CsGy7G012285 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G012285
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr7: 15748877 .. 15749844 (-)
RNA-Seq Expression	CsGy7G012285
Synteny	CsGy7G012285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCCATAATTTGTGTTTGGATAAAGAATCCAAAATTGAGAAGAAGGAATTATGTAGTAAAGGCTAAATGAGGGAATTTGAAAACATTAAACAAATCCCATCGTCTCCAAACAAAACTCGCATTACGTTGTTTGTTTTCTTGAAGGAGGGGAAAAGGAAAATAAAACCTTCATTTTTAAAAGACGTTTTGGTGCCTCCATTTTCCTTTTTAATTCTTCTCTTTTTTGTGAACTCTCAGATCCCTCTCTTCTCTTCTATTTTTCTTCTTCCGACGAGCACTCCGGCGTTCCTCAACCTCCCACCAACGTCTGGGGCCTTCACCGTTCTATTCAAGCTATAACAGCATTCAGCGACGCTAAACATCTAACTCCGGCGGTGCCGGCGGAAGCTTCACAGCAAGGGTAATTTCCCTTTTCTTTCAACTGGTCACTGCTTTTTTTATTTGGGGTTCAAGCCGCAATGTTTTTTTTACTTCGATTTAGACTGCAAACCACCCATCAATCTCATAATTCAACACTCGTTGTTCCAGTATTTGAGTCCAATACCGAATGTTGTGTTTATGAGTTGTAAGATTTGGGTTTTATACTCCGTTGGATCTTCCCGTCAGTTCGACTTTTACAAATCTGAACCTTTGATGTTGCCATTCTAATCTGCTTACTCAGGTTATGGATCGCAGCTGATTTTAAGATAATGCAAAAAATTGTTTAGGTTTAAAGCTGATATTGCATTGCTTCATATCGTTAGATTTCTTAGATTTTATTTCTGGGTGTAGCGACCCGTTATTTTGGTTCAGTGCTAGGAACATGTTTTGGTTGGATTCTTCAGAACATATTGTAAAAAGTTGTGGGGTTGATTCATATATATATATTATATAAATATTTATGTATGTATATGTATTTATATATTTCTTTTCATTTTCAATTTGAAACCAGTTCATATTTGTTTCAACTTTGCTGGTGCGCGTGA

mRNA sequence

ATGGTCCATAATTTGTGTTTGGATAAAGAATCCAAAATTGAGAAGAAGGAATTATGTAATCCCTCTCTTCTCTTCTATTTTTCTTCTTCCGACGAGCACTCCGGCGTTCCTCAACCTCCCACCAACGTCTGGGGCCTTCACCGTTCTATTCAAGCTATAACAGCATTCAGCGACGCTAAACATCTAACTCCGGCGGTGCCGGCGGAAGCTTCACAGCAAGGTTCATATTTGTTTCAACTTTGCTGGTGCGCGTGA

Coding sequence (CDS)

ATGGTCCATAATTTGTGTTTGGATAAAGAATCCAAAATTGAGAAGAAGGAATTATGTAATCCCTCTCTTCTCTTCTATTTTTCTTCTTCCGACGAGCACTCCGGCGTTCCTCAACCTCCCACCAACGTCTGGGGCCTTCACCGTTCTATTCAAGCTATAACAGCATTCAGCGACGCTAAACATCTAACTCCGGCGGTGCCGGCGGAAGCTTCACAGCAAGGTTCATATTTGTTTCAACTTTGCTGGTGCGCGTGA

Protein sequence

MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRSIQAITAFSDAKHLTPAVPAEASQQGSYLFQLCWCA*

Homology

[Close]

BLAST of CsGy7G012285 vs. NCBI nr
Match: KGN44532.1 (hypothetical protein Csa_016753 [Cucumis sativus])

HSP 1 Score: 154 bits (390), Expect = 8.23e-47
Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRSIQAITAFSDAK 60
          MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHR+IQAITAFSDAK
Sbjct: 1  MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRAIQAITAFSDAK 60

Query: 61 HLTPAVPAEASQQG 74
          HLTPAVPAEASQQG
Sbjct: 61 HLTPAVPAEASQQG 74

[Close]

BLAST of CsGy7G012285 vs. ExPASy TrEMBL
Match: A0A0A0K877 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G325730 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 3.99e-47
Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRSIQAITAFSDAK 60
          MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHR+IQAITAFSDAK
Sbjct: 1  MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRAIQAITAFSDAK 60

Query: 61 HLTPAVPAEASQQG 74
          HLTPAVPAEASQQG
Sbjct: 61 HLTPAVPAEASQQG 74

The following BLAST results are available for this feature:

BLAST of CsGy7G012285 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G012285 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44532.1	8.23e-47	98.65	hypothetical protein Csa_016753 [Cucumis sativus]	[more]

BLAST of CsGy7G012285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K877	3.99e-47	98.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G325730 PE=4 SV=1	[more]

BLAST of CsGy7G012285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G012285.1	CsGy7G012285.1	mRNA