRIG
Sbjct: 1   MQRYFSTVAKNYLTSSSKILSRRNDIRSLSRQCDVFINHRGVDTKRNIAGLLHDHFSRIG 60

Query: 61  LHSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIP 120
           L  FLDSKSMKPGDKLFGEIEEGIRSCKVG+AVFSPRYCESYFCLHELALM+ENKKKIIP
Sbjct: 61  LRPFLDSKSMKPGDKLFGEIEEGIRSCKVGLAVFSPRYCESYFCLHELALMVENKKKIIP 120

Query: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180
           IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI
Sbjct: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180

Query: 181 DNLIVGGGAGEMPDN 195
           DNLIVG GAGEMPDN
Sbjct: 181 DNLIVGEGAGEMPDN 195

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy TrEMBL
Match: A0A1S3BG53 (disease resistance-like protein CSA1 OS=Cucumis melo OX=3656 GN=LOC103489293 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 185/195 (94.87%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLT-SSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIG 60
           MQRYFSTVAK+YLT SSKILSRRN+IRS+SRQCDVFINHRG DTKRNIAGLLHDHFSRIG
Sbjct: 1   MQRYFSTVAKNYLTSSSKILSRRNDIRSLSRQCDVFINHRGVDTKRNIAGLLHDHFSRIG 60

Query: 61  LHSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIP 120
           L  FLDSKSMKPGDKLFGEIEEGIRSCKVG+AVFSPRYCESYFCLHELALM+ENKKKIIP
Sbjct: 61  LRPFLDSKSMKPGDKLFGEIEEGIRSCKVGLAVFSPRYCESYFCLHELALMVENKKKIIP 120

Query: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180
           IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI
Sbjct: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180

Query: 181 DNLIVGGGAGEMPDN 195
           DNLIVG GAGEMPDN
Sbjct: 181 DNLIVGEGAGEMPDN 195

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy TrEMBL
Match: A0A6J1GSF2 (vesicle-associated protein 1-4-like OS=Cucurbita moschata OX=3662 GN=LOC111456704 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.8e-76
Identity = 142/194 (73.20%), Postives = 166/194 (85.57%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60
           MQR FS V +     S+IL+  ++ RSISR C+VFINHRG DTK+N+AGLL DH +RIGL
Sbjct: 9   MQRSFSAVVR-----SRILNHPSDFRSISRGCNVFINHRGIDTKKNVAGLLFDHLTRIGL 68

Query: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120
             FLDSK+M+PGDKLF EIEEGIRS K+GIAVFSPRYCESY+CLHELA+M+ENKKKIIPI
Sbjct: 69  RPFLDSKNMRPGDKLFNEIEEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPI 128

Query: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180
           FVD+RPS+L V+Y++SCP+ ELQRFNWALGEAKYTVGLTFD++NGDWS+LLRKASNAVID
Sbjct: 129 FVDIRPSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVID 188

Query: 181 NLIVGGGAGEMPDN 195
           NLI   G   M DN
Sbjct: 189 NLIASEGV-LMSDN 196

[Close]

BLAST of CsaV3_1G011980 vs. ExPASy TrEMBL
Match: A0A6J1K0B8 (vesicle-associated protein 1-4-like OS=Cucurbita maxima OX=3661 GN=LOC111489938 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.5e-76
Identity = 139/187 (74.33%), Postives = 163/187 (87.17%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60
           +QR FS V +     S+ILS  ++ RSISR CDVFINHRG DTK+N+AGLL DH +RIGL
Sbjct: 9   LQRSFSPVVR-----SRILSHPSDFRSISRDCDVFINHRGIDTKKNVAGLLFDHLTRIGL 68

Query: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120
             FLDSK+M+PGDKLF EI+EGIR  K+GIAVFSPRYCESY+CLHELA+M+ENKKKIIPI
Sbjct: 69  RPFLDSKNMRPGDKLFDEIKEGIRISKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPI 128

