CsGy7G015455 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G015455
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr7: 19407200 .. 19407747 (-)
RNA-Seq Expression	CsGy7G015455
Synteny	CsGy7G015455

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTGCTTACTTAACTTCCATTCTTTTTCCAACTATAAATAATGCTAAACCCATTCCACATTTCTCATTCACTTTCTCTTCACTAATCAACCACACCCCTCAATTTCAAATGGCTTCTTCCCTCAAAACCCTAGTTTCAATCGTGTTTATCGCTCTCTTCATCTTACTCTCTCAAACTCCGTCCACTTCGTCTGCGGTACTTCACACCATAGCTTTTGATTCTCTCACTGAAATTAATTATTTTCACCGAAACCTCCTTCAAGCCATGGATCGTCATCAGGCTGATGGTAGAAGGCGAACTCGACGAACCGTAGTGAGAGATCAAGCCCAAGCTCCGAGTCCATCAACTGCAAATCGGAGCCAAACCTTGTCATTGGGGGCTGGCTCTGTCCTAGGTCTTTTTATTGTGGTTGCTCTATTTGTTTGAGTGAAACGTTGCCTTTATTATTATTGTTTTGTTTTTATTACAAGATTATGGATTTGTTTTTTTATTAATGAAAAAAAATATTGGAGTGTATTAATATATACTAATTCATTCCAATCTAAT

mRNA sequence

CTCTTGCTTACTTAACTTCCATTCTTTTTCCAACTATAAATAATGCTAAACCCATTCCACATTTCTCATTCACTTTCTCTTCACTAATCAACCACACCCCTCAATTTCAAATGGCTTCTTCCCTCAAAACCCTAGTTTCAATCGTGTTTATCGCTCTCTTCATCTTACTCTCTCAAACTCCGTCCACTTCGTCTGCGGTACTTCACACCATAGCTTTTGATTCTCTCACTGAAATTAATTATTTTCACCGAAACCTCCTTCAAGCCATGGATCGTCATCAGGCTGATGGTAGAAGGCGAACTCGACGAACCGTAGTGAGAGATCAAGCCCAAGCTCCGAGTCCATCAACTGCAAATCGGAGCCAAACCTTGTCATTGGGGGCTGGCTCTGTCCTAGGTCTTTTTATTGTGGTTGCTCTATTTGTTTGAGTGAAACGTTGCCTTTATTATTATTGTTTTGTTTTTATTACAAGATTATGGATTTGTTTTTTTATTAATGAAAAAAAATATTGGAGTGTATTAATATATACTAATTCATTCCAATCTAAT

Coding sequence (CDS)

ATGGCTTCTTCCCTCAAAACCCTAGTTTCAATCGTGTTTATCGCTCTCTTCATCTTACTCTCTCAAACTCCGTCCACTTCGTCTGCGGTACTTCACACCATAGCTTTTGATTCTCTCACTGAAATTAATTATTTTCACCGAAACCTCCTTCAAGCCATGGATCGTCATCAGGCTGATGGTAGAAGGCGAACTCGACGAACCGTAGTGAGAGATCAAGCCCAAGCTCCGAGTCCATCAACTGCAAATCGGAGCCAAACCTTGTCATTGGGGGCTGGCTCTGTCCTAGGTCTTTTTATTGTGGTTGCTCTATTTGTTTGA

Protein sequence

MASSLKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQADGRRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALFV*

Homology

[Close]

BLAST of CsGy7G015455 vs. NCBI nr
Match: KGN44884.1 (hypothetical protein Csa_015752 [Cucumis sativus])

HSP 1 Score: 189 bits (479), Expect = 5.73e-60
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MASSLKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQADG 60
           MASSLKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQADG
Sbjct: 1   MASSLKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQADG 60

Query: 61  RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALFV 105
           RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALFV
Sbjct: 61  RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALFV 105

[Close]

BLAST of CsGy7G015455 vs. NCBI nr
Match: XP_022954099.1 (uncharacterized protein LOC111456466 [Cucurbita moschata])

HSP 1 Score: 52.0 bits (123), Expect = 2.91e-05
Identity = 47/113 (41.59%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 5   LKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQA--DG-- 64
           +K+L+SI  +AL +L    P   SA  H +A   L  +  F R+ LQ  +RHQ   +G  
Sbjct: 93  IKSLISIALLALLLLSEHLPI--SAADHGVAPSPLARV--FRRDTLQTAERHQVAENGIG 152

Query: 65  ---------RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALF 104
                    RRR RR V R  A+ PSPS+AN SQT S G GS+L L  V  LF
Sbjct: 153 YQYSFEQKIRRRARRAVRR--AEGPSPSSANWSQTSSFGVGSLLCLCTVFGLF 199

[Close]

BLAST of CsGy7G015455 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 48.1 bits (113), Expect = 5.91e-04
Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 5   LKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQA--DG-- 64
           +K+L+SI  +AL +L  + P   SA  H +A   L  +  F  + LQ  +RHQ   +G  
Sbjct: 66  IKSLISIALLALLLLFERLPI--SAADHGVAPSPLAGV--FRLDTLQTAERHQVAENGIG 125

Query: 65  ---------RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALF 104
                    RRR RR V R  A+ PSPS+AN S+T S G GS+L L  V  LF
Sbjct: 126 NQYSFEQKIRRRARRAVRR--AEGPSPSSANWSRTSSFGVGSLLCLCTVFGLF 172

[Close]

BLAST of CsGy7G015455 vs. ExPASy TrEMBL
Match: A0A0A0K7L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394040 PE=4 SV=1)

HSP 1 Score: 189 bits (479), Expect = 2.77e-60
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MASSLKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQADG 60
           MASSLKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQADG
Sbjct: 1   MASSLKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQADG 60

Query: 61  RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALFV 105
           RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALFV
Sbjct: 61  RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALFV 105

[Close]

BLAST of CsGy7G015455 vs. ExPASy TrEMBL
Match: A0A6J1GRX2 (uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC111456466 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.41e-05
Identity = 47/113 (41.59%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 5   LKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQA--DG-- 64
           +K+L+SI  +AL +L    P   SA  H +A   L  +  F R+ LQ  +RHQ   +G  
Sbjct: 93  IKSLISIALLALLLLSEHLPI--SAADHGVAPSPLARV--FRRDTLQTAERHQVAENGIG 152

Query: 65  ---------RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALF 104
                    RRR RR V R  A+ PSPS+AN SQT S G GS+L L  V  LF
Sbjct: 153 YQYSFEQKIRRRARRAVRR--AEGPSPSSANWSQTSSFGVGSLLCLCTVFGLF 199

[Close]

BLAST of CsGy7G015455 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.86e-04
Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 5   LKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQA--DG-- 64
           +K+L+SI  +AL +L  + P   SA  H +A   L  +  F  + LQ  +RHQ   +G  
Sbjct: 66  IKSLISIALLALLLLFERLPI--SAADHGVAPSPLAGV--FRLDTLQTAERHQVAENGIG 125

Query: 65  ---------RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALF 104
                    RRR RR V R  A+ PSPS+AN S+T S G GS+L L  V  LF
Sbjct: 126 NQYSFEQKIRRRARRAVRR--AEGPSPSSANWSRTSSFGVGSLLCLCTVFGLF 172

The following BLAST results are available for this feature:

BLAST of CsGy7G015455 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G015455 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44884.1	5.73e-60	100.00	hypothetical protein Csa_015752 [Cucumis sativus]	[more]
XP_022954099.1	2.91e-05	41.59	uncharacterized protein LOC111456466 [Cucurbita moschata]	[more]
XP_022992473.1	5.91e-04	39.82	uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]	[more]

BLAST of CsGy7G015455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7L9	2.77e-60	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394040 PE=4 SV=1	[more]
A0A6J1GRX2	1.41e-05	41.59	uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC1114564...	[more]
A0A6J1JZB1	2.86e-04	39.82	uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy7G015455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G015455.1	CsGy7G015455.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane