CsaV3_1G000160 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G000160
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Acyl carrier protein
Location	chr1: 121467 .. 123328 (-)
RNA-Seq Expression	CsaV3_1G000160
Synteny	CsaV3_1G000160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGATTTTAGTGTTACATTTTAGACTGTAGAACCAATAATATAGTTTGTGGAGCAGACAAGTTCTTAATATAGTTTGAAAAATGTTTATATATATATATTTGTAAGAAAAGTGTTTTTAAAAAGTTGGTTGAAAGAATTTGGGTAAGGAAATCGGGCATGTAGATAGGATTTGATAAAAATGGATAATATGGAGGGAGAAGCAATGTCCACCACTCATCAAAACCAGTAAAACTACTTAATCCAATCCCTTCTTCATCTTCCTATCCTCCATGTTTCTGGGGTTTTGAAGTTTATTATACAAACGTAACTACACCCTCATTATTCAGTGGTAATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGGTGTTCTTTCTATCCTATCTATCTATTGTATATACAATTCTGTAGCCTAAAATGGTTCTTTATATATCATTAATTAACTGTATGCTGCTGCTTGCAGCTTCTCAGAAGAAGCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGTAATTTAACTCGAAGTGTCTCTAAACTAATTTGTGAATTTGAGTTTCAAACTAATTAAGTGTATGAACAGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTACGTCCTCTTATCCTTACTTAATTTAACTACCATTCTGTTCATTGCTTGAATATATATATGTGTGTGTGTGTCGGAATGGCCACACAGGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAAAAGACTATATATAGCTTTGCTTTTAGTATTATGTTGAAGTTGTATTATTCCAAGAGGCAGATGACAAGAGTTTGGTTGGGGTTGGGTTGAGCAAATAGGATTAGAATGTTCTTTTTTTCCTCAAATGATTTTTTTAAGCAAATTAATGTACTTCTACTCCATCAACGTAACTTGTTAGCTACAAAATTTAAAATGTAATATGAATTGTAGTGTTGTGTTGTTTTCTGTTCTCTAAACGAGGAGAGGATCGATCAGTCTATTTCAGTGATTCCAGTGGAGACGAAACTACAGTAGATAGTACTATTAGCCATTCAGTTTCTTTTTAAAAATAAAGCTCTCGAACTTTTTTCCCTCGAAAAGGGAAGGGAGAAAAAACCAATGGAAAGAGATGGGTTTTCAAAACTACTTTTATACTAATTATAATTTATGATTAAGTGGGCTCCATCTGAGAACACAAGTAACCCAATTTAATGGAGGGTTTGTTTTTGAAGACCAAAGTAGTTAGCCTCAGGTAACAAGACACACTATCACTTCAGCACAGAGTGATTGTAGATATGAAAACTCAATTTCTAAAGTTCAAATGCTGGGGAAATTAATGTTTCTGTTTTAAGAACAAACGCATATAAGTTAAGTGAGTTGCATAATGAGAAGCATGGTTATGAAAATGATACCTGTCATCTCTTTATGTTATGGTTTTGTTGCTTTATTTAGATACCGCCATAATTTATGCAAAGCAGCGAAACCCCACTGGCTCTGCGCTCACACACTTGCACCTTTTCAACAGTGGTCCAAAGGCCCACATATTGTAACTTGTAAGCTCTCCATCCATACAATCCATACTTCACAAGAGAGAGAGAGAGAGAGAGAAG

mRNA sequence

ATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGCTTCTCAGAAGAAGCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAA

Coding sequence (CDS)

ATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGCTTCTCAGAAGAAGCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAA

Protein sequence

MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQQS*

Homology

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BLAST of CsaV3_1G000160 vs. NCBI nr
Match: XP_004138024.1 (acyl carrier protein 4, chloroplastic [Cucumis sativus] >KGN63443.1 hypothetical protein Csa_013588 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 4.7e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIENLVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

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BLAST of CsaV3_1G000160 vs. NCBI nr
Match: XP_008464386.1 (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl carrier protein [Cucumis melo subsp. melo])

HSP 1 Score: 237.7 bits (605), Expect = 6.0e-59
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRRS  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

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BLAST of CsaV3_1G000160 vs. NCBI nr
Match: XP_038879812.1 (acyl carrier protein 4, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55
Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS SATSLRFCMP+NQ  KMNHNQLLR S +GRG L NNNAFH RVSCAAKPET+DKVC
Sbjct: 3   MASISATSLRFCMPLNQPTKMNHNQLLRTSSIGRGLL-NNNAFHLRVSCAAKPETVDKVC 62

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPE+SELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 63  SIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 122

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 123 ADLIEDLVVKQQS 134

[Close]

BLAST of CsaV3_1G000160 vs. NCBI nr
Match: KAG6589346.1 (Acyl carrier protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023033.1 Acyl carrier protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.0 bits (502), Expect = 5.3e-47
Identity = 110/142 (77.46%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAF----------HFRVSCA 60
           MASFS+T LRF +P+NQA K N NQ+LRRS  G G L  +N F          H RVSCA
Sbjct: 3   MASFSSTCLRFRIPLNQAAKTNQNQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVSCA 62

Query: 61  AKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDN 120
           AKPET+DKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEEDN
Sbjct: 63  AKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEEDN 122

Query: 121 AQNITTVQEAADLIENLVVKQQ 133
           AQNITTVQEAADLIE+LVVKQQ
Sbjct: 123 AQNITTVQEAADLIEDLVVKQQ 144

[Close]

BLAST of CsaV3_1G000160 vs. NCBI nr
Match: XP_022987144.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 194.5 bits (493), Expect = 5.8e-46
Identity = 111/145 (76.55%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHN--QLLRRSLLGRGFLNNNNAF----------HFRVS 60
           MASFS+T LRF +P+NQA K N N  Q+LRRS  G G L  +N F          H RVS
Sbjct: 3   MASFSSTCLRFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFHLVTHRTSQSHLRVS 62

Query: 61  CAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120
           CAAKPET+DKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122

Query: 121 DNAQNITTVQEAADLIENLVVKQQS 134
           DNAQNITTVQEAADLIE+LVVKQQS
Sbjct: 123 DNAQNITTVQEAADLIEDLVVKQQS 147

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BLAST of CsaV3_1G000160 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-27
Identity = 62/87 (71.26%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 45  FRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSI 104
           F V CAAKPET++KVC+IV+KQLALP+ S +T ESKFA LGADSLDTVEI+M LEEEF I
Sbjct: 48  FVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGI 107

Query: 105 NIEEDNAQNITTVQEAADLIENLVVKQ 132
           N+EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 108 NVEEESAQSIATVQDAADLIEKLIEKK 134

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BLAST of CsaV3_1G000160 vs. ExPASy Swiss-Prot
Match: Q9SW21 (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-27
Identity = 69/131 (52.67%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS S TSL F  P    +++       +S+    F ++  +   ++SCAAK ET+ KV 
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
            IV++QLAL     LT ESKF+ALGADSLDTVEI+M LEE+F+I++EE +AQNITT+QEA
Sbjct: 61  DIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNITTIQEA 120

Query: 121 ADLIENLVVKQ 132
           ADLIE+LV K+
Sbjct: 121 ADLIEDLVQKK 131

[Close]

BLAST of CsaV3_1G000160 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26
Identity = 60/98 (61.22%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 34  RGFLNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVE 93
           + F +   +F  RV+C AKPET+ KVC+IV+KQLALP+ S+++  SKF+ALGADSLDTVE
Sbjct: 38  KSFFSRRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVE 97

Query: 94  IIMTLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
           I+M LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 98  IVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 135

[Close]

BLAST of CsaV3_1G000160 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.0e-26
Identity = 61/94 (64.89%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 38  NNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMT 97
           ++ ++F  RVSC AKPET+ KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M 
Sbjct: 45  SSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMG 104

Query: 98  LEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
           LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 105 LEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 138

[Close]

BLAST of CsaV3_1G000160 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.9e-25
Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 37  LNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIM 96
           L ++     RVSC AKPET+ KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M
Sbjct: 43  LRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVM 102

Query: 97  TLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
            LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 103 GLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 137

[Close]

BLAST of CsaV3_1G000160 vs. ExPASy TrEMBL
Match: A0A0A0LNR6 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIENLVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

[Close]

BLAST of CsaV3_1G000160 vs. ExPASy TrEMBL
Match: E5GBM2 (Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.9e-59
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRRS  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]

BLAST of CsaV3_1G000160 vs. ExPASy TrEMBL
Match: A0A1S3CLC5 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.9e-59
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRRS  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]

BLAST of CsaV3_1G000160 vs. ExPASy TrEMBL
Match: A0A6J1JI20 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111484784 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46
Identity = 111/145 (76.55%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHN--QLLRRSLLGRGFLNNNNAF----------HFRVS 60
           MASFS+T LRF +P+NQA K N N  Q+LRRS  G G L  +N F          H RVS
Sbjct: 3   MASFSSTCLRFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFHLVTHRTSQSHLRVS 62

Query: 61  CAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120
           CAAKPET+DKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122

Query: 121 DNAQNITTVQEAADLIENLVVKQQS 134
           DNAQNITTVQEAADLIE+LVVKQQS
Sbjct: 123 DNAQNITTVQEAADLIEDLVVKQQS 147

[Close]

BLAST of CsaV3_1G000160 vs. ExPASy TrEMBL
Match: A0A6J1E6C1 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111429833 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.8e-45
Identity = 110/145 (75.86%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHN--QLLRRSLLGRGFLNNNNAF----------HFRVS 60
           MASFS+T L F +P+NQA K N N  Q+LRRS  G G L  +N F          H RVS
Sbjct: 3   MASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVS 62

Query: 61  CAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120
           CAAKPET+DKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122

Query: 121 DNAQNITTVQEAADLIENLVVKQQS 134
           DNAQNITTVQEAADLIE+LVVKQQS
Sbjct: 123 DNAQNITTVQEAADLIEDLVVKQQS 147

[Close]

BLAST of CsaV3_1G000160 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 )

HSP 1 Score: 122.1 bits (305), Expect = 3.4e-28
Identity = 69/131 (52.67%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS S TSL F  P    +++       +S+    F ++  +   ++SCAAK ET+ KV 
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
            IV++QLAL     LT ESKF+ALGADSLDTVEI+M LEE+F+I++EE +AQNITT+QEA
Sbjct: 61  DIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNITTIQEA 120

Query: 121 ADLIENLVVKQ 132
           ADLIE+LV K+
Sbjct: 121 ADLIEDLVQKK 131

[Close]

BLAST of CsaV3_1G000160 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 0


Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS S TSL F  P    +++       +S+    F ++  +   ++SCAAK ET+ KV 
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDT------------VEIIMTLEEEFSINIEE 120
            IV++QLAL     LT ESKF+ALGADSLDT            VEI+M LEE+F+I++EE
Sbjct: 61  DIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKFNISVEE 120

Query: 121 DNAQNITTVQEAADLIENLVVKQ 132
            +AQNITT+QEAADLIE+LV K+
Sbjct: 121 SDAQNITTIQEAADLIEDLVQKK 143

[Close]

BLAST of CsaV3_1G000160 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 )

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-24
Identity = 56/85 (65.88%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 47  VSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 106
           VSCAAKPET+DKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I +
Sbjct: 50  VSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEM 109

Query: 107 EEDNAQNITTVQEAADLIENLVVKQ 132
            E+ AQ+I TV++AA LIE L+ ++
Sbjct: 110 AEEKAQSIATVEQAAALIEELLFEK 134

[Close]

BLAST of CsaV3_1G000160 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 )

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 47  VSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 106
           V CAAKPET+DKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I +
Sbjct: 50  VYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEM 109

Query: 107 EEDNAQNITTVQEAADLIENLVVKQ 132
            E+ AQ+I TV++AA LIE L++++
Sbjct: 110 AEEKAQSIATVEQAAALIEELLLEK 134

[Close]

BLAST of CsaV3_1G000160 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 )

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 63/127 (49.61%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 2   ASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVCS 61
           A FSAT+ RFC+   QA   N+ +    S   R  +    A    VSCA K ET++KV  
Sbjct: 13  APFSATTTRFCLN-KQATIFNNEKTNNLSFSLRRLMPARLA----VSCAVKQETVEKVSE 72

Query: 62  IVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAA 121
           IV+KQL+L +  ++T  +KF  LGADSLDTVEI+M LEEEF I + E+ A+ I TVQ+AA
Sbjct: 73  IVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGITMAEERAKEIATVQQAA 132

Query: 122 DLIENLV 129
           +LIE LV
Sbjct: 133 ELIEELV 134

The following BLAST results are available for this feature:

BLAST of CsaV3_1G000160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138024.1	4.7e-64	100.00	acyl carrier protein 4, chloroplastic [Cucumis sativus] >KGN63443.1 hypothetical...	[more]
XP_008464386.1	6.0e-59	93.23	PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl...	[more]
XP_038879812.1	1.8e-55	90.23	acyl carrier protein 4, chloroplastic-like [Benincasa hispida]	[more]
KAG6589346.1	5.3e-47	77.46	Acyl carrier protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022987144.1	5.8e-46	76.55	acyl carrier protein 4, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of CsaV3_1G000160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93092	3.7e-27	71.26	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
Q9SW21	4.8e-27	52.67	Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE...	[more]
P52412	1.8e-26	61.22	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]
P52411	7.0e-26	64.89	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
P52414	5.9e-25	64.21	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]

BLAST of CsaV3_1G000160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNR6	2.3e-64	100.00	Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1	[more]
E5GBM2	2.9e-59	93.23	Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3CLC5	2.9e-59	93.23	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1	[more]
A0A6J1JI20	2.8e-46	76.55	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111484784 PE=3 SV=1	[more]
A0A6J1E6C1	1.8e-45	75.86	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111429833 PE=3 SV=1	[more]

BLAST of CsaV3_1G000160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25050.1	3.4e-28	52.67	acyl carrier protein 4	[more]
AT4G25050.2	1.6e-25	48.25	acyl carrier protein 4	[more]
AT1G54580.1	1.0e-24	65.88	acyl carrier protein 2	[more]
AT1G54630.1	3.0e-24	64.71	acyl carrier protein 3	[more]
AT5G27200.1	1.1e-21	49.61	acyl carrier protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 51..131 e-value: 3.1E-25 score: 90.1
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 52..128
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 54..126 e-value: 7.6E-23 score: 78.2
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 54..128 score: 17.156244
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 57..124 e-value: 2.3E-12 score: 47.1
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 53..128 score: 21.333143
IPR044813	Acyl carrier protein, chloroplastic	PANTHER	PTHR46153	ACYL CARRIER PROTEIN	coord: 1..132
None	No IPR available	PANTHER	PTHR46153:SF7	ACYL CARRIER PROTEIN	coord: 1..132
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 83..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G000160.1	CsaV3_1G000160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
molecular_function	GO:0000036	acyl carrier activity