
CsaV3_1G002250 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCTGGAGCAGGTAGTTTTTTTAAGGTCATCCTAAAAAACTTCGATGTTCTTGCCGGGTATGTTTCTCTCCTCTTGATTATGATTTTCCCAAATGAGGGTTCGTTTTTTCTTTGCCATGGCGAACTAGAAAACTTCTTTAGACTAATTATCTGTTAACCTCAATATCATCTGTTCATGAACGATCAAATTAGCTACGTGTTTAGTGGAAGGAATAATGAGAACCCCAACTTCTTTGCATATGCCACCAATTTGTGTTTGCAAGGGCTCCAGGTTAGGTGGAATGGGTCCTGAAATATATTGTAGCCATCGGTAGAAAATTGATATCATCTCTGCTTAGTAAAATCTACAGTTTCTAATCTTTGACAATCCTGTCAATGAGTATCAGTTGGGGAACTGAAAACTGACTTAGCTGGTTTACCGCAGATCTGAGGCCTGTCATTGTTAAGTATTATAGGCTGTACTTCTAGTCCAACTAAATCTACCATGAAATAATGAAGGATCTTTGAATGGAGCACTCTATCCAGTCCCATTGGTTAAGGACTTGGTTTTGTTGTTGTATATTTCAGTTTTTGCTCATAACACATGTAAGCTTTCCTGTCAAGGGACTACGAAACCTGCTAGTTATTTTGTTTCATATAAACAATTAAGTTTGTTGAAACCCTTTGGGAACCGAACAAGCCTTGACCTTATTATCGTGTTCTTATGTTAAGAAGCAGTATGTAGTTGATCACTGGTGGTTTAGCACTGGATAACTTTTCAGCTTTTTACGCATCCTAAGCATATAATCTTTAGTACTTGGGGATGTCATTTTGTAGTTCTATGATTAGTTTTCAAGAGCATTTAGCATGCACCAGATCTCCTGAGGCCAAATATTCCAACACAAAGACCTCTAGTCTTGGTTATGTTCCAAGTAGAAAACCTTCTAGGTCAAGTGATTCACTTTTTAAAGCACCTGGGGTCTTTGTAATTTGATCTTCTATGATTGACTGTAACTACCACGACCTTCTAGTGAGTAGAGGGATATGGAGGAACAATCATGCACAACTTGCACAACATATGGATCTGACTAGATCAAGAAGCCATTGATGATACCCTTAAAGAAGATTGAGAGGAAACTGTACAGCAATGCTATTTGTGCTCATTAGTTGTGAATAATAATTGTACATGTCTGTATATGACTAGCTTCTTTTTCCACTCTATTTAAAATATTTTCTGATTGCTATCAGAATCATGTAAGTGGACACCATCAAATTCTTAACTTCATTCCTGGGTTTCATTTGCAGGCCTCTTGTGAGTCTAGTATATCCTCTGTAAGTGGTTCTGCTTCTTTGTTTAGCTTTCTATCCTTATCTTGAACGACGCCTTTGGACTGTTTGACAGTCGCATCCCAAAATTGTAGCTCCAATGTTTTCTATTTGGCAGCTATGCATCAGTTAGAGCCATAGAAACAAAGTCTCCTGTGGACGATCAGCAATGGCTTACTTACTGGATTCTGTATTCTATGCTCACACTCTTTGAGCTTACATTTGCAAAACTTCTTGAATGGTAAATTTTCTTTAGTTTAGAAATTGCGTTTTGCTTATTTTATTATACAGTTCTATGGCTTTCAGTTTGTGAAAATTAAAGCTCCCTGGGTCTATATGTGAGTTATTTTTTTTCTTGTTACACTGATGTTAGTTAATTTGCTTGAGATTAGGACTTAGAATTTCAAATCCCATATATGATTATGATAAGTTGATATTTTATTAGAACTGGTTGAAATTCACTGATGAAGTTCCAATTTTTCCTATTAAATCTTTACATAGGATCCCTATCTGGCCATATGCAAAGTTGATTTTGTCATGCTGGTTAGTCATTCCATACTTCAGTGGTGCTGCATATGTGTACGAGCATTTCGTGAGGCCTCTATTCATCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGACTTCTTCAGCAAGCCCGATGACATCCTAACTGCTGCAGAAAAGTACATTGCTGAAAATGGGACTGAAGGCCTCCAAAACATCATCAACAGGGTATATGCACTCTGACTCGGTCTCCAATTAGTTAGTTTTAACTGACCTTGCTGATACATATAAATGTTTTTTCATTTTATTTCTGTAGGCTGATAAGGCTCGAACGAGTAACCGTTACATGAGCTATACTGAGAACCACGACCAAGACCATGATCACGACCACGACTACAACCATGATTACTGGCACTAG ATGGGATCTGGAGCAGGTAGTTTTTTTAAGGTCATCCTAAAAAACTTCGATGTTCTTGCCGGGCCTCTTGTGAGTCTAGTATATCCTCTCTATGCATCAGTTAGAGCCATAGAAACAAAGTCTCCTGTGGACGATCAGCAATGGCTTACTTACTGGATTCTGTATTCTATGCTCACACTCTTTGAGCTTACATTTGCAAAACTTCTTGAATGGATCCCTATCTGGCCATATGCAAAGTTGATTTTGTCATGCTGGTTAGTCATTCCATACTTCAGTGGTGCTGCATATGTGTACGAGCATTTCGTGAGGCCTCTATTCATCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGACTTCTTCAGCAAGCCCGATGACATCCTAACTGCTGCAGAAAAGTACATTGCTGAAAATGGGACTGAAGGCCTCCAAAACATCATCAACAGGGCTGATAAGGCTCGAACGAGTAACCGTTACATGAGCTATACTGAGAACCACGACCAAGACCATGATCACGACCACGACTACAACCATGATTACTGGCACTAG ATGGGATCTGGAGCAGGTAGTTTTTTTAAGGTCATCCTAAAAAACTTCGATGTTCTTGCCGGGCCTCTTGTGAGTCTAGTATATCCTCTCTATGCATCAGTTAGAGCCATAGAAACAAAGTCTCCTGTGGACGATCAGCAATGGCTTACTTACTGGATTCTGTATTCTATGCTCACACTCTTTGAGCTTACATTTGCAAAACTTCTTGAATGGATCCCTATCTGGCCATATGCAAAGTTGATTTTGTCATGCTGGTTAGTCATTCCATACTTCAGTGGTGCTGCATATGTGTACGAGCATTTCGTGAGGCCTCTATTCATCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGACTTCTTCAGCAAGCCCGATGACATCCTAACTGCTGCAGAAAAGTACATTGCTGAAAATGGGACTGAAGGCCTCCAAAACATCATCAACAGGGCTGATAAGGCTCGAACGAGTAACCGTTACATGAGCTATACTGAGAACCACGACCAAGACCATGATCACGACCACGACTACAACCATGATTACTGGCACTAG MGSGAGSFFKVILKNFDVLAGPLVSLVYPLYASVRAIETKSPVDDQQWLTYWILYSMLTLFELTFAKLLEWIPIWPYAKLILSCWLVIPYFSGAAYVYEHFVRPLFINKQTVNIWYVPKMKDFFSKPDDILTAAEKYIAENGTEGLQNIINRADKARTSNRYMSYTENHDQDHDHDHDYNHDYWH* Homology
BLAST of CsaV3_1G002250 vs. NCBI nr
