CsGy7G021690 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G021690
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNuclear pore complex protein NUP35
LocationGy14Chr7: 23702816 .. 23706510 (+)
RNA-Seq ExpressionCsGy7G021690
SyntenyCsGy7G021690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGTTCAAATAATATCACGAATCACGCTGTCAAACCGTATTCCCCACCGGAGGGAGTTGGGGTTTAGGGTTTCAAACTTTCAATTTTCAACCTTCTAAACCTTTTTAGGTCTTTTGTCGTCCACTTTGGGCGTCTCTGTTCCAAAATACTTTGGAGAGGGAAAAATCAAATTCCCAAGTCTCCTCGCCTCTCTAATTCTCTAATCCAATCGATCAGTTCGAAGCAGAGTTCGACCATTTTCTCAAGGTGATTCTCCTAATCTCTCCTCCATTTTCTCATTGCCTTTTCCAAGTTTTCTGCATTTCGTATACTTGAACTCCACTTTTGTGTTATTTGAACAATTGAATTAATATTTCCCAGCGGCTATGGACTTTTCGACCCAGTTGAACTATATAGTGTTTTAGCTGATCTATTGTTTCTTGATTTATTATAAAGTTCTAGATTGCTTCCTCAGAATTCGTATTTATTGGGTTTGTTCTGGAACCTTGATTCTCCCAACCCCCCCTGCATCTGTTAGTTCTTTAATCGAGCTCACACAGACTGTTTGGCGGTTTAATTATTAGAACTTAAACGTTCGTTTTTTCAAATTTGTTTTGTCGAAGGGAAATTTCATTTTATGTTCCTATGCAGTTGAGATATATCTTTCTTTGAAATCATGAATACCACTGTGCATAGAACTCCCAATTCTGGGAGCCGGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGAAAATTTTCAACTCCAGGCCAGGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCAGTTTTCACTTTGGAAGACCGCTCGGTTTCAGATTTTTCTCCCGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAACTAAATCAGACCCCAGGACCCCTATCCGAAGGCATGACTTCTCTTCGCCGACAAAAAACAAGTCAAATGCCAGCACTTCTTATACACCAATCAGTGGACAACAAAGCCGTCAGGGATCGGCTGGCTTTAGTTGGTGGTCAACATCGAAAGGTGGTGGGAGCGAGCAAGAAGATAAGGGAAAAAGTTCACCAGTCGAAGGTGTTATTCAACCTGGTGCATTAATCACACTTCCAACCCCGAGGGAAGTTGCCAGACCGGAGGTGCAAAGGAATTGCTTGCCTTTAGCAAAACTCAATGAAGAGGAATGGGTTACTGTCTATGGGTGAGTTCTTTATTTCCTTTCTTCCTTCTCACATCATCGTTAGCTGTGGTTTTTATCTTTGAATTTGAATGATTCATTTACCATCTTTGAGTTTTGCCTTATTGATTACATTTTTTTAATCTACATATTAAACAGCTAACCAATTTTCTTTTGAGTCATCTTAAAGTTCCCTAATCACGTTGTGGACGATCAAAGTGGTTTTCGTATGTATGATATGGTTTATGCAGCCTTGCCTTGTCATTTCTCTCAGATGAATCTTTCTCTTACATGCACCCACATTTCATTCCTGCACGCAAAAACATGCTCGCATATTGAATGTTGCTTCAAAATCAATTTGATATTAAACATCTTCAATTTGGAAGCGTTTTAAGCCTGTTCTTATAGCTTGCTTTCCTTCTTGTCGAAATGAATGAGCATGCGTCATTTGTTTGACATGGAAGGAAGTACCCTAGCTGCTTAGGTTTACCTCAGTGGCAATGCTGTGGTAATTTATTGCAGGCTGCATTTATATTAGTTTTGATACGGGATTACTTGAACAAGATTTATTCTATAGATTAACAACGGTGCCCTTGAGTTCTAAAGTGAGGTTGGTTTTGATAGAAGCAATTTAAATTGTTAGTGTTGAGTATTTGATAAGAAGCGATTCTGTTACTGATTCCAAATGTTATTTATTAATTATATTATTTATTAATTATATTATTTGTTGTTCTCTTTCTTCAGATTTTCCCCTGCTGATACAAATCTAGTTTTGAGGGAGTTTGAAAAATGCGGTGAGATCTTAAAACACCTTCCTGGTCCAAGAGACGCTAATTGGATGCACATTCTTTATCAGGTACCAATGCATCTCTGTTTCCTAGCTTTATTTGACTGGTTTTCTTGGTTTTATGTTCTTTTTGTTTTAGATTCTTCCAGTCAATCTGTTATTGTAAATCGGAATGGCTTTGTTGCTAGTTGTTAAATTTTGAAATCTTGTTAATTATGTATCAATTATTGTGAAAATAACAGCACAACATGTATTCATGGATGCTAGGAAAGGCATTAGGTTTGAAGTTCGTCATTGTTGTTTTTAGTTCAACGATATGGGGGTGGTGATACAAACATCTACCGTTTGGTTAGGGTTTAATTGATACCTATTGCATGTTTTGTTTGAATATTAACCTCATCAATCAAATTAATGCTTCATAATCAAGTCAAGACTTGACACTTTGACCAGTCGAAAGATACATATTACGTTGGGTATATGTAACTCATATAATATTCGTTTATGAGCAGGAAGACGCTATATTTCAACCTCTTAGAAATACTATTTACGTTATGAACATGTTTAATTTTGTTTCTGGTGCAGAACCGATCTGATGCTCAAAAGGCTCTCAATAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCAATGCATCGGCAAGCACTAGAAGAAAGATTAAACAATCCAGGATTCATGGTTATCCCACCGGTATCATCTCGAACCTCAGAACTCCTTGCAACGAGAGGACCCATGCGTCCCTACAATCTTCAAAATGGTTACACTAGTGCACGGCACTCAGGAGGTGCCATAGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAAGCTCCTCCTCTGTGGCAAGAAATTCCTTGAAATTTGAGAGCTTACACATTGATTTGACGTGATGTTATGGACTCCTATAACTGTGTGCAATGTTCACACTTCACCGTCCATCTTGATCTTTTGATTGTTTTTCCTGATTCTTACTCAAAATGAGACAGAAGGACATGAACATGATGCTAGAACATTTTTTGTTCCCTTGAAAACCAAACAAATATGAGAACCAGGTATATAAGTATATTTCCACTTCCCACCCTTTGAACTCTCCTCTTGCTGAACTTTTACAATAGGTTGAAATAACTCATTTCAAGCATGTGGGGTAACTTTGAGTTATTATAAATTATTAATGCATGCTACAACTCAACATTGTTACATGAGCAAATTTATTTGAGAAAATACTTATAATATTATAAAGAAAATTACTTGGATGTATACTATTATTTATGTGTAACTCATTCAAGAATCAAATTATCAATTGTCAAGTGACAAGTTTGAGATGATAGAAATATTGGAGTATTGGAGTATTGGAGATCATAGAAATATTGGAGTATTCAAGGAAACATGATTTCTAAATATATAAAAAGGAATTGCAGAAAGAAATAGATGAAGGAGAAGAAGATCAAAAAGTGTTATAGTGAAGTAGAGAGAATCAAGTGCTCAAATAGAGAAGATAGAGGAATCGAGTAGAGAGAGTATTGAGTCGGTTGTTTATTATCATTTTAGTAAATTTACTTGAAAACGATGTAAGCATATTGCTAAAAGACTTGAGTTTTCTTAAGAACGATGTAAGCATATTGCTAAAAGACTTGAGTTTTC

