CsaV3_1G010810 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTTCTTCAAGACAGATTCTTACGAGACTTTTAGGTATATATGTATTCTTTCTTTTTAAATATATTTTATTGGCCACCTAATTTTCTACCTGCGCCACGTAAGACCCCGTCGCGTCCACCGTGGCTCTTTCTCCGACGCGGTCTCTTTCCGTCCTTTCCCTTCCCCTTCCCCTTCCTTCTCTCTCTATTTAAACAAAAAATTTCCCCTAATTCCTAAATCCCAAAATCGAAATCATTTCGTAAACTCTCAAAAGAAGAAAAAGCAAGAAAGAAATCACAGTAATGGGCAACTGTTGCCGAAGCCAATCCTCTACGATGGTCTTCGCCGGTGATGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCAGAAACGTTTCCGCTGCAACCTCCGGCGGCGATCCAGAGAAACATAGATTACTTGGAGAGAAGGAAGCGGGGTCGTGTTCGCAGCCGCTAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTCTGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAATCGAGCATCATCGATCATGGAGGCCTTCTCTTCAAAGCATTCCAGAGGATTACTGA ATGACCTTCTTCAAGACAGATTCTTACGAGACTTTTAGCCAATCCTCTACGATGGTCTTCGCCGGTGATGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCAGAAACGTTTCCGCTGCAACCTCCGGCGGCGATCCAGAGAAACATAGATTACTTGGAGAGAAGGAAGCGGGGTCGTGTTCGCAGCCGCTAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTCTGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAATCGAGCATCATCGATCATGGAGGCCTTCTCTTCAAAGCATTCCAGAGGATTACTGA ATGACCTTCTTCAAGACAGATTCTTACGAGACTTTTAGCCAATCCTCTACGATGGTCTTCGCCGGTGATGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCAGAAACGTTTCCGCTGCAACCTCCGGCGGCGATCCAGAGAAACATAGATTACTTGGAGAGAAGGAAGCGGGGTCGTGTTCGCAGCCGCTAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTCTGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAATCGAGCATCATCGATCATGGAGGCCTTCTCTTCAAAGCATTCCAGAGGATTACTGA MTFFKTDSYETFSQSSTMVFAGDDWGSFSSKHGRGCGRNVSAATSGGDPEKHRLLGEKEAGSCSQPLVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPEDY* Homology
BLAST of CsaV3_1G010810 vs. NCBI nr
Match: KAE8652667.1 (hypothetical protein Csa_013180 [Cucumis sativus]) HSP 1 Score: 246.9 bits (629), Expect = 9.2e-62 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. NCBI nr
Match: XP_011652689.2 (uncharacterized protein LOC105435046 [Cucumis sativus]) HSP 1 Score: 215.7 bits (548), Expect = 2.3e-52 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. NCBI nr
Match: KAA0056859.1 (DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYJ99362.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 200.3 bits (508), Expect = 9.9e-48 Identity = 104/113 (92.04%), Postives = 107/113 (94.69%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. NCBI nr
Match: XP_008446374.1 (PREDICTED: uncharacterized protein LOC103489132 [Cucumis melo]) HSP 1 Score: 192.6 bits (488), Expect = 2.1e-45 Identity = 99/108 (91.67%), Postives = 102/108 (94.44%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. NCBI nr
Match: XP_038895954.1 (uncharacterized protein LOC120084128 [Benincasa hispida]) HSP 1 Score: 184.5 bits (467), Expect = 5.6e-43 Identity = 97/113 (85.84%), Postives = 102/113 (90.27%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. ExPASy TrEMBL
Match: A0A0A0LRL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063490 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 5.3e-55 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. ExPASy TrEMBL
Match: A0A5A7UTK3 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005800 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 4.8e-48 Identity = 104/113 (92.04%), Postives = 107/113 (94.69%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. ExPASy TrEMBL
Match: A0A1S3BEX3 (uncharacterized protein LOC103489132 OS=Cucumis melo OX=3656 GN=LOC103489132 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.0e-45 Identity = 99/108 (91.67%), Postives = 102/108 (94.44%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. ExPASy TrEMBL
Match: A0A6J1EYG4 (uncharacterized protein LOC111440057 OS=Cucurbita moschata OX=3662 GN=LOC111440057 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 5.3e-39 Identity = 88/110 (80.00%), Postives = 96/110 (87.27%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. ExPASy TrEMBL
Match: A0A6J1KIA5 (uncharacterized protein LOC111495485 OS=Cucurbita maxima OX=3661 GN=LOC111495485 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38 Identity = 89/110 (80.91%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of CsaV3_1G010810 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 5.3e-07 Identity = 37/124 (29.84%), Postives = 69/124 (55.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|