Match: XP_004138159.1 (HVA22-like protein a [Cucumis sativus] >KGN63661.1 hypothetical protein Csa_014222 [Cucumis sativus]) HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. NCBI nr
Match: KAA0057935.1 (HVA22-like protein a [Cucumis melo var. makuwa] >TYJ98622.1 HVA22-like protein a [Cucumis melo var. makuwa]) HSP 1 Score: 361.7 bits (927), Expect = 3.8e-96 Identity = 179/185 (96.76%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. NCBI nr
Match: XP_008453193.1 (PREDICTED: HVA22-like protein a [Cucumis melo] >XP_008453194.1 PREDICTED: HVA22-like protein a [Cucumis melo]) HSP 1 Score: 357.1 bits (915), Expect = 9.4e-95 Identity = 177/185 (95.68%), Postives = 178/185 (96.22%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. NCBI nr
Match: KAG6589501.1 (HVA22-like protein a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 342.8 bits (878), Expect = 1.8e-90 Identity = 170/185 (91.89%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. NCBI nr
Match: XP_038879287.1 (HVA22-like protein a [Benincasa hispida]) HSP 1 Score: 340.9 bits (873), Expect = 7.0e-90 Identity = 169/184 (91.85%), Postives = 176/184 (95.65%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.1e-68 Identity = 122/177 (68.93%), Postives = 151/177 (85.31%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 4.5e-47 Identity = 95/178 (53.37%), Postives = 131/178 (73.60%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 182.2 bits (461), Expect = 5.4e-45 Identity = 94/171 (54.97%), Postives = 122/171 (71.35%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.5e-29 Identity = 58/96 (60.42%), Postives = 74/96 (77.08%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 3.7e-25 Identity = 57/88 (64.77%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy TrEMBL
Match: A0A0A0LUH0 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G009650 PE=3 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 8.6e-102 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy TrEMBL
Match: A0A5A7UWG1 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002450 PE=3 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96 Identity = 179/185 (96.76%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy TrEMBL
Match: A0A1S3BWS9 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103493983 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.6e-95 Identity = 177/185 (95.68%), Postives = 178/185 (96.22%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy TrEMBL
Match: A0A6J1E1G0 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429946 PE=3 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 4.4e-90 Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. ExPASy TrEMBL
Match: A0A6J1C536 (HVA22-like protein OS=Momordica charantia OX=3673 GN=LOC111007471 PE=3 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 7.5e-90 Identity = 167/185 (90.27%), Postives = 173/185 (93.51%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 260.0 bits (663), Expect = 1.5e-69 Identity = 122/177 (68.93%), Postives = 151/177 (85.31%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 189.1 bits (479), Expect = 3.2e-48 Identity = 95/178 (53.37%), Postives = 131/178 (73.60%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 182.2 bits (461), Expect = 3.9e-46 Identity = 94/171 (54.97%), Postives = 122/171 (71.35%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 130.2 bits (326), Expect = 1.7e-30 Identity = 58/96 (60.42%), Postives = 74/96 (77.08%), Query Frame = 0
BLAST of CsaV3_1G002250 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 116.3 bits (290), Expect = 2.6e-26 Identity = 57/88 (64.77%), Postives = 65/88 (73.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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