CsaV3_1G010900 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCAATTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCACTCGTCAAGAAGGAAATAGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGACCTGAAATGGCTTCGTCTGGCTGTAGAAGTTCACCACCCACCTTCTGGCAATCTTTAATGTCATGGCGAAGGAAGACGAAGCTAACCAGCAATCGCTTTGTTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGAATGAATAAGATTTCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACATGTAGATGCAGATGGATGTTTCATAATCCTCAGAATATGTATCATGAGGTCAGGATCTGCAAGAGAAGCTAAAAGGCAGCTTTTCTTAAATTTGAGTTGTTCAATGTTGCTGGTGCTTTATATGGTTTGTGTTTCCAAATTCTATGAAGGAACTTCCTAGGATTTCCAAGCCACAGAGAAAGGGAACCAATTAGCTGTTTCAAGTTTCAATCATCAAGGTACAATCCAGTTTAGGAGAAAATATTCAATTGTATGGAAGAACTGTGGCTCTTCAGATGTTTCTCCTTGCAGGTCCATGAGACAGAGAAGAGAGAGGAAAAGAATTAGTGCAGAGATGTAATATAGTTGTGAAAAATATAAGAAATTCTTCAATTTTGTGATCTTCATTACACTTTCCTGCCTCCCCCATACACCTCAGATTCAAGAATGAGCAAACACAATTGTAACTGGCACTACAAACAACCCAGGATCTCACATATATTTACGTTAGTTTAAAAAAAACTACCTAGTGGCACTTTATTGTATTTTGAAACATTCTCTCTAAAAATATTAGTTCTCTTGGACACATGGTTCACCAAGTATATTTGTTTTCGTAGCAAATCAAAAAATTGAAGACATGCAGAAGAAACATAAGCATTTTATCAGGCAATTACTTGCTATCCAAATTCACCATCGCACAGAGGGAATATTTTGAATTATAACAAGAAAGATATGATTAAATCTGAAGACGCATAAAATCCAATGTTAAGTTTCATCTTTATTGACATACAAAATTGCTCAAAACAATCTAGCTTCCATCAATACAGCAATTACTAACCTAACAGGAAGGTCAACGACAACATTTCAAGCACATTATCACCCTTCTTGAAGCAGGTCAGAGCCTACCAATAG ATGGCTGCAATTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCACTCGTCAAGAAGGAAATAGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGACCTGAAATGGCTTCGTCTGGCTGTAGAAGTTCACCACCCACCTTCTGGCAATCTTTAATGTCATGGCGAAGGAAGACGAAGCTAACCAGCAATCGCTTTGTTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGAATGAATAAGATTTCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACATGAAGGTCAACGACAACATTTCAAGCACATTATCACCCTTCTTGAAGCAGGTCAGAGCCTACCAATAG ATGGCTGCAATTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCACTCGTCAAGAAGGAAATAGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGACCTGAAATGGCTTCGTCTGGCTGTAGAAGTTCACCACCCACCTTCTGGCAATCTTTAATGTCATGGCGAAGGAAGACGAAGCTAACCAGCAATCGCTTTGTTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGAATGAATAAGATTTCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACATGAAGGTCAACGACAACATTTCAAGCACATTATCACCCTTCTTGAAGCAGGTCAGAGCCTACCAATAG MAAIAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQSLMSWRRKTKLTSNRFVTKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHMKVNDNISSTLSPFLKQVRAYQ* Homology
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: KGN64543.2 (hypothetical protein Csa_013063 [Cucumis sativus]) HSP 1 Score: 258.8 bits (660), Expect = 2.5e-65 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: XP_011648422.1 (uncharacterized protein LOC105434455 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 6.4e-53 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: XP_016898893.1 (PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo]) HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50 Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: KAA0056869.1 (hypothetical protein E6C27_scaffold96G00380 [Cucumis melo var. makuwa] >TYJ99372.1 hypothetical protein E5676_scaffold248G005900 [Cucumis melo var. makuwa]) HSP 1 Score: 182.6 bits (462), Expect = 2.3e-42 Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: KAG7019678.1 (hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.2 bits (409), Expect = 3.2e-36 Identity = 86/131 (65.65%), Postives = 102/131 (77.86%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. ExPASy TrEMBL
Match: A0A0A0LX43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063600 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.1e-53 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. ExPASy TrEMBL
Match: A0A1S4DSE9 (uncharacterized protein LOC103485409 OS=Cucumis melo OX=3656 GN=LOC103485409 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51 Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. ExPASy TrEMBL
Match: A0A5A7UTL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005900 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42 Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. ExPASy TrEMBL
Match: A0A6J1CHB1 (uncharacterized protein LOC111010862 OS=Momordica charantia OX=3673 GN=LOC111010862 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 6.0e-33 Identity = 80/112 (71.43%), Postives = 89/112 (79.46%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. ExPASy TrEMBL
Match: A0A2N9IT24 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55316 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.9e-20 Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. TAIR 10
Match: AT4G21780.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-09 Identity = 42/109 (38.53%), Postives = 55/109 (50.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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