mRNA sequence

GGGGTTCAAATAATATCACGAATCACGCTGTCAAACCGTATTCCCCACCGGAGGGAGTTGGGGTTTAGGGTTTCAAACTTTCAATTTTCAACCTTCTAAACCTTTTTAGGTCTTTTGTCGTCCACTTTGGGCGTCTCTGTTCCAAAATACTTTGGAGAGGGAAAAATCAAATTCCCAAGTCTCCTCGCCTCTCTAATTCTCTAATCCAATCGATCAGTTCGAAGCAGAGTTCGACCATTTTCTCAAGGTGATTCTCCTAATCTCTCCTCCATTTTCTCATTGCCTTTTCCAAGTTTTCTGCATTTCGTATACTTGAACTCCACTTTTGTGTTATTTGAACAATTGAATTAATATTTCCCAGCGGCTATGGACTTTTCGACCCAGTTGAACTATATAGTGTTTTAGCTGATCTATTGTTTCTTGATTTATTATAAAGTTCTAGATTGCTTCCTCAGAATTCGTATTTATTGGGTTTGTTCTGGAACCTTGATTCTCCCAACCCCCCCTGCATCTGTTAGTTCTTTAATCGAGCTCACACAGACTGTTTGGCGGTTTAATTATTAGAACTTAAACGTTCGTTTTTTCAAATTTGTTTTGTCGAAGGGAAATTTCATTTTATGTTCCTATGCAGTTGAGATATATCTTTCTTTGAAATCATGAATACCACTGTGCATAGAACTCCCAATTCTGGGAGCCGGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGAAAATTTTCAACTCCAGGCCAGGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCAGTTTTCACTTTGGAAGACCGCTCGGTTTCAGATTTTTCTCCCGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAACTAAATCAGACCCCAGGACCCCTATCCGAAGGCATGACTTCTCTTCGCCGACAAAAAACAAGTCAAATGCCAGCACTTCTTATACACCAATCAGTGGACAACAAAGCCGTCAGGGATCGGCTGGCTTTAGTTGGTGGTCAACATCGAAAGGTGGTGGGAGCGAGCAAGAAGATAAGGGAAAAAGTTCACCAGTCGAAGGTGTTATTCAACCTGGTGCATTAATCACACTTCCAACCCCGAGGGAAGTTGCCAGACCGGAGGTGCAAAGGAATTGCTTGCCTTTAGCAAAACTCAATGAAGAGGAATGGGTTACTGTCTATGGATTTTCCCCTGCTGATACAAATCTAGTTTTGAGGGAGTTTGAAAAATGCGGTGAGATCTTAAAACACCTTCCTGGTCCAAGAGACGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCTCAAAAGGCTCTCAATAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCAATGCATCGGCAAGCACTAGAAGAAAGATTAAACAATCCAGGATTCATGGTTATCCCACCGGTATCATCTCGAACCTCAGAACTCCTTGCAACGAGAGGACCCATGCGTCCCTACAATCTTCAAAATGGTTACACTAGTGCACGGCACTCAGGAGGTGCCATAGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAAGCTCCTCCTCTGTGGCAAGAAATTCCTTGAAATTTGAGAGCTTACACATTGATTTGACGTGATGTTATGGACTCCTATAACTGTGTGCAATGTTCACACTTCACCGTCCATCTTGATCTTTTGATTGTTTTTCCTGATTCTTACTCAAAATGAGACAGAAGGACATGAACATGATGCTAGAACATTTTTTGTTCCCTTGAAAACCAAACAAATATGAGAACCAGGTATATAAGTATATTTCCACTTCCCACCCTTTGAACTCTCCTCTTGCTGAACTTTTACAATAGGTTGAAATAACTCATTTCAAGCATGTGGGGTAACTTTGAGTTATTATAAATTATTAATGCATGCTACAACTCAACATTGTTACATGAGCAAATTTATTTGAGAAAATACTTATAATATTATAAAGAAAATTACTTGGATGTATACTATTATTTATGTGTAACTCATTCAAGAATCAAATTATCAATTGTCAAGTGACAAGTTTGAGATGATAGAAATATTGGAGTATTGGAGTATTGGAGATCATAGAAATATTGGAGTATTCAAGGAAACATGATTTCTAAATATATAAAAAGGAATTGCAGAAAGAAATAGATGAAGGAGAAGAAGATCAAAAAGTGTTATAGTGAAGTAGAGAGAATCAAGTGCTCAAATAGAGAAGATAGAGGAATCGAGTAGAGAGAGTATTGAGTCGGTTGTTTATTATCATTTTAGTAAATTTACTTGAAAACGATGTAAGCATATTGCTAAAAGACTTGAGTTTTCTTAAGAACGATGTAAGCATATTGCTAAAAGACTTGAGTTTTC

