CsaV3_1G011120 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G011120
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 6881580 .. 6881732 (+)
RNA-Seq ExpressionCsaV3_1G011120
SyntenyCsaV3_1G011120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTAGAGCAGGGGAAAGCAAATCCTCGAATGTGATTATTATAGCAATCGTGGTTCCAATAACTGCTTCCATTCTGCTTTTGGTTTTGTGCTTGAGTGTCCTTCTCTGGAGAGCAAACAGGAAATACATGATTCTTGTTAAGCAAGAGAGTG

mRNA sequence

AGCAGGGGAAAGCAAATCCTCGAATGTGATTATTATAGCAATCGTGGTTCCAATAACTGCTTCCATTCTGCTTTTGGTTTTGTGCTTGAGTGTCCTTCTCTGGAGAGCAAACAGGAAATACATGATTCTTGTTA

Coding sequence (CDS)

AGCAGGGGAAAGCAAATCCTCGAATGTGATTATTATAGCAATCGTGGTTCCAATAACTGCTTCCATTCTGCTTTTGGTTTTGTGCTTGAGTGTCCTTCTCTGGAGAGCAAACAGGAAATACATGATTCTTGTTA

Protein sequence

SRGKQILECDYYSNRGSNNCFHSAFGFVLECPSLESKQEIHDSCX
Homology
[Close]
BLAST of CsaV3_1G011120 vs. NCBI nr
Match: KAE8652676.1 (hypothetical protein Csa_023781, partial [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 5.0e-18
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  SRGKQILECDYYSNRGSNNCFHSAFGFVLECPSLESKQEIHDSC 45
          SRGKQILECDYYSNRGSNNCFHSAFGFVLECPSLESKQEIHDSC
Sbjct: 1  SRGKQILECDYYSNRGSNNCFHSAFGFVLECPSLESKQEIHDSC 44

[Close]
BLAST of CsaV3_1G011120 vs. NCBI nr
Match: KGN64565.2 (hypothetical protein Csa_013959 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 7.5e-14
Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0 

Query: 4   KQILECDYYSNRGSNNCFHSAFGFVLECPSLESKQEIHDSC 45
           KQILECD YS+R SNNCFHSAFGFVLECPSLESKQEIHDSC
Sbjct: 269 KQILECDDYSHRASNNCFHSAFGFVLECPSLESKQEIHDSC 309

The following BLAST results are available for this feature:
BLAST of CsaV3_1G011120 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652676.15.0e-18100.00hypothetical protein Csa_023781, partial [Cucumis sativus][more]
KGN64565.27.5e-1492.68hypothetical protein Csa_013959 [Cucumis sativus][more]
BLAST of CsaV3_1G011120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G011120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G011120 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G011120.1CsaV3_1G011120.1mRNA