CsaV3_1G000370 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000370
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 228052 .. 228721 (-)
RNA-Seq ExpressionCsaV3_1G000370
SyntenyCsaV3_1G000370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTTGTGGTGACCGGAGCAGCTTGCTTGGTCCATAGCTATCCCCTTGCTGTGCGTCTCACCATCAGCTCACATGAAACTCAGAGACCGTACGGGTCGGCAGAGGTGTGCTGTCTTTTGGAGGCTGAAGCTGACTACTCCATCGATTGGAAACTGGTTTTTGACATCTCTGGCGCTTCCAACTTTGTTGCTCAGGTTTTCCAACAATTCCTTCCTTTTGTTGTAAAGTTAAGTCATAACTGTGATTTTAATTTTTGGATTTAATTAAAGTATACCTCGTATCACTTAATTATATACACATCACACTCAATATTTAGAGATTGATTTTCTGGTGTGCTATCATGATTACTTTTGTTTACTGCTCTTTTATCCTTAATCTTGCAATAATGTCTCAGGTGACTAAGTTTAAATGTAGTGAGTTCGTGGTTGGTTGGACTATGCGTGAACCACAGTGTCGTTGATGGGGTCGGGGCTATGGACGAGTTTGTGAATTTGTGGGGTGAAACTTCGGGGAGCTTGCCTTTTTACCGTTTCTTGATAGGAACATTATCTAAGCTCAAGACCTAAGGAGGGCCGCACAGCAGTACGATTGCGTCCTGATAAAGCAAAGCTCCTATTAGCAGGGATTTTGGGTGGGGGGACAACCCCGTGTTTTCAATACCGGTGA

mRNA sequence

ATGACTTTTGTGGTGACCGGAGCAGCTTGCTTGGTCCATAGCTATCCCCTTGCTGTGCGTCTCACCATCAGCTCACATGAAACTCAGAGACCGTACGGGTCGGCAGAGGTGTGCTGTCTTTTGGAGGCTGAAGCTGACTACTCCATCGATTGGAAACTGGTTTTTGACATCTCTGGCGCTTCCAACTTTGTTGCTCAGGAACATTATCTAAGCTCAAGACCTAAGGAGGGCCGCACAGCAGTACGATTGCGTCCTGATAAAGCAAAGCTCCTATTAGCAGGGATTTTGGGTGGGGGGACAACCCCGTGTTTTCAATACCGGTGA

Coding sequence (CDS)

ATGACTTTTGTGGTGACCGGAGCAGCTTGCTTGGTCCATAGCTATCCCCTTGCTGTGCGTCTCACCATCAGCTCACATGAAACTCAGAGACCGTACGGGTCGGCAGAGGTGTGCTGTCTTTTGGAGGCTGAAGCTGACTACTCCATCGATTGGAAACTGGTTTTTGACATCTCTGGCGCTTCCAACTTTGTTGCTCAGGAACATTATCTAAGCTCAAGACCTAAGGAGGGCCGCACAGCAGTACGATTGCGTCCTGATAAAGCAAAGCTCCTATTAGCAGGGATTTTGGGTGGGGGGACAACCCCGTGTTTTCAATACCGGTGA

Protein sequence

MTFVVTGAACLVHSYPLAVRLTISSHETQRPYGSAEVCCLLEAEADYSIDWKLVFDISGASNFVAQEHYLSSRPKEGRTAVRLRPDKAKLLLAGILGGGTTPCFQYR*
Homology
[Close]
BLAST of CsaV3_1G000370 vs. NCBI nr
Match: KGN63465.1 (hypothetical protein Csa_014175 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 2.7e-54
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MTFVVTGAACLVHSYPLAVRLTISSHETQRPYGSAEVCCLLEAEADYSIDWKLVFDISGA 60
           MTFVVTGAACLVHSYPLAVRLTISSHETQRPYGSAEVCCLLEAEADYSIDWKLVFDISGA
Sbjct: 1   MTFVVTGAACLVHSYPLAVRLTISSHETQRPYGSAEVCCLLEAEADYSIDWKLVFDISGA 60

Query: 61  SNFVAQEHYLSSRPKEGRTAVRLRPDKAKLLLAGILGGGTTPCFQYR 108
           SNFVAQEHYLSSRPKEGRTAVRLRPDKAKLLLAGILGGGTTPCFQYR
Sbjct: 61  SNFVAQEHYLSSRPKEGRTAVRLRPDKAKLLLAGILGGGTTPCFQYR 107

[Close]
BLAST of CsaV3_1G000370 vs. ExPASy TrEMBL
Match: A0A0A0LNI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001370 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.3e-54
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MTFVVTGAACLVHSYPLAVRLTISSHETQRPYGSAEVCCLLEAEADYSIDWKLVFDISGA 60
           MTFVVTGAACLVHSYPLAVRLTISSHETQRPYGSAEVCCLLEAEADYSIDWKLVFDISGA
Sbjct: 1   MTFVVTGAACLVHSYPLAVRLTISSHETQRPYGSAEVCCLLEAEADYSIDWKLVFDISGA 60

Query: 61  SNFVAQEHYLSSRPKEGRTAVRLRPDKAKLLLAGILGGGTTPCFQYR 108
           SNFVAQEHYLSSRPKEGRTAVRLRPDKAKLLLAGILGGGTTPCFQYR
Sbjct: 61  SNFVAQEHYLSSRPKEGRTAVRLRPDKAKLLLAGILGGGTTPCFQYR 107

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000370 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63465.12.7e-54100.00hypothetical protein Csa_014175 [Cucumis sativus][more]
BLAST of CsaV3_1G000370 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G000370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNI61.3e-54100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001370 PE=4 SV=1[more]
BLAST of CsaV3_1G000370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000370.1CsaV3_1G000370.1mRNA