CsGy7G011550 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G011550
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	DEAD-box ATP-dependent RNA helicase
Location	Gy14Chr7: 14563564 .. 14576593 (+)
RNA-Seq Expression	CsGy7G011550
Synteny	CsGy7G011550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGCACAGGAAGGACTCTCCTTTCGCTTTCAGTCTCCACAAACCTCTTAATCAGTTCTCGTCTTTCACCTCCCAAATGTCTTCCCCTCCTCAAAATACCAAAACCCTTCAGAAATTTCTCAGGATTTAGGCCTATTTCCTCTGCTACCGCCGCCACAACCTCCACAGAATCCACGGAAACAATCCAGGTGATTGAACCCTTGAAGCATTCTCAACTGCTTGAGAGGCTGAGGACTAGACATCTCAAAGAATCTGCTCCTAAAACCAAGCCAACCAGAAATACTCTGTCCCAGTCTGTGGGAAGTGCGGAGGATGAAATGAAGAAGTCTGAAAAGAAGAAGAAGAAGTTGGATGAAAGTTTTGAAGAGTTGGGTTTGAATGAGGAGGTGATGGGGGCTGTGAGGGAGATGGGCATTCAGGTTCCTAGTGAGATTCAGTGCATTGGAATCCCAGCTGTTTTGGAAGGGAAGAGTGTGATTTTGGGTTCGCATACTGGCTCTGGTAAAACTCTGGCTTACTTGCTACCCCTTGTTCAGGTACTTTTAGTTTTTCTTATTCAACAGTATTTTTGTTGTGGGGTTCCCGTAAATATGTTGTAGACTAAACTATCTTCTAATATTTGGAGCCTGGTAGTGGCTGTGGTATTTGTTTCGTGTTGTCACTGTACAGTTCTACATTTAGAAGGATTTTTTTTCTATTAACTATCTCCTATCTTGTTACATTATTCTATGAATTGCCTGATTCCATCTTTGATGCAAATTGGTTTGATCTTTTTCTTTTTCTTTTACTCTCCTTGTGTATAAGATCTTGGTATTGGCAGCGTAACCTATTGGATGAGGAAGTTTGTATATTGATTACTCTGTGTTATTTACTTGTTTTATAGTATCCCAGTCTACTAATTAAGTAGCATTTGCGATTTCTGATTTCTTGGTTTGTAGTTGCTGAGGCGAGATGAAGAATTGTTTGGTAGGTTAATGAAGCCTAGGCGTCCTCGAGCTGTTGTTCTATGTCCCACAAGGGAACTATCTGAACAGGTAGCTTTAGGTTGACTTGGTTTTATTACATTCTCTGCTATATAATTTTATACAGTATCCTATTAACGTCAAATGATTACAATAGGTGTTTCGTGTATCAAAATCTATCAGTCATCATGCACGATTTAGGTCTACCATGGTAAGTGGTGGTGGTCGGCTAAGGCCACAAGAGGACTCATTAAGTAATCCAATAGACATGGTGGTGGGGACTCCTGGGAGAGTCCTTCAACATATTGAGGCTGGCAACATGGTGTATGGTGACATCAAATACTTGGTGCGGACCTAATATTGTGGTTTTGATTTTGCATTCAGTCCAGAATTATTTAAGTTCCCTGATATTGTTGTCAAGTATATATGTTGCATTGATTTTGTAATTTTTTCTTCAAAATATATACTATGCCATTGTGATTGTGATATGTCATTTTAGTAGGTGCTCGATGAGGCAGACACCATGTTTGATCATGGATTTGGACCCGACATCCGCAAGTTTATTGGCCCATTAAAGCATCGTGCTTCATCACATGATGACCAAGGATTCCAAACTATATTAGTCACTGCAACAATGACAAAGGTATTCTTAGTTGCTGTTGTGAAATCATTAATTCAAGGAAAAATATGTAATAGTCTAAATGTTTAGACAGAACCATCATGGGTTGGTCTAGTAGTAAAAAAGGAGACATAGTCTCAATAACTAACCAAGAGGTCTTGGATTCAATCCATGGAGGTCACCTACTTGGGAATAAATTTCCTACTAGTTTTCTTGACATCTAAATGTTATCGGGTCAGGCGGGTTGTCCTGTGAGATTAATCGAGGTGTGTGTAAGCTGGTCCGGGCACTTACGAATATAAATAAAAATTCTAAATGTCTAGACGTATATTAGTGATGAGAGATCCAACAATGAATAAAGCACACAAAATTGATAACCCAGTTCAACAAAACTATGCCTACATATGGGGAACAAACTCGTCCAATAAGGAGTAATATTGATAATCAATAGTGTTAAATTTACAACAACACTACAAGGATTGTATTACACTATTGAATGACTTGAGATCTCCTTAAGACATGCCTCCATCATCTTGAAGATTATCTTTGTTTAGGCTCCCCTAAACTCAATATTCTTCTTTTTCGTAGAATCACACATTGAAACTCTCCCTCAATGTCTTCATCTCCTTTTCACGCCATCTGCAAAAAGGTGTGGCTCCACCAACAAGGTGCCACCCTAAAAAACTACTAAGCCTAAAAACCAACACAACCAACTACTAATTGGAAAAGTACAAAATAAGACAAGATATATTATCATAAAGTCTTACAAATATGACAAAAAGGAACAACACCTATAAAACCAATAAAGGAAAATTTGAAGCCAATTATCAATCAAGGAGCACTATCAATTTCAATTTCGATGTAATAGAATCTTTTTCTCCCTGTTGAGATCATATTGTTCTTCGAATCTGTATGGATTGATAACTTTGAGAAAAAACCCAAGGTAGGCATGCTGAACCTGATGGAACCTTTCTTTGTAATTGCATTGATAAAACAATGTTAAAGTTCTTTGAATCCTTTTGACAATATGTTCTATATGTGAGATCAGTTTCCTTTTCTACTTTCTAGTTGAGTCATTCGGTTAGATTTACAATTTCAGCATTTCTTGTTTCATTATACATTTTGGTTATTAAAATTCTCCTGCTCATTCGGTCTGGCAATTGCTGCAGGCAGTTCAAAAGCTGATTGATGAGGAGTTTCAAGGCATTGTGCATTTACGTACATCAACTTTGCATAAAAAGATTGCATCTGCTCGTCATGATTTCATCAAACTTTCTGGTTCTGAAAACAAGCTGGAAGCCTTATTGCAGGTCTGACTATGGTATTCTTTTTCTTGGGTACTTATTAGTTTGGTTATGGACGTCCTGATAAATATTAGCTTAGATTCTTAGACCGCGTTCTCTTTATTTCCATGAAGTTCATGGTTTTTTTGTTGGTTTGTGCATCATGCCCTCTTCACAACTAGGTTAAGAAATAGGGAAATTTGCCCTCTTATTACTAGATTCCTGGTTTATAAAGCATGGTTCAAGTTCTATAATGAGCACAACCTTCTGTTTAGTTGAATCACTGGGAGGTGGAGCCCTTGCTAAGCTGGAAGAAGGTGAATATGTAATATGTTGTCTAATGATCATGTTTCTTTTGCCCAGATGAAGGGTTGATTGGATTGTATTGGAAGTAACGACAAAAAACGAACACAAGATTTACGTGAAAACCCTAGTATAGGGAGAAAAACCACAGTGGAGAGATTTCTTATTATTTACTTGTGCAATAAATAATACAAGAGGTGAAGATTAATAGGCAATGAGAGCCCAAGTTAAAAAAGAAAAGAATAATTAGGGTTACATAAAATACAAGAGATGTAACACCCCCTCTTCGATCACCTACTCTCGACTCGAGATGGCGTGAAGTCAACCGACATCGTTCCCTTCTGAACAATACCAGTTGACCCTGACTACTGAACCTTTTGGAATGCTGAAGATCTTAAACAAATTTAAAACTTACGCAGTGGACTAACACAACGTTTATAGATTAGATTTATTAGACTTTATTACATAAACCTCAAAATAAGTTAAAGCTAAGTGCCATTTAGTACAGATGACAGTTAAACCAAAAGAAAACTAAACAACTTGACTAACTTATCTTTACACAAATGTACATGATATGGCTTTACCTTAAGTGCTAACCAAGAGTAACAAAACCTATTACCAAAACTAGCACAACAAATTGGAGACAATGATTAGGCTCTCAGATCACGATCTATTCCTGGAAGGTGGGAAAACATTTGGAAAGGGTGAGCTAAATAGCCCAGTGAGTGATGGTTTTAAAAATATACTTTTGAAATAGCAAGTCTTAAACAATTTACTCTTTCACATAAAAGCATATCAATCTTGAAATATTTATCTCAAAGTTACTCATTCAGTTGCTATCCCCGGAAGAACCACCGAGACGAAAACAATAAACTAGAGATGATAGCCCTATCTCGTTATAGCTACAATGAGATGGGAAACTAGGCATTCGTACAGGCTCTCATCTCTTGAGATGGGAAACTAGGCATCTGTAGACCCTCATCTCATTAATGTGTCATAGTGATAGGAAACTCCTAGGTATCTACTGAATACGCTCATCAAAGGAACCTTTGTGCACATGCAATATCCCTCAAATGGTTGCTGTATATATCTAGAACATTGGAGGTATAGTCTAAAACATGCTACAATCAACTTAAATAATTTGGAAACTTATCATAAACATATTTGCTTGTAAATTTTGTTAACAAATACCTGCTTTGTCAAAGCATCTCTAATCTCATGCTTTAAACATTTGATAGTAAATCATGTTTAGAAAATCAACTTAAAATTGTTTTGTCACTCATAGATGGTAGCTTAAACCCTCGCTTGTAAATTTCTCCAATCTTCTCTTGATCTGAATTAATGGGAAATAATTCAATTTAATTCCCTTTAATCATAAAAATATCAAAACATTACTTAGAAATGGAAAAAATATAAAAAAAACGGCCCAAAAATGCCCTTTGGCATTGGTTGGCACGCAAGGATGGGCAGTAGAGGGGGCTGGCGTGCGCTGATGGGCGGCAGAGGGTGGGGGGGACTGCGCGCATGGCCCTGAACTGCGCTCTAACCTCACCCGCGCACCTGGTGCCACACGCGCATGGCCCTTGTTGCTTGGCCTCCCTATGTCATGCCTAAAAACTGGATTCTTAGCAAGAATCCTTCTTCCAACTTTGGAGGCTAATAACTCGCAATCAAGAACTCAAATGACAAAACTTCCTTCTACAAAGTTGCTTAGAATTGTCTTAAATATCTTACCTCAAATGTTCAACTCCAAATTCTAGAACGATGTGCTCTGTAGCCCTTTAGAAGTGCACCTTGTTCAGATTGCTCTCAAAACTAACCCTCCTCCCTTTTCTCAACTCAAACTCAAGCCTCCTTTGCTGAAATTCGTCTGGTAGCCTCAATCTAAAAACTAGACTCAATTTGTGAGGTTTAGCAAATGGAAACAAGGACATGGCACGAGTGGATGTGATGCTCTTCTCCTTTAAAGCTTCCCTATTTGTAGAAAGGCTGCATGGCTTGAGATTGACATCTATCACCTACTTTAAGCATGCATGCCCTAGTCTTGACACCCATTCCTAGTCTATCTAGGCTTTTCTTAGGTGGTTTGCATGTTCTCCATCTCCTACTTAGTTTTTTTTGAAAAGGAGACAAGCTTCTTTATTATTAATAAACTCAATGTACAAGAGAGCTATACAATGAGAATAATAGGGAAGCCAAGAAAGAGGGGAGAGAGAGAGAGAGAGAGAGATAAATGGAGCTAGGATCAGTAGGTGCACTCGGACATCTCAACTAGGTTGACACCCCCATGGCACCCTCATCATATTCAAAATACAAAGAAAAGACCAAAGTACAAGAACAATACTAAGGTCATGAAAAGATCAAAGTAATGACCAAAATAACAACAGAAGCTACCTACAGTGGTTTGCATGTTCTCCATCTCCTACTTAGTAGTAACAAAACATCTTGTCATGCCAGGCGTAAGTCCCTTTCTTTGATTTTTCTTCCCTTCCATACCATGCTCATCCCAAATTTATCATCTAGCCCTGTTCCTTGACTTCTTTTTTTGATCTCTTAAGTTTCCGTTATACTTCAATCCCATGACAACGTGCTTTCTATGATATTTGGAAAATACCGCTCAAATGCCCTTTTTAACTAAGTTTTGAAGTAAAACTCCTTTTTAGCCCAAAATCACCATGTTTGTCTTTAATTCGACCATAAATACTAAAAATCTCGATACAAAATTCTTTTCCTACTCATTTTTACCAAAATACATCCTTAACCTCCCTGGAAATTTTGAAATTTACAGAATACTAAAAATTCCCTAAAAACTCGGGAATCGAAGTTTATAAGAGAACCCTTGGGCTTTCAACACACAACAAGCCCACTAACTCTAACACTCCCTCTCAAGTTGGGACATAAATATCAATAAGACCCAACTTGCTAACATAGGAACCAAGGTTTTGTTTGCGAAGCCCTTTGGTGAGAATGTCAGCAACCTGTTAACTGGAGGAAATGTAAGGATGCATATGCTACCATTGTCCAATCTTTCTTTAATGAAGTGTCTATCAATCTCCACATGTTTGGTTCTGTTATGTTGAACTCGGTTATTAGCGATGCTAATAGTGGCCATATTATCTCAAAATAATTTCACAGACACCTTATAGTTCTGACAAAGATCAGATAATACCTTTTGTAGCCAAATCTTTGTACATATTCCCAAAATCAGCCCTATACTCAACTTCAGCACTGCTTTTAGCCACAACCCCTTGCTTTTTACTCCTCCAAGTTACAATCTTTCCAGGCTTAGAGACTTTCGTAAACAAAGTATGATCAAAGTGCCCCTGACTAATCCTTGGGACTTGATGAAGGTTGTAAATTGTCAAACCATGCTTTTGGCAATTGTTTCAACCATACAAGGATTTTTTAAGCTTGCAAGCCCGATGGTCAAACTAGGCTTCAAAGCCTGGAGGGGGCTCATATAAACTTCTTCTAAATCTCCATTCAAGAACGTGTTCTTAATGTCTAGTTGATATAAGGACCAATCTTTATTCATAGCAACAGAAAAAGGACCCTAACGATATTTAACTTTGCAACAGGAGGAAAAGTCTCAGAGTAGTCGATCCCAGAAGTCTAAGTAAACCCTTTTGAAACTAAGCTGGCCTTGTGTCTGTCTAGAGTTCCATATGCTTTGCACTTGAGTGTAAACACCCATTTACATCCCATAGTTTTATGCCCCTTAGGGAGAGCATAGAGCTCCCAAGTCTTGTTCATTTCAAGTGCTCTCATCTCCTCATTGACTGCAGTTTTCCACTTAGGGCACTCTAAGGCTATGTGGATGTTCTTAGGTATCGTGGTGGAGTCAAAATTGGTTGTAAAAGCTTTGAATTGGGGAGATAAATTATCGTAAGAGACATAGTTATAGATGGAATATTTTGTGCAGGACCTGGTACCTTTCCTCAGCATAATAGGTACGTCAAGAGACGGATCATACTCATCAAGGTTACTTGAATTATCCTGTTTAGCCTCATCAGCTACCGTTTCTGCCATGATTTCAATCTCATCAACATTGCCTTTTTCACCCATATCTTCAGGAACAACTATATTTGACCTATTATTCTCACCCATTTTATTGTCGACATATGAATCAATAGAATTAATCATACCTTGATCTCATGATGGTTTAGAATCTTGGACAAGAGCCTGCTGAGCAGTAGGGGAACCAACTTCCTTTATGAGATTCATCCTATAGTTGGTTATCCAGGGAACTTGGTTTGTAGGTAAGACCATGTTATGAGGATCGGGGTCAGGTAAGGGTAAGGTAACAAGAGTAGGATTGGTAGACTTTAAGGGAAACTAGGCTCTTCACTCACATTCTTCCCCCGAAGCAGGCTAACGGGAAAGAAAGGACGATCTTGAAGGAAGGTGATATCGATGGAGATAAAGTACTTACGGGATGGATGATGGAAACATTTATAGCCCCGTTGATGGAGAGGGTACCCAACGAACACACAAGCTTGGGCCTGAGGGGTGAACTCATTCTCGTTAGGGCCATAGCTATGAATGTAGGTTGTGCATCCAAACACTTGAAGGGGAACATCAGGAATGAGACGGATAGAGGGATAAGACTTCTTGAGACATTCTAAGGGAGTCTGGAGGTGGAGTAGACAAAAGGGCATCTGGTTGATAAGATGAGTTGCAGTAAGAACAACATCGTCCTATAGATAAGAGGGAAGGGTAGACAACATAAGGGAACGAGCTACTTCCATGAGGTGACGATTTTTTCTCCCGGCAACTCCATTGTGCTGGGGTGTAAGCACATAGGGGGTTAATCCCTTTGGAGGACAGAAATTCATTAAGGGTATGGTTTTGGAACTCACGACCATTCACTCTGTAGAATTGCAATTTTTGCATTGAACTGCATTTCTACGGTGTGATAGAAGTCCTGGAATATGGAAGTGACCTCAGATTTGTTGGAGATGAGAAAGATCCCGGTAAGGCGGGTATGGTCATCAATGAAGGTCATAAACCACAATTTTCTAGGAGAGATAGTAACCTTGGATGGTCCCCAAACATCACTATGGATAAGGGTGAAAGGTTGGGTTGGTTTGTATGGTTGTGAGGGAATGAAGACCGGATGTTGTTTAGCCCGAAGATGCACATCACAAGATAAGGTAAAAACATCAACTTTAGAGAAGAGATGGGGAAATAAATGTTCTATACATTGAAAATTTAGGTGGCCCAAACGGAAATGTCACAACATGCAGTCTTTTTCAGAAGTAGTAAAGTACGAAGATACAAAACTAGTCCTAGAAGTGCTACTAGAGGAAGCATTATTGTGAAGGAGGTAGTGTCCCCTATTGCGTCGATTAGTGCCAATCATCCTCCTCGAGCTCAAGTCTTGAAAGAAACCAAATAATGTAAGAAAGTTGCTTTGCAGTTCAGCTCACAGTACGTAAATGTAAATGTAAATGTAACTCGTTGTCCAAACAACTATTCAGAGTTCCTAGAGCTCCTTGTAAGGCTTGTTGGAAAACCTGTTGTCGTACTTGATTAATCGCTTTTTGTTGTTCAAAACGAATAGTTTCATTTTTATAATTTTCTAATTGTTCCAAACTTTTAGAAGTTGAATTAATCAAATTCAATTTTTCTCGTTCTATCTCAGAATATCCATTCATTTGAAAATCTTGCTTATAGGTGGAAAATTATAAGAAACTTTGGACATGTGCAATACATTCTATACGGGCAGGTCCTTCGAAGAGAAAAAATTCCCCCTTCCCAGCAATGTGGGCCAAGGAACGATCTGCAATTCTAATTTTTTCTTTACTGGCACAAGGGATATAAAAAACAAAATTCTCAGAGAATCTTGTTAGATGATCTGTGGCATTAAATCCAGGGATTCTTTCCATCAACACTAATAAGATTGAGGGATTGAGGCGTGCCTCACTGATCAATAGCTCCTAGTGTGGAAGGACTAGAATCGTTCTGGTTTCCAATGAGACCAGATGGTTGAGAGGTACCAATAGACTCACATAAGCTCGTCCTGAATTTTGTTTGTTGTTTGGAGGACGTTTCTTGCCTTATAGGGGGACGAGTATGTAATTTCCAACACTGTTATTTGGTATGCCATTGTTTCTTGCAATGATCATAGATAGAGACTGATTTTTCGTTTTGCTTCTCACTTCATGAGTAGAGAATCTTGCACTAAAGGCAACAAAATCAATGGCAGGAGTGGTCAGAATGTTTGTAGCAGTCATATGGTTCTCCTCAACGCGGACTTTAGAGCATACCTTCATTGGGGAGGGAATAGGTCTCTGGCTCTGTATACAACCACGAACTACATTGAACTTCAAGTATAGGCCAGCAAGAAAGCATATATTTTGTCAACCTCTTCAAGTCTTGAGTGTTGTATGCCATCACCAGGATAGTTCCAAACAATTTCTTTACAAAGATCCATTTCCTACCAAATGAGAGGACGTTTGTTAAAATAGGATGTGACATCCACAGTTCGTCCCCTGCTTGCACTCATGGATTTGTTTTCTCAGAGTATAGAGACGAGAGGCATTTTGACACTTCGAATAAAGTTTCTAAGTTGTGCCCCATATATCCTCGACAGTCGAAGCATACAACAAGGGCTTGCCAATCTGTGGCTTCGTACTGTTGATTAACATGGCCCGAACGAGAGAATCTTCCCCTTTCCAAAAACGTTCTTGGAAATCACCTGGTGGAGAGGTAGGTATCTCTTATGTTAGAAAGCTAAATTTGTGGCGCCCCTCTAGGATCATTTTAGCGGATTGTGACCAAGAGAATTAGTTCTAACCATTCAGTTTCTTCCCTGTAAGGACTTCTGTAGTTTGTGCCATAGAACCAGACACGTTAGTGAAGGCAAGTTAGGGAATGATTTACCGGATTCTCATAATACGTTGGTGAGTTGGTTGGGATGCCAAGACTAGATGTGTGTGTAGGGGCTCCAATGGCTACCTCAAACGCTGCAAGTTGTTGTTGAAACATAGCCAATTGTTATTGGGTGGTATCTTGTACTTTTGGTTTGGATTGGGCCGAGGACTCACCAACTTCAAATTCTGATTGGGTATGGAAGTTACTGACATCGGGAGGACCGTTGGATAGAGTTTCCGGTAGGACATAATGTTGAGGAAGAAGTTGGTTTGGTTGACCTAGGGTTTGCGAGTGCACTAAGGGTGGTAGGTTCATGTTTAGTGTTTGCAGCAACGGTGCAAAGGCAGTGGAGTGGCTGGTTTTGCAGCGGTGGCTCAAGCGCAGTATAGGGATTTTGCTGGGTTTGCTGCGGTGCATAGACAGAAGGGTTCAGTGGTGGCGCATTTGACTGGGAAGGAAGCTGCGACGTGTGTGGTTGGAGGAAAGTACCGGCCAATGTGGTCTAAAGGGTGTGCAGCAGGTTGCCCATGGCGGCGTTGATACCAGCGGCTGTCTTGTCGGCAGTGTGGTTTTTTTTTGTTTGGGTTCCATCAAGATCGGTGTCTAGGGTTTCGTCATTATTCCTCTCTTATACCATATTGAAAGTAATGACAAAAAACAAACACAAGACTTGCATGAAAACCCTAGTACACCCTAGTACAGGGATTTCTTAATATTTACTTATGCAACAAATAATACAAGAGTGGAAGATTAATAGGCAACAAGAGCCCAAGTTAAAAAAGGAAAGAATAATTAGGATTACATAAAATACAAAAGAAGTCTGGGCTTTCAACACATAACAAGCCCACTCATTCATGAAAAGAGGGTGGAAGTCTTGAAGATCATATAATCTGCTTGGATTATTGCACTGACCTTCATATTTGTTATTTTGTGATGGTGCAGGTTCTTGAACCAAGTTTGGCAAAAGGAAATAGGGTAATGGTTTTCTGCAACACTTTAAATTCCAGCCGTGCTGTGGATCATTTTCTTGGTGAAAATCAAATTTCTACAGTCAATTACCATGGAGAAGTACCTGCACAGAAGAGGTAAGGAATTTCCATGAACTCCATTGCAATCTTATAAAATATACTCTACTTATTGACAATGTTTCTAGCTGTTTCTTGACGTTCCATTTGGGCTGCATTTAGTGTACTGGATTGCTGAGAGTTTTTTTTTTTCTGAAGAAAACATACATTTTCGTTGCTGATATCAAAGATTGTAAAGAAACTGCAGAGACGTACATGAGAAAAACTGCAAAGAAATTCAGATTTTCATGTGCATAGATATATTTTTGTCTACAATCACCAAGAAGCAACAGATTTAAACCTGCAGCAAAGTTTCCCCATTTATTGTTTTAATACTTTCTGAGTAATGAAATTAGATACTATACTGTTTTAATACTGTCAGAGGAATGAAATTAGATCTCTGAACTTGAAGTAGGAAAAAAGAGCAAATGAAGATGTTTTTTAGACCAGTCATCGTAGGACTTGAGTACAAATGTCATACCCATGATTTGAACATATGTCTTTTGAAAATCAGGGTCGAGAATCTCAAGAAGTTCAAGAGTGATGATGCCGATTGTCCTACATTAGTTTGCACAGACTTGGCTGCTAGAGGACTGGACTTGGATGTGGATCATGTCATCATGTTTGATTTTCCTTCAAATTCTGTAGGAGTTACTATCTTTTGAACAGTTTGGATTGTTTATTTTCACTTCTTTCTGTGGCTATACTTTTTATTATCTTGCCTAATTAGCTTGTAAATGATTTTTTGTTTTGCCTTTTAGATCGACTACCTTCATCGCACTGGAAGAACAGCTCGTATGGGTGCAAAAGGTTTATTGCTTGCTCTATGATGTACTTGATATTTTGTAATTCTGTTATTTCACATGGATTTAAATATATGTCTACTCGTTGGGTGACTAGGAAGGAAAATACTTGAGCCTAACCACGAAATCAGTAGGAATGTGTCAAAATTCAATAACTGAATTTCCAAATCGAACTATAAAGGAATAAGTGCGACTATCAAATTGAGCTTCACTCAATGGTAATTGGCATTACCTTTCGTTTCAATCCCCTGTCTCCACTTTTGTAAATAAAATAAGTAGCAAGTGTGATGAGAAGAATGGGGACCTACAGAAGTAAGTAGCCTTATCCAACCATAATAATTCTTATAGCCATTAGTCTAAATTAATTTATTGATTGTGTTATCCCCAAAAAAAAAAGTAATAAATTTATTGAAGGTATAAACTTCACCCTTTCCACATGTTAAGGTTGAATTTGATGAATTAGAAATATTAGGTAGAATTAACAGTTTGACACAATAAGGTGGAAATTTTTTGAGCTAAATTACTTAACTTTGAAGTTTGTGCTTATTTAATCTTTGACTTATGAAGTTCTGATAATTCACAGATCTATTAGACACGTGAACTTCCTTTCTAACCGTCATTGTTTGTACATTTGTTGTAGGAAAGGTGACGAGCCTGGTTGGTAAAAAGGACAATATTTTGGCTACTCGAATAGAGGAAGCGATCCGGAAAAACGAGAGCTTGGAATCCCTCACTGCAGATAGCGTGTGGAGAGACGTTGCACGGAATCGTATAACAGAGCATAAAACAAAAAATGCAAAACTGATCAAGGCTTCAACTGGGAGAAGTGGGGCTAAATCAGCAACATCAGCGCCAAAATCTTCAAGTGTCCATTCAAAAGGTGAACCTGGAAAAGCATCATATTCAGAAAGGACTCGGAAGCCTGGTGTTTCAGTTTCTAAGCCTGTAAAATCCTCGAGGAACATCCCAAGAAAACCATCTTCTGAAACAAAGAAGCAAGTGGCTAGCAGAAAGCGGCCTGGGAGTGCCATCAAATCGTCAGGTCAGAAACTAAATGTAGTTGGATTTAGAGGCCGAAGCAACCAGTCTGGTAATAGACGATCAGTATCCAGTTAA

mRNA sequence

ATGGGAGGCACAGGAAGGACTCTCCTTTCGCTTTCAGTCTCCACAAACCTCTTAATCAGTTCTCGTCTTTCACCTCCCAAATGTCTTCCCCTCCTCAAAATACCAAAACCCTTCAGAAATTTCTCAGGATTTAGGCCTATTTCCTCTGCTACCGCCGCCACAACCTCCACAGAATCCACGGAAACAATCCAGGTGATTGAACCCTTGAAGCATTCTCAACTGCTTGAGAGGCTGAGGACTAGACATCTCAAAGAATCTGCTCCTAAAACCAAGCCAACCAGAAATACTCTGTCCCAGTCTGTGGGAAGTGCGGAGGATGAAATGAAGAAGTCTGAAAAGAAGAAGAAGAAGTTGGATGAAAGTTTTGAAGAGTTGGGTTTGAATGAGGAGGTGATGGGGGCTGTGAGGGAGATGGGCATTCAGGTTCCTAGTGAGATTCAGTGCATTGGAATCCCAGCTGTTTTGGAAGGGAAGAGTGTGATTTTGGGTTCGCATACTGGCTCTGGTAAAACTCTGGCTTACTTGCTACCCCTTGTTCAGTTGCTGAGGCGAGATGAAGAATTGTTTGGTAGGTTAATGAAGCCTAGGCGTCCTCGAGCTGTTGTTCTATGTCCCACAAGGGAACTATCTGAACAGGTGTTTCGTGTATCAAAATCTATCAGTCATCATGCACGATTTAGGTCTACCATGGTAAGTGGTGGTGGTCGGCTAAGGCCACAAGAGGACTCATTAAGTAATCCAATAGACATGGTGGTGGGGACTCCTGGGAGAGTCCTTCAACATATTGAGGCTGGCAACATGGTGTATGGTGACATCAAATACTTGGTGCTCGATGAGGCAGACACCATGTTTGATCATGGATTTGGACCCGACATCCGCAAGTTTATTGGCCCATTAAAGCATCGTGCTTCATCACATGATGACCAAGGATTCCAAACTATATTAGTCACTGCAACAATGACAAAGGCAGTTCAAAAGCTGATTGATGAGGAGTTTCAAGGCATTGTGCATTTACGTACATCAACTTTGCATAAAAAGATTGCATCTGCTCGTCATGATTTCATCAAACTTTCTGGTTCTGAAAACAAGCTGGAAGCCTTATTGCAGGTTCTTGAACCAAGTTTGGCAAAAGGAAATAGGGTAATGGTTTTCTGCAACACTTTAAATTCCAGCCGTGCTGTGGATCATTTTCTTGGTGAAAATCAAATTTCTACAGTCAATTACCATGGAGAAGTACCTGCACAGAAGAGGGTCGAGAATCTCAAGAAGTTCAAGAGTGATGATGCCGATTGTCCTACATTAGTTTGCACAGACTTGGCTGCTAGAGGACTGGACTTGGATGTGGATCATGTCATCATGTTTGATTTTCCTTCAAATTCTATCGACTACCTTCATCGCACTGGAAGAACAGCTCGTATGGGTGCAAAAGGAAAGGTGACGAGCCTGGTTGGTAAAAAGGACAATATTTTGGCTACTCGAATAGAGGAAGCGATCCGGAAAAACGAGAGCTTGGAATCCCTCACTGCAGATAGCGTGTGGAGAGACGTTGCACGGAATCGTATAACAGAGCATAAAACAAAAAATGCAAAACTGATCAAGGCTTCAACTGGGAGAAGTGGGGCTAAATCAGCAACATCAGCGCCAAAATCTTCAAGTGTCCATTCAAAAGGTGAACCTGGAAAAGCATCATATTCAGAAAGGACTCGGAAGCCTGGTGTTTCAGTTTCTAAGCCTGTAAAATCCTCGAGGAACATCCCAAGAAAACCATCTTCTGAAACAAAGAAGCAAGTGGCTAGCAGAAAGCGGCCTGGGAGTGCCATCAAATCGTCAGGTCAGAAACTAAATGTAGTTGGATTTAGAGGCCGAAGCAACCAGTCTGGTAATAGACGATCAGTATCCAGTTAA

Coding sequence (CDS)

