CsGy7G021420 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G021420
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptioncryptdin protein-related
LocationGy14Chr7: 23530097 .. 23530838 (+)
RNA-Seq ExpressionCsGy7G021420
SyntenyCsGy7G021420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCAAAGAAGTTTGAGTACATACACGTACGTACCCAATAGTACATACCCCTTCACTTCACTGTTATATCTCTTCAAAATATTCTACCAATGGCCATACCTAAACTCCCTCTAACCTCTGTTTTTATCACCGTTCTCGTCTTCGCCATGGTTCTCTCTCCCATGACAACTCCAACCGCCAGTGCCACTCGTGTTCTTCTACAGCAAAGTAAGGATTTTTTTTCCTTTTTTTTGTAAATTAAATATAGACAGTTTGTACATTTGAATTTGATTAATAAACAACAGTAGCTATTTTCTTTAATGGAAAAAACTTGGTTGTTAATATTTAAAGCTAATTATGAGTTGGGGTGGTGTGTGTATGTGTGTGCAGTTAATAGGCCGCCTATATGTCCGGCGTGCGTGTGCTGCGAACCGCCACCGGCGGGATCCTGTTGCCGCTGTTGTGCTTCTCCGATTCAGACTTCATCTCAGAACGGGTCGCCATGAAAAAATCAGAATTTGCTGATCATACTTGCTGATCTGTCCATGGGAGTAAGGATTTGAAGATGCATGCATGCTTTGAGAATAAGGAGAAGACGAATCTCCATTATCCAAATAATAATAATAAATACTAATTAAGATTTGTTTTAATTAGGTTAATGTGTGATTAGATTAATGTTACGTTGTTATTTGAATTAATGAAGTCTCAGTTTGATATTCTAATTGAAGAATAAAAGAATGAAAATAATATACTTCAAATTTAGT

mRNA sequence

TCCAAAGAAGTTTGAGTACATACACGTACGTACCCAATAGTACATACCCCTTCACTTCACTGTTATATCTCTTCAAAATATTCTACCAATGGCCATACCTAAACTCCCTCTAACCTCTGTTTTTATCACCGTTCTCGTCTTCGCCATGGTTCTCTCTCCCATGACAACTCCAACCGCCAGTGCCACTCGTGTTCTTCTACAGCAAATTAATAGGCCGCCTATATGTCCGGCGTGCGTGTGCTGCGAACCGCCACCGGCGGGATCCTGTTGCCGCTGTTGTGCTTCTCCGATTCAGACTTCATCTCAGAACGGGTCGCCATGAAAAAATCAGAATTTGCTGATCATACTTGCTGATCTGTCCATGGGAGTAAGGATTTGAAGATGCATGCATGCTTTGAGAATAAGGAGAAGACGAATCTCCATTATCCAAATAATAATAATAAATACTAATTAAGATTTGTTTTAATTAGGTTAATGTGTGATTAGATTAATGTTACGTTGTTATTTGAATTAATGAAGTCTCAGTTTGATATTCTAATTGAAGAATAAAAGAATGAAAATAATATACTTCAAATTTAGT

Coding sequence (CDS)

ATGGCCATACCTAAACTCCCTCTAACCTCTGTTTTTATCACCGTTCTCGTCTTCGCCATGGTTCTCTCTCCCATGACAACTCCAACCGCCAGTGCCACTCGTGTTCTTCTACAGCAAATTAATAGGCCGCCTATATGTCCGGCGTGCGTGTGCTGCGAACCGCCACCGGCGGGATCCTGTTGCCGCTGTTGTGCTTCTCCGATTCAGACTTCATCTCAGAACGGGTCGCCATGA

Protein sequence

MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSCCRCCASPIQTSSQNGSP*
Homology
BLAST of CsGy7G021420 vs. NCBI nr
Match: KGN45568.1 (hypothetical protein Csa_016454 [Cucumis sativus])

HSP 1 Score: 149 bits (377), Expect = 2.79e-45
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60
          MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC
Sbjct: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60

Query: 61 CRCCASPIQTSSQNGSP 77
          CRCCASPIQTSSQNGSP
Sbjct: 61 CRCCASPIQTSSQNGSP 77

BLAST of CsGy7G021420 vs. NCBI nr
Match: KAA0059464.1 (hypothetical protein E6C27_scaffold242G001940 [Cucumis melo var. makuwa] >TYK03859.1 hypothetical protein E5676_scaffold347G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (344), Expect = 3.04e-40
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0

