CsaV3_1G000650 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G000650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	EF hand calcium-binding family protein
Location	chr1: 374744 .. 378031 (-)
RNA-Seq Expression	CsaV3_1G000650
Synteny	CsaV3_1G000650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGCCCATTTCTTTACCAAGCCTCCGCTATTGGGCTATTATTGGGCCCGGCCCGGTCCTCACAACAAACATATTCTATTGCGTCATAAAGAGGACACGTGGTTTACGTGTGTTGAACAAAAGAACGAAAACGTTTTAAACACCGATTTGGAAGTGATATATGGAATGACATTCAACTATTTTATTTACTAACCTTTATTTTATTATCCATTAACTCTTAAATTTATGTTTCTAATTTTTAGTTTTGTATCAAATTAATTTTTAGGGAATTGGGTGAAACTAAATATAACAAAAATGAAAGAAAAAAAAAAAACTTCCATCATTTTTTCTCTATATATTTTTACCAAAATTTCTTATTTTTTTCTTAAAATTTCATCGATTAAATATTTAATATTGAATTGTGTTTAATATATATATATATATTACAAAAGTTTGTAACAAATTAAATACCCACCGTTTTATTAGGGTATTTATAATTGATACTAATTTTAGGTATAATAATTAAGTACATACCAATATTTTAAAAAAATCGTAAATATAGTAAAATCTATTTGTGACACTCATAGATCTATTCGTAGTAGACTAATTTTACAACATGATCTACTAGTGATAAAATATATTTTAACATTTTTACTATATTTTAATATTTTAAAAGATCACTATATATTTAATTATTTCAAATATAGTTGTTATATTTACAATTATCTCGTTTTATTAGATTTGAGAAATCCATTGGTCACAACCCTAAAAGTTCTAACCATAAGAATGATTTTTGGGATTCAACTAATGATTAAATTCGAACACCCAAACTTTTAAACTCTATAGGTAGTTTGACATAAATTTATTTTTTAAAAAATATTGCATCAACGAAGAAATTGTTATATATATATATATGAATTTTTGAAGACCCAAAATATTATACAATGACTCGTTATTTATTTCTTTCTTTCTATCCTTTTTTCAACACAAATTGACGGAATAAACAAAATTTCAGTCCTAATTTCCAACTAAAGTTTCAAAATTTATGGTTTGAAAATAAATCTAGAAATTGTACGTTGTTTTCTTTAAAAATAAAAATTAATTAGAGGAAAAACAACGCTAAAGCAACGGAGAATGACTTTCATTAATTAAAATAAGTATTTTAAATTTAAACGGCGAAAAATCAAAATGTGACTCAAAGCCTTATGAACACATGCATGCATTTCATACTTAATATGCTTTCCAAAAACTTTATTTTAATTTCAATTTACGAGTTTATTATAATCATTCTTACCTACTTTTTCTAAATGTTACTATTACAAAAGTAATGAAGACAAAAAGTTGTTGAATAAGAGCATCTATATTCTATTCTACGAAAATAAAGAAAGTACTAAAAATATTTGAAAGATAGGAATTTGGGTGAAAAACAACTTTGAATTAAGAGAAAATTGATTAACAAACAAAATCATAAATAATAATTTAATCTCCCGACCTTAATTATAAAAACACTATTTCAAAGCTTGCAGTAACTCACATCTCTTTTCTGCTCTTTAACCGTGAGTAAAAAATAAACGTAGTTAAGGTTAACACATTAAAATTTAAAATGTTCCTAATCGATACAATTGAAAACCAATCAATAAACCCTTTTTTATATCTCATAACTTTTCTAGATATTTTGTAAGGTATGAGAAACTCGTGATTTTCCTCTAACTTTTCATTATAAATATAAGTTTACAATCTTTCTAAATCAGTTTTAACATAAATCCAACTAAAATTGTAAACGACATAGATTCATGGATTCAAATTTACCTAACTAATTTCTTTAAAAAGTATAAAGTTTAAATTAGGCTGATTTTCATAAATATAACAAAACACCAAAATATTTACGATCCGCGTAACAAAATTAAAAAATTCATCATGGAACTTGCTATTTTTTTAAGATATAACCATTTTGCCATTCCATTTCATTTTCTTTCCCATGCAATTTTCTTTTTTCTTCCATCATCTTTTTCTATTCTTTTATAACTTAAACAATCATTTACCAAATATGTGTAACAAACAACAACCAAACAAATATATTAGATACAACAAAATCATTTTTTATATTTTTATGTGTAGATTTTTTCTATTTTTGAAATTATTATATTTTTTCGATTCGTTATATTTTTTAAAGAAAATAATAGATTTTACAAAATATTTAGAACGTGTAACAAATTTTATAAACTATTAATATGGTATGATAATATAAGACTATAATGGTACGGTTAGTAAATATTTTAATTTATTTACTATTTACAAAAATGTCCCTGTCTTTTGATGAATAAAACGTCAGCAGGGGATAAATGCGAACGTAAAAGTTGCGTCCGCCAAAAATAATTTATTTGTATCTTCCAAACAAAGAAAATATATTATATATATATTTATATATATTTGCATTTGGAGGCATCTGGATGAGTCTGGGAGGGTAACCGATAAGCACAATCCACAAATATACTAAACGCGGTTTTCAGCCGTCGTTTCAATTACTTATTTATTATAACAATATTAATAATAAATGTGAAGTACGTGGCAGTTGACCGTTATTCTAATTTAAATATTAAAACTTAGATATTTCTAGATTCCTCCCCTATTCTTTACCCATTTCTATTTTTGACCCAAAACACAAACACGTTCTTCTTTTTCTTCTCTCCTTTGAATTATACACCTTTCCCTACCTTTTTCCCTCTTTCCTTCGCCGCAGTTTCCACAATTTTGCCGAAGCCTATAAATACGATACACAATTTTCTGAATCGACAAAAACAATCCAAACTGATCAGAGAATAACCCACAAATAAATTAGGATTCCTTTTCCTTCCTTTTTTGTAATCTCTAATTGAAATGGAGATCGTTAAGAGTGGTGCACAGTACGATCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGGAAGATATCGCCGTCGGAGCTGAGGAATCGGCTGGGATTGATTGGAGGAGAGCTGCAGCAGGCGGAGGCTGAGGCGGCGGTGGAATCGCTGGACTCGGACGGGGATGGTTTGCTGTGTGTGGGGGATATCGAACGGTTACTGGAGGTTGGGGAGGAAGAGAAGTTGAAGGATTTGAAGGAGGCGTTTGCTCTGTATGATAGTGAAGGTTGCGGGTTCATAACTCCCAAGAACTTGAAGAAAATGCTTAGGAAATTAGGGGAGAGGAAATCGACGGAGGAGTGTAAAATGATGATTCGTCGCTTTGATTTGAACGGTGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCTTAG

mRNA sequence

ATGTGGGCCCATTTCTTTACCAAGCCTCCGCTATTGGGCTATTATTGGGCCCGGCCCGGTCCTCACAACAAACATATTCTATTGCGTCATAAAGAGGACACGTGGTTTACGTGTGTTGAACAAAAGAACGAAAACGTTTTAAACACCGATTTGGAAATCGTTAAGAGTGGTGCACAGTACGATCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGGAAGATATCGCCGTCGGAGCTGAGGAATCGGCTGGGATTGATTGGAGGAGAGCTGCAGCAGGCGGAGGCTGAGGCGGCGGTGGAATCGCTGGACTCGGACGGGGATGGTTTGCTGTGTGTGGGGGATATCGAACGGTTACTGGAGGTTGGGGAGGAAGAGAAGTTGAAGGATTTGAAGGAGGCGTTTGCTCTGTATGATAGTGAAGGTTGCGGGTTCATAACTCCCAAGAACTTGAAGAAAATGCTTAGGAAATTAGGGGAGAGGAAATCGACGGAGGAGTGTAAAATGATGATTCGTCGCTTTGATTTGAACGGTGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCTTAG

Coding sequence (CDS)

ATGTGGGCCCATTTCTTTACCAAGCCTCCGCTATTGGGCTATTATTGGGCCCGGCCCGGTCCTCACAACAAACATATTCTATTGCGTCATAAAGAGGACACGTGGTTTACGTGTGTTGAACAAAAGAACGAAAACGTTTTAAACACCGATTTGGAAATCGTTAAGAGTGGTGCACAGTACGATCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGGAAGATATCGCCGTCGGAGCTGAGGAATCGGCTGGGATTGATTGGAGGAGAGCTGCAGCAGGCGGAGGCTGAGGCGGCGGTGGAATCGCTGGACTCGGACGGGGATGGTTTGCTGTGTGTGGGGGATATCGAACGGTTACTGGAGGTTGGGGAGGAAGAGAAGTTGAAGGATTTGAAGGAGGCGTTTGCTCTGTATGATAGTGAAGGTTGCGGGTTCATAACTCCCAAGAACTTGAAGAAAATGCTTAGGAAATTAGGGGAGAGGAAATCGACGGAGGAGTGTAAAATGATGATTCGTCGCTTTGATTTGAACGGTGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCTTAG

Protein sequence

MWAHFFTKPPLLGYYWARPGPHNKHILLRHKEDTWFTCVEQKNENVLNTDLEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDLNGDGLISFEEFQIMMA*

Homology

[Close]

BLAST of CsaV3_1G000650 vs. NCBI nr
Match: KAE8652382.1 (hypothetical protein Csa_014061 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MWAHFFTKPPLLGYYWARPGPHNKHILLRHKEDTWFTCVEQKNENVLNTDLEIVKSGAQY 60
           MWAHFFTKPPLLGYYWARPGPHNKHILLRHKEDTWFTCVEQKNENVLNTDLEIVKSGAQY
Sbjct: 1   MWAHFFTKPPLLGYYWARPGPHNKHILLRHKEDTWFTCVEQKNENVLNTDLEIVKSGAQY 60

Query: 61  DRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIERLL 120
           DRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIERLL
Sbjct: 61  DRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIERLL 120

Query: 121 EVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDLNGDG 180
           EVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDLNGDG
Sbjct: 121 EVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDLNGDG 180

Query: 181 LISFEEFQIMMA 193
           LISFEEFQIMMA
Sbjct: 181 LISFEEFQIMMA 192

[Close]

BLAST of CsaV3_1G000650 vs. NCBI nr
Match: XP_004138054.1 (putative calcium-binding protein CML19 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 8.9e-72
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 51  LEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 110
           +EIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL
Sbjct: 1   MEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 60

Query: 111 LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 170
           LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM
Sbjct: 61  LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 171 IRRFDLNGDGLISFEEFQIMMA 193
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of CsaV3_1G000650 vs. NCBI nr
Match: XP_008464450.1 (PREDICTED: putative calcium-binding protein CML19 [Cucumis melo] >KAA0057778.1 putative calcium-binding protein CML19 [Cucumis melo var. makuwa] >TYJ98459.1 putative calcium-binding protein CML19 [Cucumis melo var. makuwa])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 51  LEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 110
           +EI KSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGEL QAEAEAAVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 111 LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 170
           LC GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 171 IRRFDLNGDGLISFEEFQIMMA 193
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of CsaV3_1G000650 vs. NCBI nr
Match: XP_038879778.1 (putative calcium-binding protein CML19 [Benincasa hispida])

HSP 1 Score: 260.8 bits (665), Expect = 9.5e-66
Identity = 131/148 (88.51%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 46  VLNTDLEI-VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLD 105
           +L + +E+ +   AQYDRVLSYFDEDGDGKISPSELRNRLGL+GGEL QAEAEAAVESLD
Sbjct: 25  ILQSRIEMEINCAAQYDRVLSYFDEDGDGKISPSELRNRLGLMGGELLQAEAEAAVESLD 84

Query: 106 SDGDGLLCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKST 165
           SDGDGLLC GD ERLLEVGEEEKLKDLKEAFALYD EGCGFITPKNLKKMLRKLGERKST
Sbjct: 85  SDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDCEGCGFITPKNLKKMLRKLGERKST 144

Query: 166 EECKMMIRRFDLNGDGLISFEEFQIMMA 193
           EECK+MIRRFDLNGDGLISFEEFQIMMA
Sbjct: 145 EECKLMIRRFDLNGDGLISFEEFQIMMA 172

[Close]

BLAST of CsaV3_1G000650 vs. NCBI nr
Match: XP_022925940.1 (putative calcium-binding protein CML19 [Cucurbita moschata])

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-61
Identity = 122/139 (87.77%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 54  VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 113
           + S A YDRVL YFDEDGDGKISPSELRNRLGLIGGEL  AEAEAAVESLDSDGDGLLCV
Sbjct: 3   ITSAAHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCV 62

Query: 114 GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 173
           GDIERLL+VGEEEKLKDL+EAF LYD+EGCGFITPK+LK+ML+KLGE KST ECK+MIRR
Sbjct: 63  GDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 122

Query: 174 FDLNGDGLISFEEFQIMMA 193
           FDLNGDGLISFEEFQIMMA
Sbjct: 123 FDLNGDGLISFEEFQIMMA 141

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy Swiss-Prot
Match: Q8RYJ8 (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.7e-30
Identity = 75/144 (52.08%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 53  IVKSGAQYDRVLSYFDEDGDGKISPSELRNRL-GLIGGELQQAEAEAAVESLDSDGDGLL 112
           +V + A++ RV S FD D DGKIS +ELR  +   +G ++   EAEA V S D+D DGLL
Sbjct: 1   MVAATAEFRRVFSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLL 60

Query: 113 CVGDIERL---LEVG-EEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEEC 172
              +  +L   LE+G EEE+ + L EAF +Y+ EG G ITP +LK+ML KLG  +  EEC
Sbjct: 61  DEEEFTKLAVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEEC 120

Query: 173 KMMIRRFDLNGDGLISFEEFQIMM 192
           + MI RFDL+GDG+ISFEEF+IMM
Sbjct: 121 QTMICRFDLDGDGVISFEEFKIMM 144

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28
Identity = 65/134 (48.51%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 59  QYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIER 118
           + + V SY D + DG+ISP EL+     +G +L   EA AAV   D+DGDG+L   +  +
Sbjct: 43  ELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQ 102

Query: 119 LLEV-GEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDLN 178
           L++V  EEEK  +LK AF LY +EG   ITP++LK ML+KLGE ++T++C++MI  FDLN
Sbjct: 103 LIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLN 162

Query: 179 GDGLISFEEFQIMM 192
            DG++SF+EF +MM
Sbjct: 163 ADGVLSFDEFALMM 176

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy Swiss-Prot
Match: Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-27
Identity = 65/142 (45.77%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 56  SGAQYDRVLSYFDEDGDGKISPSELRNRL-GLIGGELQQAEAEAAVESLDSDGDGLLCVG 115
           S  +   + + FD DGDG+IS +ELR  +   +G E+   EA   V S+D+DGDGLLC  
Sbjct: 8   SPCESSALFATFDHDGDGRISAAELRLCMKTTLGEEVSDEEAGQLVASVDADGDGLLCEA 67

Query: 116 DIERLLEVGEEEKLKD-----LKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKM 175
           +  RL++  E E+  +     L+EAF +Y+ EG G ITP +L++MLR+LG  +  ++C+ 
Sbjct: 68  EFVRLVQAAEVEEEDERRGTGLREAFGMYEMEGEGCITPTSLRRMLRRLGSDQDIDDCRA 127

Query: 176 MIRRFDLNGDGLISFEEFQIMM 192
           MI RFDLNGDG++SF+EF+IMM
Sbjct: 128 MICRFDLNGDGVLSFDEFKIMM 149

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy Swiss-Prot
Match: Q9SRE7 (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-26
Identity = 61/135 (45.19%), Postives = 90/135 (66.67%), Query Frame = 0


Query: 61  DRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIERLL 120
           + V +Y D + DG+IS  EL+     +G ++   EAEAAV+  D DGDG+L + +   L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 121 ----EVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDL 180
               E  EEEK + + EAF +Y ++G   ITP +LK ML KLGE ++T++CK+MI+ FDL
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDL 143

Query: 181 NGDGLISFEEFQIMM 192
           N DG++SF+EF +MM
Sbjct: 144 NADGVLSFDEFALMM 158

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy Swiss-Prot
Match: Q2QYW1 (Probable calcium-binding protein CML25/26 OS=Oryza sativa subsp. japonica OX=39947 GN=CML25 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.5e-25
Identity = 66/139 (47.48%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 63  VLSYFDEDGDGKISPSELRNRL-GLIGGELQQAEAEAAVESLDSDGDGLLCVGDIERL-- 122
           V + FD+DGDGK+S SELR  +   +G E+ + EA A + + D+DGDGLL   +  RL  
Sbjct: 8   VFAAFDKDGDGKVSASELRGCMAAALGEEVSEEEAAAILATADTDGDGLLDHHEFMRLSA 67

Query: 123 ---LEVGEEEKLKDLKEAFALY-DSEGCGFITPKNLKKMLRKLG---ERKSTEECKMMIR 182
              L+   EE L+ L+EAF +Y + E    ITP +L++MLR+LG   +R   EEC+ MI 
Sbjct: 68  AHQLQEPAEESLRCLREAFDMYAEEEETAVITPASLRRMLRRLGSEHQRLEMEECRAMIC 127

