CsaV3_1G010460 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G010460
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr1: 6515525 .. 6517104 (-)
RNA-Seq Expression	CsaV3_1G010460
Synteny	CsaV3_1G010460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAATATAGTTTCTAGATTCCCCACTGCCTTCAATATTATTATTTTTAGGATCAAATGGCATCAAGAACACAAGCGTTTGACTTGATCTGAGAAATTACCCTTTCTTCTTTCCCATCTTAAATCCCCAGAATTAAATTTCTCACATCACATCAGAAACTAAGCTTAAGGTTGTAACTCAAGATATGACGTCGAGGGGATTTCTGAGTCCAAGAAGATCCAATCCCAGAAAGACGCCACCCGACCATCTATCAGGCACCATATCTGCCCCTGAATCAACCATTCACTTAGCAACTCCCACTTCCCATCAGCACCTGACTAAAGCAGCAACTCAACCTATAAGTCTTCAAACAAGAAAAAAAAAAGCTGGAATTGCCACTCCTAAGGATGGTTCGAGTCATCATAAGTTTTCTGATTCTCCAAATCATTCTCCCAGCCCTGTCAAAACTGCTGATCATCTTCTTCAAAATCAATTGCATCACCTCTCTATTCACGAAGGTGAGCTTACGTTTACTACCCTTTTCCTCAAATATTAGCTTTTTTTTTGTTTTTTTTTTTTTAAACTAACTGAATTTAATCTATTAGAAACACATTTTTTAAATTTTAGATCTCATTCTTCAAAAACTAGTTATGCCCCAGTTCGACAACGATTTTGTTCTTATATTTCTTTGTTTTTGATATTTATGTTTGTTTCCTGTATAGCTTTTTTTATTATGGTTTTTGTAACGCTGGGACTAAGGTTGAGTATTTAAAATCACATCTAAATGAGAGATTGTAAGGATGTAAAATTAAAGTAGCTTTACAAAAATAGATATAGCTACCATCTATACAAATAAAGTGATAAATATTTATATTTTTTTTGAATCAATCATAGGGAATCAAAGTGGGTTTGACTTTTAGTAATCCTATGTTTGGGTTAGTTCTTGTAATTTTCCTGCAGCAGTATTTTGTTTAAAAAAAATCATATTTCATATGAAAACATTGAATTTTGCACCAATATTATTGAAAATGTTGTGTAGTTAATGATGTTGTTGCGAACAACGTCCATCAATCAAGATCGATACACAAATCCGTGAGTTCAGATACAATTATTGAACAACATAATTCTGAGAGCAATTCTCCAACAATGTTACTTAAAATTTATGAGTTGATTGCATCTCATCGTCAAGGAAACACATCCATTAAATCTTACTTCAGAAACCTCAAGGCATTATGGAATGAAGCTGCAGCTTCTTCAATCAACCTTAATTCCCCTCAATCTTCATCCAATAATGCAATTGAGGAGCGGAGTGAGTTCATGGAAAGAGAAAAACTAATGCAATTTCTTTTGGGACTAAACGATTCTTATTCCTTACTTTGCTCCCAAATCCTTGCTGTGAGGCCATCTCCAACGGTGGACCAAGCTTATTCTCTTATAGTTGGAGAACAAAAAACTAGAAAATCTAAAATGACCAAGAAAAACACAATGTAGCAATGAAAATAAACATCTTGCCTTGTTCGTCAACAATGGTGATGATAAAGCTTCATTTTTTCTTCTTTTTGGTTGAATTGCATTTTATGTGTTTCATCATTCCTCCTCC