Query: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180
           FVD+RPS+L V+Y++SCP+ ELQRFNWALGEAKYTVGLTFD++NGDWS+LLRKASNAVID
Sbjct: 129 FVDIRPSELHVKYSHSCPETELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVID 188

Query: 181 NLIVGGG 188
           NLI G G
Sbjct: 189 NLIAGEG 190

[Close]

BLAST of CsaV3_1G011980 vs. TAIR 10
Match: AT1G61105.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-55
Identity = 107/183 (58.47%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60
           MQR  +  +K   T+  I    N        CD+FINHRG DTK+ I+GLL+D F+R  L
Sbjct: 1   MQRLLTPCSKIAYTTRYI---ANPTLPYPNPCDIFINHRGIDTKKTISGLLYDCFTRQRL 60

Query: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120
            +FLDSKS+KPGD+LF EI+  I++C VGIAVFSPRYC+SYFCLHELAL+++NKK++IPI
Sbjct: 61  TAFLDSKSLKPGDRLFVEIDMAIKACGVGIAVFSPRYCDSYFCLHELALLVKNKKRVIPI 120

Query: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180
           F DV+PS+L V+ + + P  E++RF  AL EAKYTVGLTFDT NGDWSE L  AS+AV  
Sbjct: 121 FCDVKPSELCVKDDKTRPAAEIRRFQLALEEAKYTVGLTFDTSNGDWSEFLAMASDAVTK 180

Query: 181 NLI 184
           NL+
Sbjct: 181 NLL 180

[Close]

BLAST of CsaV3_1G011980 vs. TAIR 10
Match: AT1G52900.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47
Identity = 88/152 (57.89%), Postives = 113/152 (74.34%), Query Frame = 0


Query: 33  DVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAV 92
           DVFINHRG+DTKRNIA LL+D+     L  FLDSK+MKPGDKLF  I   I + KV + V
Sbjct: 39  DVFINHRGSDTKRNIATLLYDNLKSRNLRPFLDSKNMKPGDKLFDHINNAILTSKVAVTV 98

Query: 93  FSPRYCESYFCLHELALMMENKKKIIPIFVDVRPSQLRVEY-NYSCPKKELQRFNWALGE 152
           FSP YC+SYFCLHELAL+ME++K++IPIF D++PSQL V     +C   E+QRF WAL E
Sbjct: 99  FSPNYCDSYFCLHELALIMESRKRVIPIFCDIKPSQLDVMIERVTCSDDEIQRFRWALQE 158

Query: 153 AKYTVGLTFDTVNGDWSELLRKASNAVIDNLI 184
           AK  VGLTFD+  G+ SE++  AS+ +++ L+
Sbjct: 159 AKDIVGLTFDSYKGNLSEVVTVASDVIVERLV 190

[Close]

BLAST of CsaV3_1G011980 vs. TAIR 10
Match: AT4G09430.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 79.3 bits (194), Expect = 3.7e-15
Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 0


Query: 30  RQCDVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKVG 89
           ++ DVF++ RGADT+ NI   LH     +G+ +F D K ++ GD +  ++   I++    
Sbjct: 13  KEYDVFLSFRGADTRNNIVSYLHKALVDVGIRTFKDDKELEEGDIISEKLVNAIQTSWFA 72

Query: 90  IAVFSPRYCESYFCLHELALMMENKKK----IIPIFVDVRPSQLRVEYN--------YSC 149
           + V S +Y  S +CL EL  +ME   +    ++PIF  V PS +R + N        Y  
Sbjct: 73  VVVLSEKYVTSSWCLEELRHIMELSIQDDIIVVPIFYKVEPSDVRYQKNSFEVKLQHYRD 132

Query: 150 PKKELQRFNWALGEAKYTVGLTFDTVNGD---WSELLRKASN 177
           P+K L ++  AL +     G  F T + +    +E++ K SN
Sbjct: 133 PEKIL-KWKGALTQVGNMSGKHFQTCSDEATNIAEIVSKISN 173

[Close]