Query: 183 RFDLNGDGLISFEEFQIMM 192
           RFDLNGDG++SF+EF++MM
Sbjct: 128 RFDLNGDGVLSFDEFRVMM 146

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy TrEMBL
Match: A0A0A0LU40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002110 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.3e-72
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 51  LEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 110
           +EIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL
Sbjct: 1   MEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 60

Query: 111 LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 170
           LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM
Sbjct: 61  LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 171 IRRFDLNGDGLISFEEFQIMMA 193
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy TrEMBL
Match: A0A5A7URJ2 (Putative calcium-binding protein CML19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00610 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.3e-70
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 51  LEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 110
           +EI KSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGEL QAEAEAAVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 111 LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 170
           LC GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 171 IRRFDLNGDGLISFEEFQIMMA 193
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy TrEMBL
Match: A0A1S3CN12 (putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103502330 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.3e-70
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 51  LEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 110
           +EI KSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGEL QAEAEAAVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 111 LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 170
           LC GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 171 IRRFDLNGDGLISFEEFQIMMA 193
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy TrEMBL
Match: A0A6J1EJM6 (putative calcium-binding protein CML19 OS=Cucurbita moschata OX=3662 GN=LOC111433200 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 5.3e-62
Identity = 122/139 (87.77%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 54  VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 113
           + S A YDRVL YFDEDGDGKISPSELRNRLGLIGGEL  AEAEAAVESLDSDGDGLLCV
Sbjct: 3   ITSAAHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCV 62

Query: 114 GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 173
           GDIERLL+VGEEEKLKDL+EAF LYD+EGCGFITPK+LK+ML+KLGE KST ECK+MIRR
Sbjct: 63  GDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 122

Query: 174 FDLNGDGLISFEEFQIMMA 193
           FDLNGDGLISFEEFQIMMA
Sbjct: 123 FDLNGDGLISFEEFQIMMA 141

[Close]

BLAST of CsaV3_1G000650 vs. ExPASy TrEMBL
Match: A0A6J1HRH8 (probable calcium-binding protein CML31 OS=Cucurbita maxima OX=3661 GN=LOC111466049 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 121/139 (87.05%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 54  VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 113
           + S A YDRVL YFDEDGDGKISPSELRNRLGLIGGEL  AEAEAAVESLDSDGDGLLCV
Sbjct: 3   ITSAAHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCV 62

Query: 114 GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 173
           GDIERLL+VGEEEKLKDL+EAF LYD+EGCGFITPK+LK+ML+KLGE KST ECK+MIRR
Sbjct: 63  GDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 122

Query: 174 FDLNGDGLISFEEFQIMMA 193
           FDLNGDGLISF+EFQIMMA
Sbjct: 123 FDLNGDGLISFDEFQIMMA 141

[Close]

BLAST of CsaV3_1G000650 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 65/134 (48.51%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 59  QYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIER 118
           + + V SY D + DG+ISP EL+     +G +L   EA AAV   D+DGDG+L   +  +
Sbjct: 43  ELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQ 102

Query: 119 LLEV-GEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDLN 178
           L++V  EEEK  +LK AF LY +EG   ITP++LK ML+KLGE ++T++C++MI  FDLN
Sbjct: 103 LIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLN 162

Query: 179 GDGLISFEEFQIMM 192
            DG++SF+EF +MM
Sbjct: 163 ADGVLSFDEFALMM 176

[Close]

BLAST of CsaV3_1G000650 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 65/134 (48.51%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 59  QYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIER 118
           + + V SY D + DG+ISP EL+     +G +L   EA AAV   D+DGDG+L   +  +
Sbjct: 43  ELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQ 102

Query: 119 LLEV-GEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDLN 178
           L++V  EEEK  +LK AF LY +EG   ITP++LK ML+KLGE ++T++C++MI  FDLN
Sbjct: 103 LIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLN 162

Query: 179 GDGLISFEEFQIMM 192
            DG++SF+EF +MM
Sbjct: 163 ADGVLSFDEFALMM 176

[Close]

BLAST of CsaV3_1G000650 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-27
Identity = 61/135 (45.19%), Postives = 90/135 (66.67%), Query Frame = 0


Query: 61  DRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIERLL 120
           + V +Y D + DG+IS  EL+     +G ++   EAEAAV+  D DGDG+L + +   L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 121 ----EVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDL 180
               E  EEEK + + EAF +Y ++G   ITP +LK ML KLGE ++T++CK+MI+ FDL
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDL 143

Query: 181 NGDGLISFEEFQIMM 192
           N DG++SF+EF +MM
Sbjct: 144 NADGVLSFDEFALMM 158

[Close]

BLAST of CsaV3_1G000650 vs. TAIR 10
Match: AT1G76650.2 (calmodulin-like 38 )

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-25
Identity = 60/134 (44.78%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 59  QYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIER 118
           + + V SY D + DG+ISP EL+     +G +L            D+DGDG+L   +  +
Sbjct: 43  ELEAVFSYMDANRDGRISPEELQKSFMTLGEQLLS----------DTDGDGMLDFEEFSQ 102

Query: 119 LLEV-GEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDLN 178
           L++V  EEEK  +LK AF LY +EG   ITP++LK ML+KLGE ++T++C++MI  FDLN
Sbjct: 103 LIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLN 162

Query: 179 GDGLISFEEFQIMM 192
            DG++SF+EF +MM
Sbjct: 163 ADGVLSFDEFALMM 166

[Close]

BLAST of CsaV3_1G000650 vs. TAIR 10
Match: AT5G42380.1 (calmodulin like 37 )

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-25
Identity = 59/132 (44.70%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 63  VLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCVGDIERLLE- 122
           V  Y D + DGKIS  EL++ + L+GG L   E E  V++ D DGDG +   +  +L+E 
Sbjct: 53  VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112

Query: 123 --VGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRRFDLNGD 182
               +EE+ K+LKEAF +Y  EG  FIT  +L++ L +LGE  + + CK+MIR FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172

Query: 183 GLISFEEFQIMM 192
           G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184

The following BLAST results are available for this feature:

BLAST of CsaV3_1G000650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652382.1	1.5e-106	100.00	hypothetical protein Csa_014061 [Cucumis sativus]	[more]
XP_004138054.1	8.9e-72	99.30	putative calcium-binding protein CML19 [Cucumis sativus]	[more]
XP_008464450.1	1.1e-69	97.18	PREDICTED: putative calcium-binding protein CML19 [Cucumis melo] >KAA0057778.1 p...	[more]
XP_038879778.1	9.5e-66	88.51	putative calcium-binding protein CML19 [Benincasa hispida]	[more]
XP_022925940.1	1.1e-61	87.77	putative calcium-binding protein CML19 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G000650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RYJ8	8.7e-30	52.08	Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9SRE6	1.7e-28	48.51	Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1	[more]
Q8RYK0	1.4e-27	45.77	Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9SRE7	2.0e-26	45.19	Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1	[more]
Q2QYW1	8.5e-25	47.48	Probable calcium-binding protein CML25/26 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of CsaV3_1G000650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU40	4.3e-72	99.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002110 PE=4 SV=1	[more]
A0A5A7URJ2	5.3e-70	97.18	Putative calcium-binding protein CML19 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CN12	5.3e-70	97.18	putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103502330 P...	[more]
A0A6J1EJM6	5.3e-62	87.77	putative calcium-binding protein CML19 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1HRH8	1.2e-61	87.05	probable calcium-binding protein CML31 OS=Cucurbita maxima OX=3661 GN=LOC1114660...	[more]

BLAST of CsaV3_1G000650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76650.1	1.2e-29	48.51	calmodulin-like 38	[more]
AT1G76650.3	1.2e-29	48.51	calmodulin-like 38	[more]
AT1G76640.1	1.4e-27	45.19	Calcium-binding EF-hand family protein	[more]
AT1G76650.2	1.8e-25	44.78	calmodulin-like 38	[more]
AT5G42380.1	1.8e-25	44.70	calmodulin like 37	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 59..87 e-value: 0.15 score: 21.1 coord: 130..158 e-value: 0.039 score: 23.1 coord: 166..192 e-value: 0.037 score: 23.2
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 129..191 e-value: 1.2E-14 score: 54.4
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 63..82 e-value: 2.6E-5 score: 23.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 55..90 score: 11.695971
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 126..161 score: 12.895472
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 162..192 score: 14.178661
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 130..192 e-value: 7.82939E-18 score: 71.8101
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 59..109 e-value: 4.79988E-8 score: 46.0017
None	No IPR available	GENE3D	1.10.238.10		coord: 21..119 e-value: 7.0E-11 score: 44.3
None	No IPR available	GENE3D	1.10.238.10		coord: 120..192 e-value: 1.2E-22 score: 82.0
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 56..192
None	No IPR available	PANTHER	PTHR10891:SF870	EF HAND CALCIUM-BINDING FAMILY PROTEIN	coord: 56..192
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 175..187
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 68..80
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 60..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G000650.1	CsaV3_1G000650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding