CsaV3_1G010730 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTTTTCAGTTTTTAATTGGCCATTAAAACCCATCTCTGATTTCTCTCTGTTTTTGTGGTCTTCTCCTTTCCCACATTACATTCAAAACCTCTGTTCTTCCCCCTTCTCCTTCCCCTTTTCCTTTTCCTTCTTCTTTCTTTACACCTTCTCTCCCATTCTCCTCATGTTTTTTTGGATTATGAACAAAACCCATTTCAGGAATTCTTGAAAAAAGCTCTGCTTTTTTCTCAACAGAACTCTGCCACAAAAGCCTGGGTACTAAAATTCTACAGAATCTATTTTTATTTTGCCTTTTTCTTTTTCATTCCCGAGATGACTAATCTTTTACTTACTGTTGTTGTTGTTGTTTTTTTTTTTTTTTTCTCTTCTTCTTCTTCTCGTTAATCAGATATCAATGGCGAATTGGAGCAGTGCTTTGAGAAAAAACTATGGATTCAGTGATGATTTGGAAGAAGAAGATGTATGGAATTCTGTTGAAGGTAAAGAAGATTCTTCAAATTTCATCAGTAGAAAGTCTAGTGACTATTATTACTCCTCCTCTTCTTCTTCTTCTTCGTCCTTATCTTCTTCTTCTTCCACTTGGCGTCTCCCAACTGCTCCAAAAATGATCCCGAAATCCATTTCAACAAGAGCACATGAAACCCAGATGGCGAATAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGAAAAATGGGTTCGTCATCCACCGGGGATAAAGATGACGTTAGAGATCAAGAAGACGGTGAAGATGAGGATATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTAGCAAGAAGCAGAATTTCGTCATTCTCTGTTTGTGAAGGGGTTGGAAGAACTCTCAAAGGAAGAGATTTAAGTAAAGTTCGAAACGCCATTTTAACAAAGACGGGTTTTTTAGAGTGATTCTTTGCTTCTGTTTGAGAGATCATCATCATCTTCATCATTTTGTTCTGTGTTTTCTTGTTTGCTTTACTGCCATTGTTATGAGCTTAGTTAGAACAGAGTTCCTTCTTGTTTGTAGCTTTTTTTGGGTATTTAAAATGGAGTGGGAACTGTTTCATGTTCTATGATTTTGAGTTAAGAATGGTGTGTTGAAGTTCTTAGTTTATAGTGTTGTCCAATGCAAATTTTTTTAATATATTAATTGATAGATCTTCTTCTATCCTTCTTTTTGGGTTTTTATTAAATAACAAATTACTTACTAGGAT ATGGCGAATTGGAGCAGTGCTTTGAGAAAAAACTATGGATTCAGTGATGATTTGGAAGAAGAAGATGTATGGAATTCTGTTGAAGGTAAAGAAGATTCTTCAAATTTCATCAGTAGAAAGTCTAGTGACTATTATTACTCCTCCTCTTCTTCTTCTTCTTCGTCCTTATCTTCTTCTTCTTCCACTTGGCGTCTCCCAACTGCTCCAAAAATGATCCCGAAATCCATTTCAACAAGAGCACATGAAACCCAGATGGCGAATAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGAAAAATGGGTTCGTCATCCACCGGGGATAAAGATGACGTTAGAGATCAAGAAGACGGTGAAGATGAGGATATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTAGCAAGAAGCAGAATTTCGTCATTCTCTGTTTGTGAAGGGGTTGGAAGAACTCTCAAAGGAAGAGATTTAAGTAAAGTTCGAAACGCCATTTTAACAAAGACGGGTTTTTTAGAGTGA ATGGCGAATTGGAGCAGTGCTTTGAGAAAAAACTATGGATTCAGTGATGATTTGGAAGAAGAAGATGTATGGAATTCTGTTGAAGGTAAAGAAGATTCTTCAAATTTCATCAGTAGAAAGTCTAGTGACTATTATTACTCCTCCTCTTCTTCTTCTTCTTCGTCCTTATCTTCTTCTTCTTCCACTTGGCGTCTCCCAACTGCTCCAAAAATGATCCCGAAATCCATTTCAACAAGAGCACATGAAACCCAGATGGCGAATAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGAAAAATGGGTTCGTCATCCACCGGGGATAAAGATGACGTTAGAGATCAAGAAGACGGTGAAGATGAGGATATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTAGCAAGAAGCAGAATTTCGTCATTCTCTGTTTGTGAAGGGGTTGGAAGAACTCTCAAAGGAAGAGATTTAAGTAAAGTTCGAAACGCCATTTTAACAAAGACGGGTTTTTTAGAGTGA MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSNFISRKSSDYYYSSSSSSSSSLSSSSSTWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRDQEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE* Homology
BLAST of CsaV3_1G010730 vs. NCBI nr
Match: XP_004153812.1 (uncharacterized protein LOC101208118 [Cucumis sativus] >KGN64516.1 hypothetical protein Csa_014243 [Cucumis sativus]) HSP 1 Score: 340.9 bits (873), Expect = 6.7e-90 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. NCBI nr
Match: XP_008441031.1 (PREDICTED: uncharacterized protein LOC103485264 [Cucumis melo] >ADN34054.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0056852.1 zinc-regulated protein 8 [Cucumis melo var. makuwa] >TYJ99355.1 zinc-regulated protein 8 [Cucumis melo var. makuwa]) HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83 Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. NCBI nr
Match: XP_038894875.1 (uncharacterized protein LOC120083273 [Benincasa hispida]) HSP 1 Score: 302.4 bits (773), Expect = 2.6e-78 Identity = 162/179 (90.50%), Postives = 169/179 (94.41%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. NCBI nr
Match: XP_022139905.1 (uncharacterized protein LOC111010704 [Momordica charantia]) HSP 1 Score: 261.9 bits (668), Expect = 3.9e-66 Identity = 142/181 (78.45%), Postives = 158/181 (87.29%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. NCBI nr
Match: XP_022924226.1 (uncharacterized protein LOC111431737 [Cucurbita moschata] >KAG7019691.1 hypothetical protein SDJN02_18654 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 258.1 bits (658), Expect = 5.7e-65 Identity = 137/182 (75.27%), Postives = 149/182 (81.87%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. ExPASy TrEMBL
Match: A0A0A0LX30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062910 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 3.2e-90 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. ExPASy TrEMBL
Match: A0A5D3BLZ0 (Zinc-regulated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005720 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 5.9e-84 Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. ExPASy TrEMBL
Match: E5GC55 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 5.9e-84 Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. ExPASy TrEMBL
Match: A0A1S3B355 (uncharacterized protein LOC103485264 OS=Cucumis melo OX=3656 GN=LOC103485264 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 5.9e-84 Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. ExPASy TrEMBL
Match: A0A6J1CDL0 (uncharacterized protein LOC111010704 OS=Momordica charantia OX=3673 GN=LOC111010704 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.9e-66 Identity = 142/181 (78.45%), Postives = 158/181 (87.29%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 125.2 bits (313), Expect = 5.4e-29 Identity = 78/165 (47.27%), Postives = 102/165 (61.82%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 115.9 bits (289), Expect = 3.3e-26 Identity = 72/164 (43.90%), Postives = 102/164 (62.20%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. TAIR 10
Match: AT3G15040.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 83.2 bits (204), Expect = 2.3e-16 Identity = 58/137 (42.34%), Postives = 76/137 (55.47%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. TAIR 10
Match: AT4G26950.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 79.0 bits (193), Expect = 4.4e-15 Identity = 63/162 (38.89%), Postives = 86/162 (53.09%), Query Frame = 0
BLAST of CsaV3_1G010730 vs. TAIR 10
Match: AT4G26950.2 (Protein of unknown function, DUF584 ) HSP 1 Score: 79.0 bits (193), Expect = 4.4e-15 Identity = 63/162 (38.89%), Postives = 86/162 (53.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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