mRNA sequence

ATGACGTCGAGGGGATTTCTGAGTCCAAGAAGATCCAATCCCAGAAAGACGCCACCCGACCATCTATCAGGCACCATATCTGCCCCTGAATCAACCATTCACTTAGCAACTCCCACTTCCCATCAGCACCTGACTAAAGCAGCAACTCAACCTATAAGTCTTCAAACAAGAAAAAAAAAAGCTGGAATTGCCACTCCTAAGGATGGTTCGAGTCATCATAAGTTTTCTGATTCTCCAAATCATTCTCCCAGCCCTGTCAAAACTGCTGATCATCTTCTTCAAAATCAATTGCATCACCTCTCTATTCACGAAGTTAATGATGTTGTTGCGAACAACGTCCATCAATCAAGATCGATACACAAATCCGTGAGTTCAGATACAATTATTGAACAACATAATTCTGAGAGCAATTCTCCAACAATGTTACTTAAAATTTATGAGTTGATTGCATCTCATCGTCAAGGAAACACATCCATTAAATCTTACTTCAGAAACCTCAAGGCATTATGGAATGAAGCTGCAGCTTCTTCAATCAACCTTAATTCCCCTCAATCTTCATCCAATAATGCAATTGAGGAGCGGAGTGAGTTCATGGAAAGAGAAAAACTAATGCAATTTCTTTTGGGACTAAACGATTCTTATTCCTTACTTTGCTCCCAAATCCTTGCTGTGAGGCCATCTCCAACGGTGGACCAAGCTTATTCTCTTATAGTTGGAGAACAAAAAACTAGAAAATCTAAAATGACCAAGAAAAACACAATGTAG

Coding sequence (CDS)

ATGACGTCGAGGGGATTTCTGAGTCCAAGAAGATCCAATCCCAGAAAGACGCCACCCGACCATCTATCAGGCACCATATCTGCCCCTGAATCAACCATTCACTTAGCAACTCCCACTTCCCATCAGCACCTGACTAAAGCAGCAACTCAACCTATAAGTCTTCAAACAAGAAAAAAAAAAGCTGGAATTGCCACTCCTAAGGATGGTTCGAGTCATCATAAGTTTTCTGATTCTCCAAATCATTCTCCCAGCCCTGTCAAAACTGCTGATCATCTTCTTCAAAATCAATTGCATCACCTCTCTATTCACGAAGTTAATGATGTTGTTGCGAACAACGTCCATCAATCAAGATCGATACACAAATCCGTGAGTTCAGATACAATTATTGAACAACATAATTCTGAGAGCAATTCTCCAACAATGTTACTTAAAATTTATGAGTTGATTGCATCTCATCGTCAAGGAAACACATCCATTAAATCTTACTTCAGAAACCTCAAGGCATTATGGAATGAAGCTGCAGCTTCTTCAATCAACCTTAATTCCCCTCAATCTTCATCCAATAATGCAATTGAGGAGCGGAGTGAGTTCATGGAAAGAGAAAAACTAATGCAATTTCTTTTGGGACTAAACGATTCTTATTCCTTACTTTGCTCCCAAATCCTTGCTGTGAGGCCATCTCCAACGGTGGACCAAGCTTATTCTCTTATAGTTGGAGAACAAAAAACTAGAAAATCTAAAATGACCAAGAAAAACACAATGTAG

Protein sequence

MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATPTSHQHLTKAATQPISLQTRKKKAGIATPKDGSSHHKFSDSPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQSRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAASSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGEQKTRKSKMTKKNTM*

Homology

[Close]

BLAST of CsaV3_1G010460 vs. NCBI nr
Match: XP_011652556.2 (uncharacterized protein LOC105435030 [Cucumis sativus] >KAE8652654.1 hypothetical protein Csa_014113 [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 3.1e-133
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATPTSHQHLTKAATQPISLQTRKKK 60
           MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATPTSHQHLTKAATQPISLQTRKKK
Sbjct: 1   MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATPTSHQHLTKAATQPISLQTRKKK 60

Query: 61  AGIATPKDGSSHHKFSDSPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQSRSIH 120
           AGIATPKDGSSHHKFSDSPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQSRSIH
Sbjct: 61  AGIATPKDGSSHHKFSDSPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQSRSIH 120

Query: 121 KSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAASSINL 180
           KSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAASSINL
Sbjct: 121 KSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAASSINL 180