BLAST of CsaV3_1G011980 vs. TAIR 10
Match: AT1G72860.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 76.6 bits (187), Expect = 2.4e-14
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 33  DVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAV 92
           DVF++ RG DT++NI   LH      G+ +F D K ++ GD +  EI   I++    + +
Sbjct: 13  DVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEISRAIQNSTYALVI 72

Query: 93  FSPRYCESYFCLHELALMME----NKKKIIPIFVDVRPSQLR 131
            S  Y  S +CL EL ++M+    NK K++PIF  V PS +R
Sbjct: 73  LSENYASSSWCLDELRMVMDLHLKNKIKVVPIFYGVDPSHVR 114

[Close]

BLAST of CsaV3_1G011980 vs. TAIR 10
Match: AT1G17615.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12
Identity = 31/102 (30.39%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 33  DVFINHRGADTKRNIAGLLHDHFSRIGLHSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAV 92
           DVF++ RG DT+R     L+     +G+ +F D   ++ G ++  ++   I + K+ + +
Sbjct: 16  DVFLSFRGKDTRRTFISFLYKELIEMGIRTFKDDVELQSGRRIASDLLAAIENSKIAVVI 75

Query: 93  FSPRYCESYFCLHELALMMENKKK----IIPIFVDVRPSQLR 131
            S  Y  S +CL EL ++M+ +KK    ++PIF +V P+ +R
Sbjct: 76  ISKNYSASPWCLQELVMIMDVEKKGSIIVMPIFYNVEPAHVR 117

The following BLAST results are available for this feature:

BLAST of CsaV3_1G011980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146639.1	1.7e-107	100.00	TIR domain-containing protein [Cucumis sativus] >KGN64647.1 hypothetical protein...	[more]
XP_008446613.1	2.4e-101	94.87	PREDICTED: disease resistance-like protein CSA1 [Cucumis melo] >KAA0056960.1 dis...	[more]
XP_038893500.1	3.1e-96	89.69	TIR-only protein-like [Benincasa hispida]	[more]
KAG7019631.1	1.1e-82	77.32	TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6584009.1	9.6e-82	76.29	TIR-only protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsaV3_1G011980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I1GTC2	3.6e-39	48.70	TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=...	[more]
A0A290U7C4	4.7e-15	29.17	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
F4KIF3	3.2e-11	31.72	Disease resistance-like protein CSA1 OS=Arabidopsis thaliana OX=3702 GN=CSA1 PE=...	[more]
Q9SZ66	1.6e-10	32.03	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=...	[more]
Q9SSN3	2.7e-10	32.35	Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR ...	[more]

BLAST of CsaV3_1G011980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV24	8.4e-108	100.00	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073070 PE=4 SV...	[more]
A0A5D3DRR9	1.2e-101	94.87	Disease resistance-like protein CSA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BG53	1.2e-101	94.87	disease resistance-like protein CSA1 OS=Cucumis melo OX=3656 GN=LOC103489293 PE=...	[more]
A0A6J1GSF2	3.8e-76	73.20	vesicle-associated protein 1-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145670...	[more]
A0A6J1K0B8	8.5e-76	74.33	vesicle-associated protein 1-4-like OS=Cucurbita maxima OX=3661 GN=LOC111489938 ...	[more]

BLAST of CsaV3_1G011980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61105.1	1.3e-55	58.47	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G52900.1	1.3e-47	57.89	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT4G09430.1	3.7e-15	30.86	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G72860.1	2.4e-14	37.25	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G17615.1	1.7e-12	30.39	Disease resistance protein (TIR-NBS class)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 31..177 e-value: 2.4E-22 score: 90.2
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF13676	TIR_2	coord: 34..126 e-value: 1.4E-16 score: 61.1
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 30..174 score: 21.775198
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 5..146 e-value: 3.3E-32 score: 113.2
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 23..149
None	No IPR available	PANTHER	PTHR31008	COP1-INTERACTING PROTEIN-RELATED	coord: 22..183
None	No IPR available	PANTHER	PTHR31008:SF19	TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN	coord: 22..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G011980.1	CsaV3_1G011980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity