CsGy7G014750 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G014750
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Elongation factor
Location	Gy14Chr7: 18794691 .. 18796150 (-)
RNA-Seq Expression	CsGy7G014750
Synteny	CsGy7G014750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACTCTCACCATACATTAGTAGTTTTGAAGCTCTTTTTTTTTTCTTTCTAAAACCTCTTTCTCTTTGTTTTTCTTTTCCTTTAATTTTCTCATCTTCTTCACCAACCATGAACCAAACCTAATTGCGAGCTTTCAGAGATTCATATCCCACAGCCCCAAATCTCTTGTTCTCTTCCTCAAATGGGATGGTTCAAATCCTTCCTCATTTCACCTTTCAAGAAGCTTTGGGATCGTCTTCACTCCCCTCACAAATCAAACCGTAATCGTCTACTTCGACCCCTAATTCATCATCTGCATCAGTTTTTGTTCTATATTTTTTTGTCATCGACATTGATTGATTCAAACCTAACTATTTTGTGATGATTTCTTTTTCAATAATGTAATGCTTCGGAGGTCGTTGTTCGTATTTATTGGTTGAGTTGAACTTTTATTTTCTTTCAAAGACACAACTTGGTATGAATAATTTGTTTTAGATGAATTTCTTTCGAGAGCTTAAAAATAAAATCTTTTATTTTTCATTTCAACACTTTCTAAGCATAGAAATTCAATCCAAACAAAATCCTACATTGTTAGTTATGGGAAGTTATTCCTCCCATAGTCTTGTGTTCATATGCGTAATGTGTTTTGTTTTTTATTTTTATTCTCGTCTCTTTATCAATTCAAATAATTGGCAATTTAGCCATTCCATAGTTTGCTTTTTTTTTAGAAAAATTAAATCTATTTATTCTCCAATTTTTACCATAATTTTTATTTTTTTCTTTAAATATAAAAATAAGTTGTTCTCGAGCCAACTTATATATAAAAAAAAAATTAAAAGCTACTTGTTTTTCTTCAAAACTTGCTATGATTTTTAAGATTGTAAAGTTTAAGTTGATAAAGGAGAAAGAAACTAAGAGCTAGAATGAATGTTTATAGGTGCGATTTTTTGTTTTTTTAGTAAATAACACTTAAAATTGTGTATTGTTGGTGAAGATTTTGATTTTTACAGTGACATTGCTTAAATTACACAGCAAAAAAAATCTATTTTTCCAAATGTTAGGTAAACTACTTGTGATTAACTAGCCACATTTATAAATGATTTCTAGCCATAGTGGTAATAGAATCAATTTAACATAAATTAAAACATGGGAGAAGACTAAATTTGAAACTTTTGAAATAATAGAAGTTTAATCGTCAAAAATATCCTAATTACCTATTTGATTGACAAACAAATTAGAGAAAGAATGTTCAAATTTTATCTAATCTCAATGCAAACTCGCCATGAATTGAAGTTTTGGTAATCTTTTTGTTATTTATTTACGTAGGAAAAGGAATCTACATTTTGTATAAAGATGTGAAGTCTTGCCCTTGTGAAGATGTTCAAATGCTTTGGTCCATTCTCGTGCAGTCTGCCTCTCCTCCTAATTCACCATTACCATCATGAAGTCGAGCTTTTCTCCGTTGCCAAAAGATGGCGAT

mRNA sequence

CAAACTCTCACCATACATTAGTAGTTTTGAAGCTCTTTTTTTTTTCTTTCTAAAACCTCTTTCTCTTTGTTTTTCTTTTCCTTTAATTTTCTCATCTTCTTCACCAACCATGAACCAAACCTAATTGCGAGCTTTCAGAGATTCATATCCCACAGCCCCAAATCTCTTGTTCTCTTCCTCAAATGGGATGGTTCAAATCCTTCCTCATTTCACCTTTCAAGAAGCTTTGGGATCGTCTTCACTCCCCTCACAAATCAAACCGAAAAGGAATCTACATTTTGTATAAAGATGTGAAGTCTTGCCCTTGTGAAGATGTTCAAATGCTTTGGTCCATTCTCGTGCAGTCTGCCTCTCCTCCTAATTCACCATTACCATCATGAAGTCGAGCTTTTCTCCGTTGCCAAAAGATGGCGAT

Coding sequence (CDS)

ATGGGATGGTTCAAATCCTTCCTCATTTCACCTTTCAAGAAGCTTTGGGATCGTCTTCACTCCCCTCACAAATCAAACCGAAAAGGAATCTACATTTTGTATAAAGATGTGAAGTCTTGCCCTTGTGAAGATGTTCAAATGCTTTGGTCCATTCTCGTGCAGTCTGCCTCTCCTCCTAATTCACCATTACCATCATGA

Protein sequence

MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPNSPLPS*

Homology

[Close]

BLAST of CsGy7G014750 vs. NCBI nr
Match: KGN44804.1 (hypothetical protein Csa_015628 [Cucumis sativus])

HSP 1 Score: 142 bits (359), Expect = 6.71e-43
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60
          MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN
Sbjct: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60

Query: 61 SPLPS 65
          SPLPS
Sbjct: 61 SPLPS 65

[Close]

BLAST of CsGy7G014750 vs. NCBI nr
Match: XP_025982996.1 (uncharacterized protein LOC113000477 [Glycine max] >KHN02570.1 hypothetical protein glysoja_002594 [Glycine soja] >KAG4913164.1 hypothetical protein JHK86_053597 [Glycine max] >KAG4928061.1 hypothetical protein JHK85_054547 [Glycine max] >KAG5083584.1 hypothetical protein JHK84_053622 [Glycine max] >KAG5086352.1 hypothetical protein JHK82_053749 [Glycine max])

HSP 1 Score: 96.3 bits (238), Expect = 1.88e-24
Identity = 48/65 (73.85%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60
          MGWF+S L+ P KKLWDRLHS HK  R+GIYILYKDVKSCPCEDV +LWSILV+S + P 
Sbjct: 1  MGWFQS-LLCPLKKLWDRLHSSHKK-RRGIYILYKDVKSCPCEDVHVLWSILVESGAAPA 60

Query: 61 SPLPS 65
          S LPS
Sbjct: 61 S-LPS 62

[Close]

BLAST of CsGy7G014750 vs. NCBI nr
Match: RXI05532.1 (hypothetical protein DVH24_017574 [Malus domestica])

HSP 1 Score: 96.3 bits (238), Expect = 1.98e-24
Identity = 48/66 (72.73%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60
          MGW +S L+SP KKLWDRLHS H+  RKGIYILYKDV+SCPCEDV +LWSILV S S P 
Sbjct: 1  MGWLRS-LVSPLKKLWDRLHSSHRK-RKGIYILYKDVRSCPCEDVHVLWSILVDSQSHPT 60

Query: 61 SP-LPS 65
           P LPS
Sbjct: 61 PPALPS 64

[Close]

BLAST of CsGy7G014750 vs. NCBI nr
Match: KAG2697077.1 (hypothetical protein I3760_07G089400 [Carya illinoinensis] >KAG6647612.1 hypothetical protein CIPAW_07G090400 [Carya illinoinensis] >KAG6703607.1 hypothetical protein I3842_07G092700 [Carya illinoinensis] >KAG7970537.1 hypothetical protein I3843_07G089000 [Carya illinoinensis])

HSP 1 Score: 95.5 bits (236), Expect = 3.70e-24
Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60
          MGW KS L+SP KK+W+RLHS H+  R+GIYILYKDVKSCPCEDVQ+LWSILV+S +P +
Sbjct: 1  MGWLKS-LLSPLKKIWNRLHSSHRE-RRGIYILYKDVKSCPCEDVQVLWSILVESRTPAS 60

Query: 61 SP 62
           P
Sbjct: 61 LP 60

[Close]

BLAST of CsGy7G014750 vs. NCBI nr
Match: KAG2693672.1 (hypothetical protein I3760_08G107800 [Carya illinoinensis] >KAG6645213.1 hypothetical protein CIPAW_08G106900 [Carya illinoinensis] >KAG6700331.1 hypothetical protein I3842_08G107700 [Carya illinoinensis] >KAG7967520.1 hypothetical protein I3843_08G103500 [Carya illinoinensis])

HSP 1 Score: 95.1 bits (235), Expect = 4.87e-24
Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASP 58
          MGWFKS L+SP KK+WDRLHS H+  R GIYILYKDV SCPCEDVQ+LWSILV+S +P
Sbjct: 1  MGWFKS-LLSPLKKIWDRLHSSHRK-RNGIYILYKDVMSCPCEDVQVLWSILVESRTP 56

[Close]

BLAST of CsGy7G014750 vs. ExPASy TrEMBL
Match: A0A0A0K7C3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388370 PE=4 SV=1)

HSP 1 Score: 142 bits (359), Expect = 3.25e-43
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60
          MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN
Sbjct: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60

Query: 61 SPLPS 65
          SPLPS
Sbjct: 61 SPLPS 65

[Close]

BLAST of CsGy7G014750 vs. ExPASy TrEMBL
Match: K7MYL2 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_19G157600 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.10e-25
Identity = 48/65 (73.85%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60
          MGWF+S L+ P KKLWDRLHS HK  R+GIYILYKDVKSCPCEDV +LWSILV+S + P 
Sbjct: 1  MGWFQS-LLCPLKKLWDRLHSSHKK-RRGIYILYKDVKSCPCEDVHVLWSILVESGAAPA 60

Query: 61 SPLPS 65
          S LPS
Sbjct: 61 S-LPS 62

[Close]

BLAST of CsGy7G014750 vs. ExPASy TrEMBL
Match: A0A498KIY5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017574 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.59e-25
Identity = 48/66 (72.73%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60
          MGW +S L+SP KKLWDRLHS H+  RKGIYILYKDV+SCPCEDV +LWSILV S S P 
Sbjct: 1  MGWLRS-LVSPLKKLWDRLHSSHRK-RKGIYILYKDVRSCPCEDVHVLWSILVDSQSHPT 60

Query: 61 SP-LPS 65
           P LPS
Sbjct: 61 PPALPS 64

[Close]

BLAST of CsGy7G014750 vs. ExPASy TrEMBL
Match: K7KF99 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G155400 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.49e-24
Identity = 47/65 (72.31%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60
          MGW +S L+ P KKLWDRLHS HK  R+GIYILYKDVKSCPCEDV +LWSILV+S + P 
Sbjct: 1  MGWLQS-LLCPLKKLWDRLHSSHKK-RRGIYILYKDVKSCPCEDVHVLWSILVESGAAPA 60

Query: 61 SPLPS 65
          S LPS
Sbjct: 61 S-LPS 62

[Close]

BLAST of CsGy7G014750 vs. ExPASy TrEMBL
Match: A0A445LCA2 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007270 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.49e-24
Identity = 47/65 (72.31%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 1  MGWFKSFLISPFKKLWDRLHSPHKSNRKGIYILYKDVKSCPCEDVQMLWSILVQSASPPN 60
          MGW +S L+ P KKLWDRLHS HK  R+GIYILYKDVKSCPCEDV +LWSILV+S + P 
Sbjct: 1  MGWLQS-LLCPLKKLWDRLHSSHKK-RRGIYILYKDVKSCPCEDVHVLWSILVESGAAPA 60

Query: 61 SPLPS 65
          S LPS
Sbjct: 61 S-LPS 62

The following BLAST results are available for this feature:

BLAST of CsGy7G014750 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G014750 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44804.1	6.71e-43	100.00	hypothetical protein Csa_015628 [Cucumis sativus]	[more]
XP_025982996.1	1.88e-24	73.85	uncharacterized protein LOC113000477 [Glycine max] >KHN02570.1 hypothetical prot...	[more]
RXI05532.1	1.98e-24	72.73	hypothetical protein DVH24_017574 [Malus domestica]	[more]
KAG2697077.1	3.70e-24	70.97	hypothetical protein I3760_07G089400 [Carya illinoinensis] >KAG6647612.1 hypothe...	[more]
KAG2693672.1	4.87e-24	75.86	hypothetical protein I3760_08G107800 [Carya illinoinensis] >KAG6645213.1 hypothe...	[more]

BLAST of CsGy7G014750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7C3	3.25e-43	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388370 PE=4 SV=1	[more]
K7MYL2	9.10e-25	73.85	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_19G157600 PE=4 SV=1	[more]
A0A498KIY5	9.59e-25	72.73	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017574 PE=4 SV=1	[more]
K7KF99	7.49e-24	72.31	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G155400 PE=4 SV=1	[more]
A0A445LCA2	7.49e-24	72.31	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007270 PE=4 SV=1	[more]

BLAST of CsGy7G014750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 1..64
None	No IPR available	PANTHER	PTHR33181:SF30	OS07G0204400 PROTEIN	coord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G014750.2	CsGy7G014750.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
molecular_function	GO:0003746	translation elongation factor activity