Query: 181 NSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGE 240
           NSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGE
Sbjct: 181 NSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGE 240

Query: 241 QKTRKSKMTKKNTM 255
           QKTRKSKMTKKNTM
Sbjct: 241 QKTRKSKMTKKNTM 254

[Close]

BLAST of CsaV3_1G010460 vs. NCBI nr
Match: XP_004154160.1 (uncharacterized protein LOC101211799 [Cucumis sativus] >KAE8652656.1 hypothetical protein Csa_013260 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 2.3e-83
Identity = 186/262 (70.99%), Postives = 206/262 (78.63%), Query Frame = 0


Query: 1   MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATP--TSHQHLTKAATQPISLQTRK 60
           M  RG +SPRRS P+KTPP HL G+ SAPE TI    P  TS++  TK+A+QP     + 
Sbjct: 1   MEPRGIISPRRSKPKKTPPAHLPGSTSAPELTIQSEIPSTTSNRRTTKSASQPSPSTKKG 60

Query: 61  KKAGIATPKD----GSSHHKFSD-SPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNV 120
           K  G  + KD    GSSH K SD SPNHSPSP KT DHLLQ+ L  LSIH+VND VANNV
Sbjct: 61  KAGGSGSRKDGSGSGSSHKKNSDYSPNHSPSPAKTRDHLLQSPLQQLSIHDVND-VANNV 120

Query: 121 HQSRSIHKSVSSDTIIE-QHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNE 180
           HQSRSIHK+VSSDTIIE QHNSESN+ TML KIY +IASHRQGNTSIKSYF+NLKALW+E
Sbjct: 121 HQSRSIHKTVSSDTIIEQQHNSESNAATMLFKIYGVIASHRQGNTSIKSYFKNLKALWDE 180

Query: 181 AAASSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQ 240
           AAASSI+ NSPQSSSNN   E+S  MEREKLMQFLLGLNDSYS LCSQIL  RPSPTVDQ
Sbjct: 181 AAASSIHTNSPQSSSNNTTVEQSGLMEREKLMQFLLGLNDSYSSLCSQILLERPSPTVDQ 240

Query: 241 AYSLIVGEQKTRKSKMTKKNTM 255
           AYSLI+ E+KTRKSKM KKN M
Sbjct: 241 AYSLIILEEKTRKSKMAKKNIM 261

[Close]

BLAST of CsaV3_1G010460 vs. NCBI nr
Match: KAA0056834.1 (uncharacterized protein E6C27_scaffold96G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 2.6e-47
Identity = 137/256 (53.52%), Postives = 160/256 (62.50%), Query Frame = 0


Query: 1   MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATP--TSHQHLTKAATQPISLQTRK 60
           M SRG LSPRRSNP +TPP HL G+ SAPE TI  A P  TS++  TK          + 
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTK----------KG 60

Query: 61  KKAGIATPKDGS--SHHKFSD-SPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQ 120
           K  G  + KDGS  SH KFSD SPNHSPSP +T D      L  LSIH            
Sbjct: 61  KAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD------LQQLSIH------------ 120

Query: 121 SRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAA 180
                     D   EQ+N ESN+P +L KIY+ IA HRQG TSIK+Y+ NLKALWNEAA+
Sbjct: 121 ----------DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAAS 180

Query: 181 SSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYS 240
           S+   NSPQSSSN AI +  E MER+KLM FLLGL DSYS LCSQ L ++PS TVD+AYS
Sbjct: 181 STCT-NSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYS 215

Query: 241 LIVGEQKTRKSKMTKK 252
            I+ E+K RK   +KK
Sbjct: 241 TIIREKKGRKCSTSKK 215

[Close]

BLAST of CsaV3_1G010460 vs. NCBI nr
Match: XP_008440818.1 (PREDICTED: uncharacterized protein LOC103485124 [Cucumis melo] >TYJ99335.1 uncharacterized protein E5676_scaffold248G005510 [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 1.0e-46
Identity = 136/256 (53.12%), Postives = 159/256 (62.11%), Query Frame = 0


Query: 1   MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATP--TSHQHLTKAATQPISLQTRK 60
           M SRG LSPRRSNP +TPP HL G+ SAPE TI  A P  TS++  TK          + 
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTK----------KG 60

Query: 61  KKAGIATPKDGS--SHHKFSD-SPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQ 120
           K  G  + KDGS  SH KFSD SPNHSPSP +T D      L  LSIH            
Sbjct: 61  KAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD------LQQLSIH------------ 120

Query: 121 SRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAA 180
                     D   EQ+N ESN+P +L KIY+ IA HRQG TSIK+Y+ NLK LWNEAA+
Sbjct: 121 ----------DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKQLWNEAAS 180

Query: 181 SSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYS 240
           S+   NSPQSSSN AI +  E MER+KLM FLLGL DSYS LCSQ L ++PS TVD+AYS
Sbjct: 181 STCT-NSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYS 215

Query: 241 LIVGEQKTRKSKMTKK 252
            I+ E+K RK   +KK
Sbjct: 241 TIIREKKGRKCSTSKK 215

[Close]

BLAST of CsaV3_1G010460 vs. NCBI nr
Match: XP_038893970.1 (uncharacterized protein LOC120082755 isoform X1 [Benincasa hispida])

HSP 1 Score: 177.6 bits (449), Expect = 1.4e-40
Identity = 128/263 (48.67%), Postives = 157/263 (59.70%), Query Frame = 0


Query: 1   MTSRGFLSPRRSNPRKTPP------------DHLSGTISAPESTIHLATPTSHQHLTKAA 60
           M +RGFLSPRRS P  T              +H S TIS+   +   +T    Q +  + 
Sbjct: 1   MATRGFLSPRRSRPGATEQGGSDERKNQYKMNHRSSTISSLNPSKSPSTENLQQEVAAS- 60

Query: 61  TQPISLQTRKKKAGIATPKDGSSHHKFSDSPNHSPSPVKTADHLLQNQLHHLSIHEVNDV 120
                      K GI + K         +S  +S +P  T     +         +V D 
Sbjct: 61  ----------NKKGIFSSKSA------PESALNSATPAPTRRTTKKG--------KVKD- 120

Query: 121 VANNVHQSRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKA 180
                   +SIHKSVSSDT I+Q+NS+SN+PT+L KIYE IASHR GN++IKSYFRNLKA
Sbjct: 121 -----DGGKSIHKSVSSDT-IDQYNSQSNAPTILCKIYEEIASHRHGNSTIKSYFRNLKA 180

Query: 181 LWNEAAASSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSP 240
           LW+EAAA +        SS++ I E++E MEREKLMQFLLGLNDSYS LCSQIL VRPSP
Sbjct: 181 LWDEAAAPT------NPSSSDQIVEQTELMEREKLMQFLLGLNDSYSSLCSQILLVRPSP 225

Query: 241 TVDQAYSLIVGEQKTRKSKMTKK 252
           TVDQAYSLIV E+KTRKSK +KK
Sbjct: 241 TVDQAYSLIVREEKTRKSKTSKK 225

[Close]

BLAST of CsaV3_1G010460 vs. ExPASy TrEMBL
Match: A0A0A0LRX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G059720 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.8e-118
Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 25  TISAPESTIHLATPTSHQHLTKAATQPISLQTRKKKAGIATPKDGSSHHKFSDSPNHSPS 84
           TISAPESTIHLATPTSHQHLTKAATQPISLQTRKKKAGIATPKDGSSHHKFSDSPNHSPS
Sbjct: 8   TISAPESTIHLATPTSHQHLTKAATQPISLQTRKKKAGIATPKDGSSHHKFSDSPNHSPS 67

Query: 85  PVKTADHLLQNQLHHLSIHEVNDVVANNVHQSRSIHKSVSSDTIIEQHNSESNSPTMLLK 144
           PVKTADHLLQNQLHHLSIHEVNDVVANNVHQSRSIHKSVSSDTIIEQHNSESNSPTMLLK
Sbjct: 68  PVKTADHLLQNQLHHLSIHEVNDVVANNVHQSRSIHKSVSSDTIIEQHNSESNSPTMLLK 127

Query: 145 IYELIASHRQGNTSIKSYFRNLKALWNEAAASSINLNSPQSSSNNAIEERSEFMEREKLM 204
           IYELIASHR+GNTSIKSYFRNLKALWNEAAASSINLNSPQSSSNNAIEERSEFMEREKLM
Sbjct: 128 IYELIASHRKGNTSIKSYFRNLKALWNEAAASSINLNSPQSSSNNAIEERSEFMEREKLM 187

Query: 205 QFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGEQKTRKSKMTKKNTM 255
           QFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGEQKTRKSKMTKKNTM
Sbjct: 188 QFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGEQKTRKSKMTKKNTM 237

[Close]

BLAST of CsaV3_1G010460 vs. ExPASy TrEMBL
Match: A0A5A7UNP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00010 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47
Identity = 137/256 (53.52%), Postives = 160/256 (62.50%), Query Frame = 0


Query: 1   MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATP--TSHQHLTKAATQPISLQTRK 60
           M SRG LSPRRSNP +TPP HL G+ SAPE TI  A P  TS++  TK          + 
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTK----------KG 60

Query: 61  KKAGIATPKDGS--SHHKFSD-SPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQ 120
           K  G  + KDGS  SH KFSD SPNHSPSP +T D      L  LSIH            
Sbjct: 61  KAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD------LQQLSIH------------ 120

Query: 121 SRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAA 180
                     D   EQ+N ESN+P +L KIY+ IA HRQG TSIK+Y+ NLKALWNEAA+
Sbjct: 121 ----------DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAAS 180

Query: 181 SSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYS 240
           S+   NSPQSSSN AI +  E MER+KLM FLLGL DSYS LCSQ L ++PS TVD+AYS
Sbjct: 181 STCT-NSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYS 215

Query: 241 LIVGEQKTRKSKMTKK 252
            I+ E+K RK   +KK
Sbjct: 241 TIIREKKGRKCSTSKK 215

[Close]

BLAST of CsaV3_1G010460 vs. ExPASy TrEMBL
Match: A0A5D3BLX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005510 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 4.8e-47
Identity = 136/256 (53.12%), Postives = 159/256 (62.11%), Query Frame = 0


Query: 1   MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATP--TSHQHLTKAATQPISLQTRK 60
           M SRG LSPRRSNP +TPP HL G+ SAPE TI  A P  TS++  TK          + 
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTK----------KG 60

Query: 61  KKAGIATPKDGS--SHHKFSD-SPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQ 120
           K  G  + KDGS  SH KFSD SPNHSPSP +T D      L  LSIH            
Sbjct: 61  KAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD------LQQLSIH------------ 120

Query: 121 SRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAA 180
                     D   EQ+N ESN+P +L KIY+ IA HRQG TSIK+Y+ NLK LWNEAA+
Sbjct: 121 ----------DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKQLWNEAAS 180

Query: 181 SSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYS 240
           S+   NSPQSSSN AI +  E MER+KLM FLLGL DSYS LCSQ L ++PS TVD+AYS
Sbjct: 181 STCT-NSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYS 215

Query: 241 LIVGEQKTRKSKMTKK 252
            I+ E+K RK   +KK
Sbjct: 241 TIIREKKGRKCSTSKK 215

[Close]

BLAST of CsaV3_1G010460 vs. ExPASy TrEMBL
Match: A0A1S3B205 (uncharacterized protein LOC103485124 OS=Cucumis melo OX=3656 GN=LOC103485124 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 4.8e-47
Identity = 136/256 (53.12%), Postives = 159/256 (62.11%), Query Frame = 0


Query: 1   MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATP--TSHQHLTKAATQPISLQTRK 60
           M SRG LSPRRSNP +TPP HL G+ SAPE TI  A P  TS++  TK          + 
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTK----------KG 60

Query: 61  KKAGIATPKDGS--SHHKFSD-SPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQ 120
           K  G  + KDGS  SH KFSD SPNHSPSP +T D      L  LSIH            
Sbjct: 61  KAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD------LQQLSIH------------ 120

Query: 121 SRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAA 180
                     D   EQ+N ESN+P +L KIY+ IA HRQG TSIK+Y+ NLK LWNEAA+
Sbjct: 121 ----------DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKQLWNEAAS 180

Query: 181 SSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYS 240
           S+   NSPQSSSN AI +  E MER+KLM FLLGL DSYS LCSQ L ++PS TVD+AYS
Sbjct: 181 STCT-NSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYS 215

Query: 241 LIVGEQKTRKSKMTKK 252
            I+ E+K RK   +KK
Sbjct: 241 TIIREKKGRKCSTSKK 215

[Close]

BLAST of CsaV3_1G010460 vs. ExPASy TrEMBL
Match: A0A6J1C5Z8 (uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008588 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-22
Identity = 90/239 (37.66%), Postives = 137/239 (57.32%), Query Frame = 0


Query: 12  SNPRKTPPDHLSGTISAPESTIHLATPTSHQH----LTKAATQPISLQTRKKKAGIATPK 71
           S+PR T P  L   +  P     ++  T+ +        +A++  S       +    P 
Sbjct: 158 SSPR-TQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPS 217

Query: 72  DGSSHHKFSDSPNHSPSPVKT----ADHLLQNQLHHLSIHEVNDVVANNVHQSRSIHKSV 131
            GS+ H   D  NHSP    T    AD  L N L  LSI   +  +A+ +  + SI++S+
Sbjct: 218 PGSAQH--HDMKNHSPYSGGTYTPLADPQLNNHLQRLSIDGKD--LASIILHANSIYESI 277

Query: 132 SSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAASSINLNSP 191
            SDT+  + + +SN+P  + +IY+ IASHRQ N+S+ SYF  LK LW+E    S ++  P
Sbjct: 278 GSDTM--EESFQSNAP-RIFQIYKDIASHRQENSSVTSYFTKLKILWDELETYSDDV--P 337

Query: 192 QSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGEQK 243
           Q  S  A+E+ S  +EREK+MQFL+GLN+SYS +C QIL ++P PT+++AYS+I+ E+K
Sbjct: 338 QCCSCGAMEKLSGHVEREKVMQFLMGLNNSYSTICPQILLIQPFPTMEKAYSIIIREEK 386

The following BLAST results are available for this feature:

BLAST of CsaV3_1G010460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652556.2	3.1e-133	100.00	uncharacterized protein LOC105435030 [Cucumis sativus] >KAE8652654.1 hypothetica...	[more]
XP_004154160.1	2.3e-83	70.99	uncharacterized protein LOC101211799 [Cucumis sativus] >KAE8652656.1 hypothetica...	[more]
KAA0056834.1	2.6e-47	53.52	uncharacterized protein E6C27_scaffold96G00010 [Cucumis melo var. makuwa]	[more]
XP_008440818.1	1.0e-46	53.13	PREDICTED: uncharacterized protein LOC103485124 [Cucumis melo] >TYJ99335.1 uncha...	[more]
XP_038893970.1	1.4e-40	48.67	uncharacterized protein LOC120082755 isoform X1 [Benincasa hispida]	[more]

BLAST of CsaV3_1G010460 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G010460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRX9	1.8e-118	99.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G059720 PE=4 SV=1	[more]
A0A5A7UNP6	1.3e-47	53.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BLX6	4.8e-47	53.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B205	4.8e-47	53.13	uncharacterized protein LOC103485124 OS=Cucumis melo OX=3656 GN=LOC103485124 PE=...	[more]
A0A6J1C5Z8	1.9e-22	37.66	uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of CsaV3_1G010460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75
None	No IPR available	PANTHER	PTHR34222:SF6	OS02G0671800 PROTEIN	coord: 105..245
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 105..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G010460.1	CsaV3_1G010460.1	mRNA