Coding sequence (CDS)

ATGAATACCACTGTGCATAGAACTCCCAATTCTGGGAGCCGGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGAAAATTTTCAACTCCAGGCCAGGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCAGTTTTCACTTTGGAAGACCGCTCGGTTTCAGATTTTTCTCCCGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAACTAAATCAGACCCCAGGACCCCTATCCGAAGGCATGACTTCTCTTCGCCGACAAAAAACAAGTCAAATGCCAGCACTTCTTATACACCAATCAGTGGACAACAAAGCCGTCAGGGATCGGCTGGCTTTAGTTGGTGGTCAACATCGAAAGGTGGTGGGAGCGAGCAAGAAGATAAGGGAAAAAGTTCACCAGTCGAAGGTGTTATTCAACCTGGTGCATTAATCACACTTCCAACCCCGAGGGAAGTTGCCAGACCGGAGGTGCAAAGGAATTGCTTGCCTTTAGCAAAACTCAATGAAGAGGAATGGGTTACTGTCTATGGATTTTCCCCTGCTGATACAAATCTAGTTTTGAGGGAGTTTGAAAAATGCGGTGAGATCTTAAAACACCTTCCTGGTCCAAGAGACGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCTCAAAAGGCTCTCAATAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCAATGCATCGGCAAGCACTAGAAGAAAGATTAAACAATCCAGGATTCATGGTTATCCCACCGGTATCATCTCGAACCTCAGAACTCCTTGCAACGAGAGGACCCATGCGTCCCTACAATCTTCAAAATGGTTACACTAGTGCACGGCACTCAGGAGGTGCCATAGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

Protein sequence

MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLAKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQNGYTSARHSGGAIASPSKSLVSKVMDLMFGV*
Homology
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BLAST of CsGy7G021690 vs. ExPASy Swiss-Prot
Match: O04326 (Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 8.3e-121
Identity = 226/334 (67.66%), Postives = 261/334 (78.14%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+   HRTP SG +SL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRR--HDFSSPTKNKSNASTSYTPISGQ 120
           TL+DR  SDFSPESGI DY  SP+ KSD RTP +    +  +P K K  AS S++ ++ Q
Sbjct: 61  TLDDR--SDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQ 120

Query: 121 QSRQGSAGFSWWSTSKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCL 180
           QS+Q S   SWWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +
Sbjct: 121 QSQQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQII 180

Query: 181 PLAKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKA 240
           P   L+EEEWVTVYGFSP DTNLVLREFEKCG +LKH+PGPR+ANWMHILYQNRSDA KA
Sbjct: 181 PTGNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKA 240

Query: 241 LNKNGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYN 300
           LNK G+ INGV+IVGVKPVDP+ +QAL ERLNN GFM +PP SS  +     R   RP  
Sbjct: 241 LNKAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTRN---TARPLSRPQY 300

Query: 301 LQNGYT-SARHSGGAIASPSKSLVSKVMDLMFGV 331
           LQNG   S + SGGA+ASPSKS+VSK  DLMFGV
Sbjct: 301 LQNGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

[Close]
BLAST of CsGy7G021690 vs. ExPASy Swiss-Prot
Match: Q6P6X9 (Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.2e-16
Identity = 55/177 (31.07%), Postives = 91/177 (51.41%), Query Frame = 0 

Query: 160 TLPTPREVARPEVQRNCLPLAKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPR 219
           T  +P +V     Q + L      ++ W+TV+GF PA  + +L +F + G ILKH+    
Sbjct: 133 TTLSPAQVDPFFTQGDALSSEDQLDDTWITVFGFPPASASYILLQFAQYGNILKHVMS-N 192

Query: 220 DANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKP-VDPMHRQALEERLNNPGFMVIPP 279
             NWMH+ YQ++  A+KAL+K+G      +++GVKP +D    ++L++  +    +  PP
Sbjct: 193 TGNWMHVQYQSKLQARKALSKDGKIFGEAIMIGVKPCIDKSVMESLDKG-STSSSVFTPP 252

Query: 280 VS---SRTSELLATRGPMRPYNLQNGYTSARH---SGGAIASPSKSLVSKVMDLMFG 330
           V    + +  L   R  MRP +     +S+ +   S        +S VSK M+ MFG
Sbjct: 253 VKAPCTPSHPLSTPRSVMRPLSAAYKASSSDYQVVSDQQTPKKDESFVSKAMEYMFG 307

[Close]
BLAST of CsGy7G021690 vs. ExPASy Swiss-Prot
Match: Q8NFH5 (Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.7e-15
Identity = 98/341 (28.74%), Postives = 145/341 (42.52%), Query Frame = 0 

Query: 21  LASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSP-------- 80
           L SP + + G          V+A +   F   DLP P   T + RS+S  S         
Sbjct: 20  LGSPTSPKPG----------VNAQFLPGFLMGDLPAP--VTPQPRSISGPSVGVMEMRSP 79

Query: 81  --ESGIPDYPVSPETKSDPRTPIRR---HDFSSP--------TKNKSNASTSYTPISGQQ 140
               G P  PV P  K     P  R    D SSP        ++ + N S   +P+ G  
Sbjct: 80  LLAGGSPPQPVVPAHKDKSGAPPVRSIYDDISSPGLGSTPLTSRRQPNISVMQSPLVGVT 139

Query: 141 SRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPL 200
           S  G+ G S +S +  G           P +  + P  L    T         Q + L  
Sbjct: 140 STPGT-GQSMFSPASIG----------QPRKTTLSPAQLDPFYT---------QGDSLTS 199

Query: 201 AKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALN 260
               ++ WVTV+GF  A  + +L +F + G ILKH+      NWMHI YQ++  A+KAL+
Sbjct: 200 EDHLDDSWVTVFGFPQASASYILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALS 259

Query: 261 KNGIQINGVLIVGVKP-VDPMHRQALEE-RLNNPGFMVIPPVSSRTSELLATRGP----M 320
           K+G      +++GVKP +D    ++ +   L++P     PP+ +  +       P    M
Sbjct: 260 KDGRIFGESIMIGVKPCIDKSVMESSDRCALSSPSLAFTPPIKTLGTPTQPGSTPRISTM 319

Query: 321 RPYNLQNGYTSARHSGGAIA---SPSK--SLVSKVMDLMFG 330
           RP  L   Y ++      I+   +P K  SLVSK M+ MFG
Sbjct: 320 RP--LATAYKASTSDYQVISDRQTPKKDESLVSKAMEYMFG 325

[Close]
BLAST of CsGy7G021690 vs. ExPASy Swiss-Prot
Match: Q68FY1 (Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-13
Identity = 96/355 (27.04%), Postives = 143/355 (40.28%), Query Frame = 0 

Query: 7   RTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS 66
           + P  GS  +    L SP + + G           +A +   F   DLP P   T + RS
Sbjct: 9   QAPTLGSEPMM---LGSPTSPKPG----------ANAQFLPGFLMGDLPAP--VTPQPRS 68

Query: 67  VSDFSP----------ESGIPDYPVSPETKSDPRTPIRR---HDFSS--------PTKNK 126
           +S  S             G P  PV P  K     P  R    D SS        P++ +
Sbjct: 69  ISGPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAPPVRSIYDDISSPGLGSTPLPSRRQ 128

Query: 127 SNASTSYTPISGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPR 186
           +N S   +P+ G             +T   G S         P +  + P  L    T  
Sbjct: 129 ANISVLQSPLVGV------------TTPVTGQSMFSPANIGQPRKTTLSPAQLDPFYT-- 188

Query: 187 EVARPEVQRNCLPLAKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMH 246
                  Q + L      ++ WVTV+GF  A  + +L +F + G ILKH+      NWMH
Sbjct: 189 -------QGDSLTSEDHLDDTWVTVFGFPQASASYILLQFAQYGNILKHVMS-NTGNWMH 248

Query: 247 ILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALEER--LNNPGFMVIPPVSSRT 306
           I YQ++  A+KAL+K+G      +++GVKP    +     +R  L++P     PP+ +  
Sbjct: 249 IRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKNVMENSDRGVLSSPSLAFTPPIRTLG 308

Query: 307 SELLATRGP----MRPYNLQNGYTSARHSGGAIA---SPSK--SLVSKVMDLMFG 330
           +       P    MRP  L   Y ++      I+   +P K  SLVS+ M+ MFG
Sbjct: 309 TPTQPGSTPRVSTMRP--LATAYKASTSDYQVISDRQTPKKDESLVSRAMEYMFG 324

[Close]
BLAST of CsGy7G021690 vs. ExPASy Swiss-Prot
Match: Q66IJ0 (Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-13
Identity = 91/341 (26.69%), Postives = 147/341 (43.11%), Query Frame = 0 

Query: 9   PNSGSRSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLE 68
           P++G++ L      D+ +PV        TP Q  ++  +  R    +   PP PV  T +
Sbjct: 24  PSAGAQFLPGFLLGDIPTPV--------TPQQRPSIGVMEMRSPLLSGGSPPQPVVPTHK 83

Query: 69  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFS---SPTKNKSNASTSYTPISGQQS 128
           D+S +   P   I D   SP   S P  P +   FS   +P      +S     ISG + 
Sbjct: 84  DKSGA--PPVRSIYDDIASPGLGSTPLNPRKTASFSVLHTPLSGVIPSSPECKNISGSRK 143

Query: 129 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 188
           R  S+ F   S +  G S +                   T  +P ++     Q + L   
Sbjct: 144 RPASSVF---SPATIGHSRK-------------------TTLSPAQMDPFYTQGDALTSD 203

Query: 189 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 248
              ++ WVTV+GF  A  + +L +F + G I+KH+    + NWMHI YQ++  A+KAL+K
Sbjct: 204 DQLDDTWVTVFGFPQASASYILLQFAQYGNIIKHVMS-NNGNWMHIQYQSKLQARKALSK 263

Query: 249 NGIQINGVLIVGVKPVDPMHRQALEERLNNP--GFMVIPPVSSRTSELLATRGP----MR 308
           +G      +++GVKP          E+++ P    +  PPV +  +   +   P    MR
Sbjct: 264 DGRIFGESIMIGVKPCIDKSVMEATEKVSTPTVSSVFTPPVKNIGTPTQSVGTPRAASMR 323

Query: 309 PYNLQNGYTSARHSGGAIAS------PSKSLVSKVMDLMFG 330
           P  L   Y +   +   + +        +S+VSK M+ MFG
Sbjct: 324 P--LAATYKTPASADYQVVADKQAPRKDESIVSKAMEYMFG 329

[Close]
BLAST of CsGy7G021690 vs. NCBI nr
Match: XP_004141656.1 (nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical protein Csa_015598 [Cucumis sativus])

HSP 1 Score: 663 bits (1711), Expect = 2.32e-240
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300

Query: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330
           GYTSARHSGGAIASPSKSLVSKVMDLMFGV
Sbjct: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of CsGy7G021690 vs. NCBI nr
Match: KAA0051033.1 (nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa])

HSP 1 Score: 649 bits (1675), Expect = 7.14e-235
Identity = 322/330 (97.58%), Postives = 328/330 (99.39%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPI+GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLPLA
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NGIQINGVLIVGVKPVDPMHRQAL+E+LNNPGFMVIPPVSSRTSELLATRGPMRPY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQN 300

Query: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330
           G TSARHSGGAIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of CsGy7G021690 vs. NCBI nr
Match: XP_008462444.1 (PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo])

HSP 1 Score: 647 bits (1668), Expect = 8.34e-234
Identity = 321/330 (97.27%), Postives = 327/330 (99.09%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPI+GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLPLA
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NGIQINGVLIVGVKPVDPMHRQAL+E+LNNPGFMVIPPVSSRTSELLATRGPM PY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN 300

Query: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330
           G TSARHSGGAIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of CsGy7G021690 vs. NCBI nr
Match: XP_038900103.1 (nuclear pore complex protein NUP35 [Benincasa hispida])

HSP 1 Score: 616 bits (1588), Expect = 1.30e-221
Identity = 307/330 (93.03%), Postives = 316/330 (95.76%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNT VHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTIVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRS SDFSPESGI DYPVSPE KSDPRTPI+ HDFSSP KNKSNASTSYTPISGQQS
Sbjct: 61  TLEDRSGSDFSPESGIADYPVSPEIKSDPRTPIQSHDFSSPLKNKSNASTSYTPISGQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP A
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NGIQINGVLIVGVKPVDPMHRQAL+E+LN+PGFMV PPVSSRTSELLATRG +RPYNLQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNHPGFMVTPPVSSRTSELLATRGLVRPYNLQN 300

Query: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330
           G +SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSSARQSGGTIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of CsGy7G021690 vs. NCBI nr
Match: XP_022151212.1 (nuclear pore complex protein NUP35 [Momordica charantia])

HSP 1 Score: 602 bits (1551), Expect = 5.26e-216
Identity = 296/330 (89.70%), Postives = 312/330 (94.55%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRS  DFSPESGIPDYP+SPE KSDPRTPI+ HDFSSP KNKSNASTSYTP SGQQS
Sbjct: 61  TLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC P  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAG 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NG+QINGVLIVGVKPVDPMHRQAL+E++NNPGFMVIPPV SRT+ELLATRGP+R YNLQN
Sbjct: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300

Query: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330
           G ++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 328

[Close]
BLAST of CsGy7G021690 vs. ExPASy TrEMBL
Match: A0A0A0K7B2 (Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE=3 SV=1)

HSP 1 Score: 663 bits (1711), Expect = 1.12e-240
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300

Query: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330
           GYTSARHSGGAIASPSKSLVSKVMDLMFGV
Sbjct: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of CsGy7G021690 vs. ExPASy TrEMBL
Match: A0A5A7U592 (Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00200 PE=3 SV=1)

HSP 1 Score: 649 bits (1675), Expect = 3.46e-235
Identity = 322/330 (97.58%), Postives = 328/330 (99.39%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPI+GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLPLA
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NGIQINGVLIVGVKPVDPMHRQAL+E+LNNPGFMVIPPVSSRTSELLATRGPMRPY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQN 300

Query: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330
           G TSARHSGGAIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of CsGy7G021690 vs. ExPASy TrEMBL
Match: A0A1S3CH09 (Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 SV=1)

HSP 1 Score: 647 bits (1668), Expect = 4.04e-234
Identity = 321/330 (97.27%), Postives = 327/330 (99.09%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPI+GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLPLA
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NGIQINGVLIVGVKPVDPMHRQAL+E+LNNPGFMVIPPVSSRTSELLATRGPM PY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN 300

Query: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330
           G TSARHSGGAIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of CsGy7G021690 vs. ExPASy TrEMBL
Match: A0A6J1DCV4 (Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC111019186 PE=3 SV=1)

HSP 1 Score: 602 bits (1551), Expect = 2.55e-216
Identity = 296/330 (89.70%), Postives = 312/330 (94.55%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRS  DFSPESGIPDYP+SPE KSDPRTPI+ HDFSSP KNKSNASTSYTP SGQQS
Sbjct: 61  TLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC P  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAG 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NG+QINGVLIVGVKPVDPMHRQAL+E++NNPGFMVIPPV SRT+ELLATRGP+R YNLQN
Sbjct: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300

Query: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330
           G ++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 328

[Close]
BLAST of CsGy7G021690 vs. ExPASy TrEMBL
Match: A0A6J1JYW9 (Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 PE=3 SV=1)

HSP 1 Score: 575 bits (1481), Expect = 1.32e-205
Identity = 287/331 (86.71%), Postives = 304/331 (91.84%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRT NSG +SLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120
           TLEDRS SDFSPESGIPDYPVSPE KSDP TPI+ HDFSSP K+KSNASTS+TPIS QQS
Sbjct: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISAQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180
           RQ SAGFSWWST KGGGSEQEDKGKSSPVEGVIQPGALITL TPREVARPEVQRNCLP  
Sbjct: 121 RQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAG 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILY+NRS A KAL+K
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSK 240

Query: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300
           NGIQING+LIVGVKPVDP+ RQ L+E+LNNPGFMV+PPVSSRT+EL    GP+RPYN QN
Sbjct: 241 NGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNFQN 300

Query: 301 GYTSARHSGGA-IASPSKSLVSKVMDLMFGV 330
           G + AR SGG  IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSYARQSGGTTIASPSKSLVSKVMDLMFGV 331

[Close]
BLAST of CsGy7G021690 vs. TAIR 10
Match: AT3G16310.1 (mitotic phosphoprotein N' end (MPPN) family protein )

HSP 1 Score: 434.9 bits (1117), Expect = 5.9e-122
Identity = 226/334 (67.66%), Postives = 261/334 (78.14%), Query Frame = 0 

Query: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+   HRTP SG +SL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRR--HDFSSPTKNKSNASTSYTPISGQ 120
           TL+DR  SDFSPESGI DY  SP+ KSD RTP +    +  +P K K  AS S++ ++ Q
Sbjct: 61  TLDDR--SDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQ 120

Query: 121 QSRQGSAGFSWWSTSKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCL 180
           QS+Q S   SWWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +
Sbjct: 121 QSQQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQII 180

Query: 181 PLAKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKA 240
           P   L+EEEWVTVYGFSP DTNLVLREFEKCG +LKH+PGPR+ANWMHILYQNRSDA KA
Sbjct: 181 PTGNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKA 240

Query: 241 LNKNGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYN 300
           LNK G+ INGV+IVGVKPVDP+ +QAL ERLNN GFM +PP SS  +     R   RP  
Sbjct: 241 LNKAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTRN---TARPLSRPQY 300

Query: 301 LQNGYT-SARHSGGAIASPSKSLVSKVMDLMFGV 331
           LQNG   S + SGGA+ASPSKS+VSK  DLMFGV
Sbjct: 301 LQNGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

The following BLAST results are available for this feature:
BLAST of CsGy7G021690 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O043268.3e-12167.66Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1... [more]
Q6P6X94.2e-1631.07Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1[more]
Q8NFH52.7e-1528.74Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1[more]
Q68FY11.5e-1327.04Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1[more]
Q66IJ02.6e-1326.69Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1[more]
BLAST of CsGy7G021690 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141656.12.32e-240100.00nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical pr... [more]
KAA0051033.17.14e-23597.58nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclea... [more]
XP_008462444.18.34e-23497.27PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo][more]
XP_038900103.11.30e-22193.03nuclear pore complex protein NUP35 [Benincasa hispida][more]
XP_022151212.15.26e-21689.70nuclear pore complex protein NUP35 [Momordica charantia][more]
BLAST of CsGy7G021690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7B21.12e-240100.00Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE... [more]
A0A5A7U5923.46e-23597.58Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3CH094.04e-23497.27Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 ... [more]
A0A6J1DCV42.55e-21689.70Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC11101918... [more]
A0A6J1JYW91.32e-20586.71Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 P... [more]
BLAST of CsGy7G021690 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G16310.15.9e-12267.66mitotic phosphoprotein N' end (MPPN) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007846RNA-recognition motif (RRM) Nup35-type domainPFAMPF05172Nup35_RRMcoord: 183..266
e-value: 1.6E-25
score: 89.0
IPR007846RNA-recognition motif (RRM) Nup35-type domainPROSITEPS51472RRM_NUP35coord: 182..263
score: 33.100819
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 183..256
e-value: 1.5E-27
score: 97.4
IPR017389Nucleoporin, NUP53PIRSFPIRSF038119NUP53coord: 3..330
e-value: 1.6E-100
score: 335.0
IPR017389Nucleoporin, NUP53PANTHERPTHR21527NUCLEOPORIN NUP35coord: 1..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..153
NoneNo IPR availableCDDcd12441RRM_Nup53_likecoord: 185..258
e-value: 1.7365E-36
score: 124.261
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 185..261

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G021690.1CsGy7G021690.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051028 mRNA transport
biological_process GO:0006607 NLS-bearing protein import into nucleus
biological_process GO:0006999 nuclear pore organization
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006913 nucleocytoplasmic transport
cellular_component GO:0031965 nuclear membrane
cellular_component GO:0044613 nuclear pore central transport channel
cellular_component GO:0044615 nuclear pore nuclear basket
molecular_function GO:0005543 phospholipid binding
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0017056 structural constituent of nuclear pore
molecular_function GO:0003676 nucleic acid binding