Query: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60
          MAIPK P+TSVF+TVLVFAM+LSPMT PTA+ATRVLLQQ+NRPPICPACVCCEP PAGSC
Sbjct: 1  MAIPKSPITSVFMTVLVFAMLLSPMTIPTATATRVLLQQLNRPPICPACVCCEPAPAGSC 60

Query: 61 CRCCASPIQTSSQNGSP 77
          CRCCASPIQTSSQNGSP
Sbjct: 61 CRCCASPIQTSSQNGSP 77

BLAST of CsGy7G021420 vs. NCBI nr
Match: XP_038896231.1 (uncharacterized protein LOC120084509 [Benincasa hispida])

HSP 1 Score: 128 bits (321), Expect = 9.82e-37
Identity = 67/77 (87.01%), Postives = 69/77 (89.61%), Query Frame = 0

Query: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60
          MA  K  LTSV +TVLVF MVLSPMT PTA+ATRVLLQQINRPPICPACVCCEP PAGSC
Sbjct: 1  MASAKFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINRPPICPACVCCEPAPAGSC 60

Query: 61 CRCCASPIQTSSQNGSP 77
          CRCCASPIQTSSQNGSP
Sbjct: 61 CRCCASPIQTSSQNGSP 77

BLAST of CsGy7G021420 vs. NCBI nr
Match: XP_022992462.1 (uncharacterized protein LOC111488758 [Cucurbita maxima])

HSP 1 Score: 120 bits (302), Expect = 8.00e-34
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 0

Query: 10 SVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSCCRCCASPIQ 69
          S+F+TVLVFAMVLSPMT  TA+ATR LLQQ+NRPPICPACVCCEP PAGSCCRCCA+PIQ
Sbjct: 11 SIFVTVLVFAMVLSPMTISTANATRALLQQVNRPPICPACVCCEPAPAGSCCRCCATPIQ 70

Query: 70 TSSQNGSP 77
          TSSQNGSP
Sbjct: 71 TSSQNGSP 78

BLAST of CsGy7G021420 vs. NCBI nr
Match: KAG6575497.1 (hypothetical protein SDJN03_26136, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119 bits (299), Expect = 2.29e-33
Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 0

Query: 9  TSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSCCRCCASPI 68
          TS+F+TVLVFAMVLSP T  TA+ATRVLLQQ+NRPPICPACVCCEP PAGSCCRCCA+PI
Sbjct: 10 TSIFVTVLVFAMVLSPTTISTANATRVLLQQVNRPPICPACVCCEPAPAGSCCRCCATPI 69

Query: 69 QTSSQNGSP 77
          QTSSQ+GSP
Sbjct: 70 QTSSQSGSP 78

BLAST of CsGy7G021420 vs. ExPASy TrEMBL
Match: A0A0A0K7Y9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452230 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 1.35e-45
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60
          MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC
Sbjct: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60

Query: 61 CRCCASPIQTSSQNGSP 77
          CRCCASPIQTSSQNGSP
Sbjct: 61 CRCCASPIQTSSQNGSP 77

BLAST of CsGy7G021420 vs. ExPASy TrEMBL
Match: A0A5A7UWJ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00530 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 1.47e-40
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0

Query: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60
          MAIPK P+TSVF+TVLVFAM+LSPMT PTA+ATRVLLQQ+NRPPICPACVCCEP PAGSC
Sbjct: 1  MAIPKSPITSVFMTVLVFAMLLSPMTIPTATATRVLLQQLNRPPICPACVCCEPAPAGSC 60

Query: 61 CRCCASPIQTSSQNGSP 77
          CRCCASPIQTSSQNGSP
Sbjct: 61 CRCCASPIQTSSQNGSP 77

BLAST of CsGy7G021420 vs. ExPASy TrEMBL
Match: A0A6J1JPW7 (uncharacterized protein LOC111488758 OS=Cucurbita maxima OX=3661 GN=LOC111488758 PE=4 SV=1)

HSP 1 Score: 120 bits (302), Expect = 3.87e-34
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 0

Query: 10 SVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSCCRCCASPIQ 69
          S+F+TVLVFAMVLSPMT  TA+ATR LLQQ+NRPPICPACVCCEP PAGSCCRCCA+PIQ
Sbjct: 11 SIFVTVLVFAMVLSPMTISTANATRALLQQVNRPPICPACVCCEPAPAGSCCRCCATPIQ 70

Query: 70 TSSQNGSP 77
          TSSQNGSP
Sbjct: 71 TSSQNGSP 78

BLAST of CsGy7G021420 vs. ExPASy TrEMBL
Match: A0A6J1GR88 (uncharacterized protein LOC111456398 OS=Cucurbita moschata OX=3662 GN=LOC111456398 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 4.53e-33
Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0

Query: 9  TSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSCCRCCASPI 68
          TS+F+TVLVFAMVLSP T  T +ATRVLLQQ+NRPPICPACVCCEP PAGSCCRCCA+PI
Sbjct: 10 TSIFVTVLVFAMVLSPTTISTVNATRVLLQQVNRPPICPACVCCEPAPAGSCCRCCATPI 69

Query: 69 QTSSQNGSP 77
          QTSSQ+GSP
Sbjct: 70 QTSSQSGSP 78

BLAST of CsGy7G021420 vs. ExPASy TrEMBL
Match: A0A6J1CSH3 (uncharacterized protein LOC111013890 OS=Momordica charantia OX=3673 GN=LOC111013890 PE=4 SV=1)

HSP 1 Score: 102 bits (254), Expect = 8.56e-27
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0

Query: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60
          MA PK  L+S+F+TVLVF MVLSPM + TA+ATR+ LQ + RPPICPACVCC+PPP GSC
Sbjct: 5  MAAPKFSLSSIFVTVLVFTMVLSPMIS-TAAATRLPLQ-VRRPPICPACVCCKPPPPGSC 64

Query: 61 CR-CCASPIQTSSQNGSP 77
          C+ CCA+PI+TSSQNGSP
Sbjct: 65 CKQCCATPIETSSQNGSP 80

BLAST of CsGy7G021420 vs. TAIR 10
Match: AT1G51920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 9.3e-10
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 0

Query: 10 SVFITVLV-FAMVLSPMTTPTASATRVLLQQI-NRPPICPACVCCEPPPAGSCCRCCASP 69
          S+F+ + V F +++ P++   ++ATR+    I +R PICPACVCCEP P GSCCRCCASP
Sbjct: 9  SIFLKLFVLFLLLVLPLS--QSNATRIPRAPISSRRPICPACVCCEPAPLGSCCRCCASP 68

Query: 70 IQTSSQNGS 77
          I T + + S
Sbjct: 69 IVTQTHHHS 75

BLAST of CsGy7G021420 vs. TAIR 10
Match: AT1G51915.1 (cryptdin protein-related )

HSP 1 Score: 41.2 bits (95), Expect = 4.5e-04
Identity = 22/55 (40.00%), Postives = 34/55 (61.82%), Query Frame = 0

Query: 9  TSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSCCRC 64
          +++ I+VLV A+VLSP+    A+   +  +      +CP+CVCC P P G+CC C
Sbjct: 7  STMLISVLVLALVLSPILPCQATRAHLDAETRMLRRVCPSCVCCAPAPRGACCPC 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN45568.12.79e-45100.00hypothetical protein Csa_016454 [Cucumis sativus][more]
KAA0059464.13.04e-4089.61hypothetical protein E6C27_scaffold242G001940 [Cucumis melo var. makuwa] >TYK038... [more]
XP_038896231.19.82e-3787.01uncharacterized protein LOC120084509 [Benincasa hispida][more]
XP_022992462.18.00e-3486.76uncharacterized protein LOC111488758 [Cucurbita maxima][more]
KAG6575497.12.29e-3385.51hypothetical protein SDJN03_26136, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A0A0K7Y91.35e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452230 PE=4 SV=1[more]
A0A5A7UWJ71.47e-4089.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1JPW73.87e-3486.76uncharacterized protein LOC111488758 OS=Cucurbita maxima OX=3661 GN=LOC111488758... [more]
A0A6J1GR884.53e-3384.06uncharacterized protein LOC111456398 OS=Cucurbita moschata OX=3662 GN=LOC1114563... [more]
A0A6J1CSH38.56e-2771.79uncharacterized protein LOC111013890 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
Match NameE-valueIdentityDescription
AT1G51920.19.3e-1050.72unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G51915.14.5e-0440.00cryptdin protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36328:SF1TRANSMEMBRANE PROTEINcoord: 7..77
NoneNo IPR availablePANTHERPTHR36328TRANSMEMBRANE PROTEINcoord: 7..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G021420.1CsGy7G021420.1mRNA