ATGGGAGGCACAGGAAGGACTCTCCTTTCGCTTTCAGTCTCCACAAACCTCTTAATCAGTTCTCGTCTTTCACCTCCCAAATGTCTTCCCCTCCTCAAAATACCAAAACCCTTCAGAAATTTCTCAGGATTTAGGCCTATTTCCTCTGCTACCGCCGCCACAACCTCCACAGAATCCACGGAAACAATCCAGGTGATTGAACCCTTGAAGCATTCTCAACTGCTTGAGAGGCTGAGGACTAGACATCTCAAAGAATCTGCTCCTAAAACCAAGCCAACCAGAAATACTCTGTCCCAGTCTGTGGGAAGTGCGGAGGATGAAATGAAGAAGTCTGAAAAGAAGAAGAAGAAGTTGGATGAAAGTTTTGAAGAGTTGGGTTTGAATGAGGAGGTGATGGGGGCTGTGAGGGAGATGGGCATTCAGGTTCCTAGTGAGATTCAGTGCATTGGAATCCCAGCTGTTTTGGAAGGGAAGAGTGTGATTTTGGGTTCGCATACTGGCTCTGGTAAAACTCTGGCTTACTTGCTACCCCTTGTTCAGTTGCTGAGGCGAGATGAAGAATTGTTTGGTAGGTTAATGAAGCCTAGGCGTCCTCGAGCTGTTGTTCTATGTCCCACAAGGGAACTATCTGAACAGGTGTTTCGTGTATCAAAATCTATCAGTCATCATGCACGATTTAGGTCTACCATGGTAAGTGGTGGTGGTCGGCTAAGGCCACAAGAGGACTCATTAAGTAATCCAATAGACATGGTGGTGGGGACTCCTGGGAGAGTCCTTCAACATATTGAGGCTGGCAACATGGTGTATGGTGACATCAAATACTTGGTGCTCGATGAGGCAGACACCATGTTTGATCATGGATTTGGACCCGACATCCGCAAGTTTATTGGCCCATTAAAGCATCGTGCTTCATCACATGATGACCAAGGATTCCAAACTATATTAGTCACTGCAACAATGACAAAGGCAGTTCAAAAGCTGATTGATGAGGAGTTTCAAGGCATTGTGCATTTACGTACATCAACTTTGCATAAAAAGATTGCATCTGCTCGTCATGATTTCATCAAACTTTCTGGTTCTGAAAACAAGCTGGAAGCCTTATTGCAGGTTCTTGAACCAAGTTTGGCAAAAGGAAATAGGGTAATGGTTTTCTGCAACACTTTAAATTCCAGCCGTGCTGTGGATCATTTTCTTGGTGAAAATCAAATTTCTACAGTCAATTACCATGGAGAAGTACCTGCACAGAAGAGGGTCGAGAATCTCAAGAAGTTCAAGAGTGATGATGCCGATTGTCCTACATTAGTTTGCACAGACTTGGCTGCTAGAGGACTGGACTTGGATGTGGATCATGTCATCATGTTTGATTTTCCTTCAAATTCTATCGACTACCTTCATCGCACTGGAAGAACAGCTCGTATGGGTGCAAAAGGAAAGGTGACGAGCCTGGTTGGTAAAAAGGACAATATTTTGGCTACTCGAATAGAGGAAGCGATCCGGAAAAACGAGAGCTTGGAATCCCTCACTGCAGATAGCGTGTGGAGAGACGTTGCACGGAATCGTATAACAGAGCATAAAACAAAAAATGCAAAACTGATCAAGGCTTCAACTGGGAGAAGTGGGGCTAAATCAGCAACATCAGCGCCAAAATCTTCAAGTGTCCATTCAAAAGGTGAACCTGGAAAAGCATCATATTCAGAAAGGACTCGGAAGCCTGGTGTTTCAGTTTCTAAGCCTGTAAAATCCTCGAGGAACATCCCAAGAAAACCATCTTCTGAAACAAAGAAGCAAGTGGCTAGCAGAAAGCGGCCTGGGAGTGCCATCAAATCGTCAGGTCAGAAACTAAATGTAGTTGGATTTAGAGGCCGAAGCAACCAGTCTGGTAATAGACGATCAGTATCCAGTTAA

Protein sequence

MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTESTETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSGAKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASRKRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS*

Homology

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BLAST of CsGy7G011550 vs. ExPASy Swiss-Prot
Match: Q56X76 (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2)

HSP 1 Score: 750.7 bits (1937), Expect = 1.3e-215
Identity = 420/630 (66.67%), Postives = 497/630 (78.89%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           M G  RT+LSLS+S++L   S++  P   P L++ KP R    FRP+ SA AATTS+ +T
Sbjct: 1   MVGASRTILSLSLSSSLFTFSKI--PHVFPFLRLHKP-RFHHAFRPLYSA-AATTSSPTT 60

Query: 61  ETIQVIEP--LKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKL 120
           ET  V +P  LKH+ LLERLR RHLKESA   KP +   S  VG  E+      KK KKL
Sbjct: 61  ET-NVTDPDQLKHTILLERLRLRHLKESA---KPPQQRPSSVVGVEEE--SSIRKKSKKL 120

Query: 121 DESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPL 180
            E+F+ELGL+EEVMGA++E+ I+VP+EIQCIGIPAV+E KSV+LGSHTGSGKTLAYLLP+
Sbjct: 121 VENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPI 180

Query: 181 VQLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLR 240
           VQL+R DE   G+  KPRRPR VVLCPTRELSEQV+RV+KSISHHARFRS +VSGG R+R
Sbjct: 181 VQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIR 240

Query: 241 PQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 300
           PQEDSL+N IDMVVGTPGR+LQHIE GNMVYGDI YLVLDEADTMFD GFGP+IRKF+ P
Sbjct: 241 PQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAP 300

Query: 301 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 360
           L  RA   +DQGFQT+LVTATMT AVQKL+DEEFQGI HLRTSTLHKKIA+ARHDFIKLS
Sbjct: 301 LNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLS 360

Query: 361 GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRV 420
           G E+KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVPA++RV
Sbjct: 361 GGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRV 420

Query: 421 ENLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 480
           ENLKKFK ++ DCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGK
Sbjct: 421 ENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGAKGK 480

Query: 481 VTSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIK--AST 540
           VTSLV +KD +LA RIEEA+R NESLESLT D+V RD AR  IT+ K ++ K I+  +  
Sbjct: 481 VTSLVSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQ 540

Query: 541 GRSGAKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQ 600
             S  K ++S+P + S   K  P + S S    KP  + S P KSS+   +   +   + 
Sbjct: 541 RNSRDKPSSSSPPARSTGGK-TPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGSRS 600

Query: 601 VASRKRPGSAIKSSGQKLNVVGFRGRSNQS 627
           +A+R + GS  +  G+KL+VVGFRG+S+ +
Sbjct: 601 IAARGKTGSD-RRPGKKLSVVGFRGKSSSA 618

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BLAST of CsGy7G011550 vs. ExPASy Swiss-Prot
Match: Q5VRY0 (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 706.8 bits (1823), Expect = 2.2e-202
Identity = 390/592 (65.88%), Postives = 452/592 (76.35%), Query Frame = 0


Query: 48  SSATAATTSTESTETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDE 107
           + A+A T  TE  ET     P +H  LLERLR RHLK     T           G     
Sbjct: 39  AGASAVTAPTE-PETTAREAPSRHELLLERLRQRHLKGVPAATPRPAQREKGRGGGGGGA 98

Query: 108 MKKSEKKKKKLDESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTG 167
            +  +K++ ++ +SFEELGL EEVM A+ EMGI  P+EIQC+G+PAVL G SV+LGSHTG
Sbjct: 99  QELQQKRRVEVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTG 158

Query: 168 SGKTLAYLLPLVQLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFR 227
           SGKTLAYLLPLVQLLRRDE + G  MKPRRPRAVVLCPTREL+EQVFRV+KSISHHARFR
Sbjct: 159 SGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARFR 218

Query: 228 STMVSGGGRLRPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHG 287
           STMVSGG R+RPQEDSL+ P+DMVVGTPGR+L HI+ GNMVYGDIKYLVLDEADTMFD G
Sbjct: 219 STMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQG 278

Query: 288 FGPDIRKFIGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKI 347
           FGPDIRKF+ PLK+RA+   DQGFQT+LVTATMTKAVQKLIDEEF+GIVHLRT+T  K++
Sbjct: 279 FGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRV 338

Query: 348 ASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVN 407
           A+ARHDFIKLSGSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQISTVN
Sbjct: 339 ATARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVN 398

Query: 408 YHGEVPAQKRVENLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRT 467
           YHGEVPA++RVENL KF++++ DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRT
Sbjct: 399 YHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRT 458

Query: 468 GRTARMGAKGKVTSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTK 527
           GRTARMGAKGKVTSLV KKD  LATRIEEA++KNESLE+LT ++V R     + T  K +
Sbjct: 459 GRTARMGAKGKVTSLVAKKDVTLATRIEEAMKKNESLEALTTNNVRRAAVNPQYTSTKGR 518

Query: 528 NAKL-IKASTGRSG----------AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVS 587
            + L +    GR G           K  TS+ + S + S+          R++      +
Sbjct: 519 PSALKVVNQKGRRGVALQTKSSRIVKDTTSSRRRSPIRSQ---------PRSKSTSSGKA 578

Query: 588 KPVKSSRNIPRKPSSETKKQVASRKRP----GSAIKSSGQKLNVVGFRGRSN 625
           KPV+S++  P K SS + K   SR RP    G A+   G KL+VVGFRGRS+
Sbjct: 579 KPVRSAK--PSKSSSPSPKVAKSRPRPEGRKGDALNKLGSKLSVVGFRGRSS 618

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BLAST of CsGy7G011550 vs. ExPASy Swiss-Prot
Match: Q0DVX2 (DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0108600 PE=2 SV=2)

HSP 1 Score: 213.0 bits (541), Expect = 9.8e-54
Identity = 140/425 (32.94%), Postives = 224/425 (52.71%), Query Frame = 0


Query: 109 KKSEKKKKKLD------ESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVIL 168
           ++++++K  LD       SF+E+G ++E++GA+R  G   PS IQ +    VLEGKS I+
Sbjct: 223 RQNQRQKGPLDSGFFSRRSFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCII 282

Query: 169 GSHTGSGKTLAYLLPLVQLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISH 228
           G  +GSGKTLAYL P+VQ LR++E        PR PR VVL PT EL+ QV    +SIS 
Sbjct: 283 GDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISK 342

Query: 229 H-ARFRSTMVSGGGRLRPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEAD 288
               FRS + +GG R + Q +SL   +D+++ TPGR L  ++ G +   +++ +VLDE D
Sbjct: 343 SGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVD 402

Query: 289 TMFDHGFGPDIRKFIGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS 348
            ++         +    + H+  +      Q + VTAT+   +   + E F     +   
Sbjct: 403 ILYG-------EESFEQVLHQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGP 462

Query: 349 TLHKKIASARHDFIKLSGSE-----------NKLEALLQVLEPSLAKGNRVMVFCNTLNS 408
            +H+  +      +  SG +           NK  AL++++E S  +  + ++FCN + +
Sbjct: 463 GVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKKSALVKIIEESPVR--KTIIFCNKIET 522

Query: 409 SRAVDHFLGE-----NQISTVNYHGEVPAQKRVENLKKF-KSDDADCPTLVCTDLAARGL 468
            R V++ L       +QI  + +H  +  Q+R+ N+K+F     AD   LVCTD A+RG+
Sbjct: 523 CRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGI 582

Query: 469 DL-DVDHVIMFDFPSNSIDYLHRTGRTAR-MGAKGKVTSLVGKKDNILATRIEEAIRKNE 508
           D  +V+HV++FD+P +  +Y+ R GRTAR     GK       K   LA R+ E   K  
Sbjct: 583 DFANVNHVVLFDYPRDPSEYVRRVGRTARGASGNGKAFVFAVGKQVSLARRVMERNIKGH 638

[Close]

BLAST of CsGy7G011550 vs. ExPASy Swiss-Prot
Match: Q5B0J9 (ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp2 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.9e-49
Identity = 127/385 (32.99%), Postives = 201/385 (52.21%), Query Frame = 0


Query: 120 ESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 179
           E+F+E G  + V+  V+  G + P+ IQ  G P  L G+ V+  + TGSGKTL+Y LP +
Sbjct: 140 ETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 199

Query: 180 QLLRRDEELFGRLMKP-RRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLR 239
             +         L+ P   P  ++L PTREL+ Q+          +R R+T V GG    
Sbjct: 200 VHINAQP-----LLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKG 259

Query: 240 PQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 299
           PQ   LS  +++ + TPGR++  +EAG      + YLVLDEAD M D GF P IRK I  
Sbjct: 260 PQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQ 319

Query: 300 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 359
           ++           QT + +AT  K V++L  +     + +   ++           +++ 
Sbjct: 320 IR--------PDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVI 379

Query: 360 GSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKR 419
               K + +++ LE  +  +GN+ +VF  T   +  +  FL ++    ++ HG+   Q+R
Sbjct: 380 SEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQER 439

Query: 420 VENLKKFKSDDADCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAK 479
              L +FK+  +  P +V TD+A+RG+D+ D+ HVI +D+P+NS DY+HR GRT R GAK
Sbjct: 440 DWVLNEFKTGKS--PIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAK 499

Query: 480 GKV----TSLVGKKDNILATRIEEA 498
           G      T+   K+   L T + EA
Sbjct: 500 GTAITFFTTDNAKQARDLVTILSEA 509

[Close]

BLAST of CsGy7G011550 vs. ExPASy Swiss-Prot
Match: Q8GUG7 (DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana OX=3702 GN=RH50 PE=2 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 1.9e-49
Identity = 135/411 (32.85%), Postives = 220/411 (53.53%), Query Frame = 0


Query: 120 ESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 179
           ++F E+G +E++M A++E     P+ IQ +    V++GKS I+   +GSGKTLAYL+P++
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433

Query: 180 QLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHH-ARFRSTMVSGGGRLR 239
           Q LR +E        P  PR +VL PT EL+ QV    +SIS     FRS +V+GG R R
Sbjct: 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQR 493

Query: 240 PQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 299
            Q ++L   +D+++ TPGR    +  G +   +++  +LDE D +    FG D  +F   
Sbjct: 494 TQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDIL----FGDD--EFEAA 553

Query: 300 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 359
           L++  +S      Q + VTAT+   +   + E F     +    +H+   +     +  S
Sbjct: 554 LQNLINSSPVTA-QYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCS 613

Query: 360 GS-----------ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL-----GENQ 419
           G            +NK  ALLQ++E +    ++ ++FCN + + R V++        E Q
Sbjct: 614 GDDNAEKTPETAFQNKKTALLQIMEENPV--SKTIIFCNKIETCRKVENIFKRVDRKERQ 673

Query: 420 ISTVNYHGEVPAQKRVENLKKFKSD--DADCPTLVCTDLAARGLDLD-VDHVIMFDFPSN 479
           +  + +H  +  + R+ N+++F S   + +   LVCTD A+RG+D   VDHV++FDFP +
Sbjct: 674 LHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRD 733

Query: 480 SIDYLHRTGRTARMGAKGKVTS---LVGKKDNILATRIEEAIRKNESLESL 508
             +Y+ R GRTAR GA+GK  +   +VGK+   LA RI E   K   +  +
Sbjct: 734 PSEYVRRVGRTAR-GARGKGKAFIFVVGKQVG-LARRIIERNEKGHPVHDV 773

[Close]

BLAST of CsGy7G011550 vs. NCBI nr
Match: XP_004139692.1 (DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >XP_011659101.1 DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >KAE8646174.1 hypothetical protein Csa_016020 [Cucumis sativus])

HSP 1 Score: 1200 bits (3104), Expect = 0.0
Identity = 634/634 (100.00%), Postives = 634/634 (100.00%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST
Sbjct: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120
           ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE
Sbjct: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG 540
           SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG
Sbjct: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG 540

Query: 541 AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASR 600
           AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASR
Sbjct: 541 AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASR 600

Query: 601 KRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS 634
           KRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS
Sbjct: 601 KRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS 634

[Close]

BLAST of CsGy7G011550 vs. NCBI nr
Match: XP_008461901.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo])

HSP 1 Score: 1145 bits (2963), Expect = 0.0
Identity = 609/634 (96.06%), Postives = 620/634 (97.79%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGRTLLSLS+STNLLISSRLSPPKCLPLLKIPKPFRNFSGFRP+SSAT ATTSTEST
Sbjct: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120
           E IQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKK KKL E
Sbjct: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVP+EIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG 540
           SLVGKKD+ILATRIEEAI+KNESLESLTADSV RD+AR+RITEHKTKNAKLIKASTG S 
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTG-SR 540

Query: 541 AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASR 600
           AKSATSAPKSSSVHSKGE GKASYSERT+KPGV VSK VKSSRNIPRKPSSETKKQVASR
Sbjct: 541 AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASR 600

Query: 601 KRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS 634
           +RPGSAIKSSGQKLNVVGFRGRSNQ   RRSVSS
Sbjct: 601 RRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 633

[Close]

BLAST of CsGy7G011550 vs. NCBI nr
Match: TYK14098.1 (DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo var. makuwa])

HSP 1 Score: 1144 bits (2959), Expect = 0.0
Identity = 608/633 (96.05%), Postives = 619/633 (97.79%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGRTLLSLS+STNLLISSRLSPPKCLPLLKIPKPFRNFSGFRP+SSAT ATTSTEST
Sbjct: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120
           E IQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKK KKL E
Sbjct: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVP+EIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG 540
           SLVGKKD+ILATRIEEAI+KNESLESLTADSV RD+AR+RITEHKTKNAKLIKASTG S 
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTG-SR 540

Query: 541 AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASR 600
           AKSATSAPKSSSVHSKGE GKASYSERT+KPGV VSK VKSSRNIPRKPSSETKKQVASR
Sbjct: 541 AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASR 600

Query: 601 KRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVS 633
           +RPGSAIKSSGQKLNVVGFRGRSNQ   RRSVS
Sbjct: 601 RRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS 632

[Close]

BLAST of CsGy7G011550 vs. NCBI nr
Match: XP_038898304.1 (DEAD-box ATP-dependent RNA helicase 39 [Benincasa hispida])

HSP 1 Score: 1071 bits (2771), Expect = 0.0
Identity = 576/634 (90.85%), Postives = 597/634 (94.16%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGR LLSLS+STNLLISSRLSPPKCL LL+IPKPFRNFSGFRP+ SAT ATTSTES 
Sbjct: 1   MGGTGRALLSLSISTNLLISSRLSPPKCLSLLEIPKPFRNFSGFRPLCSATTATTSTESV 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120
           ET QVIEPLKHSQLLERLRTRHLKESA KT P      +SVG AEDEMKKSEKKKKKL E
Sbjct: 61  ETAQVIEPLKHSQLLERLRTRHLKESASKTMP------KSVGRAEDEMKKSEKKKKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
            FEELGLNEEVMGAVREMGI+VP+EIQCIGIPAVLE KSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 RFEELGLNEEVMGAVREMGIEVPTEIQCIGIPAVLEEKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFG+LM+PRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMRPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG 540
           SLV KKD+ILATRIEEAIRKNESLESLTAD+V RD+AR+RI E KTKNAKL+KAS+ RS 
Sbjct: 481 SLVAKKDDILATRIEEAIRKNESLESLTADNVRRDIARDRIMEQKTKNAKLVKASSERSR 540

Query: 541 AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASR 600
           AKS+TSA KSSSVHSKGE GKAS + RT+KPGV VSK  KSSRNI RKPSSE+KK VASR
Sbjct: 541 AKSSTSALKSSSVHSKGESGKASSTPRTQKPGVPVSKS-KSSRNIQRKPSSESKKHVASR 600

Query: 601 KRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS 634
           +RPGSAIKS+ QKLNVVGFRGRSNQS  RRSVSS
Sbjct: 601 RRPGSAIKSTSQKLNVVGFRGRSNQSDKRRSVSS 627

[Close]

BLAST of CsGy7G011550 vs. NCBI nr
Match: XP_022143665.1 (DEAD-box ATP-dependent RNA helicase 39 [Momordica charantia])

HSP 1 Score: 1026 bits (2652), Expect = 0.0
Identity = 554/638 (86.83%), Postives = 586/638 (91.85%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGRTLLSLS+STNLL+ SR+SPPKC PLLKIPKP R FSGFRP+ SATA TT TES 
Sbjct: 1   MGGTGRTLLSLSISTNLLLMSRVSPPKCFPLLKIPKPVRIFSGFRPLCSATADTTPTESM 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKK-LD 120
           ET QVIEPLKHS LLERLR RHLKESA KTK  R+TLS SVG AEDEM K+EKKKKK L 
Sbjct: 61  ETTQVIEPLKHSLLLERLRARHLKESASKTKQARSTLSPSVGGAEDEMNKAEKKKKKNLV 120

Query: 121 ESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180
           ESFEELGLNEEVMGAVREMGI+VP+EIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV
Sbjct: 121 ESFEELGLNEEVMGAVREMGIEVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180

Query: 181 QLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240
           QLLRRDEELFG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP
Sbjct: 181 QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240

Query: 241 QEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPL 300
           QEDSLSNPI+MVVGTPGRVLQHIEAGN+VYGDIKYLVLDEADTMFDHGFGPDIRKFI PL
Sbjct: 241 QEDSLSNPIEMVVGTPGRVLQHIEAGNIVYGDIKYLVLDEADTMFDHGFGPDIRKFISPL 300

Query: 301 KHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360
           KHRASSH+DQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG
Sbjct: 301 KHRASSHEDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360

Query: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420
           SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE
Sbjct: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420

Query: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKV 480
           NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKV
Sbjct: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV 480

Query: 481 TSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRS 540
           TSLV KKD ILATRIEEAIRKNESLESLTAD+V RD+AR+RITE KTK AKL++ S+ +S
Sbjct: 481 TSLVAKKDAILATRIEEAIRKNESLESLTADNVRRDIARDRITEQKTKTAKLVRVSSEKS 540

Query: 541 GAKSATSAP--KSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQV 600
            AKS+++A   KSSS+ S+G  GKA    +++K  V VSK V SSRN PRKPSS +KK +
Sbjct: 541 KAKSSSAAATTKSSSIRSQGSSGKAPSPAKSQKSAVRVSKSVDSSRNNPRKPSSGSKKPM 600

Query: 601 AS-RKRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS 634
           AS R+RPG AIKS+G KLNVVGFRGRSNQS  R+SVSS
Sbjct: 601 ASSRRRPGIAIKSTGPKLNVVGFRGRSNQSDKRQSVSS 638

[Close]

BLAST of CsGy7G011550 vs. ExPASy TrEMBL
Match: A0A1S3CFM7 (DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo OX=3656 GN=LOC103500395 PE=4 SV=1)

HSP 1 Score: 1145 bits (2963), Expect = 0.0
Identity = 609/634 (96.06%), Postives = 620/634 (97.79%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGRTLLSLS+STNLLISSRLSPPKCLPLLKIPKPFRNFSGFRP+SSAT ATTSTEST
Sbjct: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120
           E IQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKK KKL E
Sbjct: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVP+EIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG 540
           SLVGKKD+ILATRIEEAI+KNESLESLTADSV RD+AR+RITEHKTKNAKLIKASTG S 
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTG-SR 540

Query: 541 AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASR 600
           AKSATSAPKSSSVHSKGE GKASYSERT+KPGV VSK VKSSRNIPRKPSSETKKQVASR
Sbjct: 541 AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASR 600

Query: 601 KRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS 634
           +RPGSAIKSSGQKLNVVGFRGRSNQ   RRSVSS
Sbjct: 601 RRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 633

[Close]

BLAST of CsGy7G011550 vs. ExPASy TrEMBL
Match: A0A5D3CSB8 (DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00130 PE=4 SV=1)

HSP 1 Score: 1144 bits (2959), Expect = 0.0
Identity = 608/633 (96.05%), Postives = 619/633 (97.79%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGRTLLSLS+STNLLISSRLSPPKCLPLLKIPKPFRNFSGFRP+SSAT ATTSTEST
Sbjct: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120
           E IQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKK KKL E
Sbjct: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVP+EIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG 540
           SLVGKKD+ILATRIEEAI+KNESLESLTADSV RD+AR+RITEHKTKNAKLIKASTG S 
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTG-SR 540

Query: 541 AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASR 600
           AKSATSAPKSSSVHSKGE GKASYSERT+KPGV VSK VKSSRNIPRKPSSETKKQVASR
Sbjct: 541 AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASR 600

Query: 601 KRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVS 633
           +RPGSAIKSSGQKLNVVGFRGRSNQ   RRSVS
Sbjct: 601 RRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS 632

[Close]

BLAST of CsGy7G011550 vs. ExPASy TrEMBL
Match: A0A6J1CPE5 (DEAD-box ATP-dependent RNA helicase 39 OS=Momordica charantia OX=3673 GN=LOC111013516 PE=4 SV=1)

HSP 1 Score: 1026 bits (2652), Expect = 0.0
Identity = 554/638 (86.83%), Postives = 586/638 (91.85%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGRTLLSLS+STNLL+ SR+SPPKC PLLKIPKP R FSGFRP+ SATA TT TES 
Sbjct: 1   MGGTGRTLLSLSISTNLLLMSRVSPPKCFPLLKIPKPVRIFSGFRPLCSATADTTPTESM 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKK-LD 120
           ET QVIEPLKHS LLERLR RHLKESA KTK  R+TLS SVG AEDEM K+EKKKKK L 
Sbjct: 61  ETTQVIEPLKHSLLLERLRARHLKESASKTKQARSTLSPSVGGAEDEMNKAEKKKKKNLV 120

Query: 121 ESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180
           ESFEELGLNEEVMGAVREMGI+VP+EIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV
Sbjct: 121 ESFEELGLNEEVMGAVREMGIEVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180

Query: 181 QLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240
           QLLRRDEELFG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP
Sbjct: 181 QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240

Query: 241 QEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPL 300
           QEDSLSNPI+MVVGTPGRVLQHIEAGN+VYGDIKYLVLDEADTMFDHGFGPDIRKFI PL
Sbjct: 241 QEDSLSNPIEMVVGTPGRVLQHIEAGNIVYGDIKYLVLDEADTMFDHGFGPDIRKFISPL 300

Query: 301 KHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360
           KHRASSH+DQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG
Sbjct: 301 KHRASSHEDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360

Query: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420
           SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE
Sbjct: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420

Query: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKV 480
           NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKV
Sbjct: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV 480

Query: 481 TSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRS 540
           TSLV KKD ILATRIEEAIRKNESLESLTAD+V RD+AR+RITE KTK AKL++ S+ +S
Sbjct: 481 TSLVAKKDAILATRIEEAIRKNESLESLTADNVRRDIARDRITEQKTKTAKLVRVSSEKS 540

Query: 541 GAKSATSAP--KSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQV 600
            AKS+++A   KSSS+ S+G  GKA    +++K  V VSK V SSRN PRKPSS +KK +
Sbjct: 541 KAKSSSAAATTKSSSIRSQGSSGKAPSPAKSQKSAVRVSKSVDSSRNNPRKPSSGSKKPM 600

Query: 601 AS-RKRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS 634
           AS R+RPG AIKS+G KLNVVGFRGRSNQS  R+SVSS
Sbjct: 601 ASSRRRPGIAIKSTGPKLNVVGFRGRSNQSDKRQSVSS 638

[Close]

BLAST of CsGy7G011550 vs. ExPASy TrEMBL
Match: A0A6J1IQ01 (DEAD-box ATP-dependent RNA helicase 39 OS=Cucurbita maxima OX=3661 GN=LOC111477141 PE=4 SV=1)

HSP 1 Score: 1018 bits (2632), Expect = 0.0
Identity = 549/634 (86.59%), Postives = 579/634 (91.32%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGRTLLSLSVSTNLLIS+R+SPPKCL LLKIPKP RNFSGFRP+ SAT+ATT+ EST
Sbjct: 1   MGGTGRTLLSLSVSTNLLISARVSPPKCLSLLKIPKPIRNFSGFRPLCSATSATTNAEST 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120
           ET Q IEPLKHS LLERLRTRHL ESA KTKP        VGS E++MKK EKKKK L E
Sbjct: 61  ETTQAIEPLKHSILLERLRTRHLNESASKTKPV-------VGSGEEKMKKPEKKKK-LVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGA+REM I+VP+EIQ IGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGALREMNIEVPTEIQSIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIDAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHD QGFQTIL+TATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDGQGFQTILITATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENK+EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQ+RVEN
Sbjct: 361 ENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQQRVEN 420

Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKG VT
Sbjct: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGNVT 480

Query: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNR-ITEHKTKNAKLIKASTGRS 540
           SLV KKD+ILATRIEEAIRKNESLESLTAD+V RD+AR+R ITE K KN KL+K S  R+
Sbjct: 481 SLVTKKDHILATRIEEAIRKNESLESLTADNVRRDIARDRMITEQKMKNEKLVKVSKERT 540

Query: 541 GAKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVAS 600
            AKS+TSA K SSVHSK E GKAS   +T+K GV VSK  K SRN+PRKPSSE KKQV S
Sbjct: 541 RAKSSTSAAKPSSVHSKDESGKASSPVKTQKSGVRVSKLTKPSRNVPRKPSSEPKKQVTS 600

Query: 601 RKRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVS 633
           R++  + IK SGQKLNVVGFRGRS+QS  RRSVS
Sbjct: 601 RRQSRNGIKPSGQKLNVVGFRGRSSQSDKRRSVS 626

[Close]

BLAST of CsGy7G011550 vs. ExPASy TrEMBL
Match: A0A6J1F9C3 (DEAD-box ATP-dependent RNA helicase 39 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443261 PE=4 SV=1)

HSP 1 Score: 1013 bits (2618), Expect = 0.0
Identity = 550/635 (86.61%), Postives = 579/635 (91.18%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           MGGTGRTLLSLSVSTNLLIS+R+SPPKCL LLKIPKP RNFSGFRP+ SAT+A TS EST
Sbjct: 1   MGGTGRTLLSLSVSTNLLISARVSPPKCLSLLKIPKPIRNFSGFRPLCSATSAATSAEST 60

Query: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120
           ET Q IEPLKHS LLERLRTRHL ESA KTK         VGS E++MKK EKKKK L E
Sbjct: 61  ETTQAIEPLKHSILLERLRTRHLNESASKTKLA-------VGSGEEKMKKPEKKKK-LVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGA+REM I+VP+EIQ IGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGALREMNIEVPTEIQSIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIDAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHD QGFQTIL+TATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDGQGFQTILITATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENK+EALLQVLEPSLAKGNR+MVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQ+RVEN
Sbjct: 361 ENKMEALLQVLEPSLAKGNRIMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQQRVEN 420

Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKG VT
Sbjct: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGNVT 480

Query: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNR-ITEHKTKNAKLIKASTGRS 540
           SLV KKDNILATRIEEAIRKNESLESLTAD+V RD+AR R ITE KTKN K +K S  R+
Sbjct: 481 SLVTKKDNILATRIEEAIRKNESLESLTADNVRRDIARERMITEQKTKNEKFVKVSKERN 540

Query: 541 GAKSATS-APKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVA 600
            AKS+TS A K SSVHSK E GKAS + +T+K GV VSK  K SRN+PRKPSSE KKQVA
Sbjct: 541 RAKSSTSPAAKPSSVHSKDESGKASPA-KTQKSGVRVSKSTKPSRNVPRKPSSEPKKQVA 600

Query: 601 SRKRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVS 633
           SR++P + IK SGQKLNVVGFRGRS+QS  RRSVS
Sbjct: 601 SRRQPRNGIKPSGQKLNVVGFRGRSSQSDKRRSVS 626

[Close]

BLAST of CsGy7G011550 vs. TAIR 10
Match: AT4G09730.1 (RH39 )

HSP 1 Score: 750.7 bits (1937), Expect = 9.3e-217
Identity = 420/630 (66.67%), Postives = 497/630 (78.89%), Query Frame = 0


Query: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
           M G  RT+LSLS+S++L   S++  P   P L++ KP R    FRP+ SA AATTS+ +T
Sbjct: 1   MVGASRTILSLSLSSSLFTFSKI--PHVFPFLRLHKP-RFHHAFRPLYSA-AATTSSPTT 60

Query: 61  ETIQVIEP--LKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKL 120
           ET  V +P  LKH+ LLERLR RHLKESA   KP +   S  VG  E+      KK KKL
Sbjct: 61  ET-NVTDPDQLKHTILLERLRLRHLKESA---KPPQQRPSSVVGVEEE--SSIRKKSKKL 120

Query: 121 DESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPL 180
            E+F+ELGL+EEVMGA++E+ I+VP+EIQCIGIPAV+E KSV+LGSHTGSGKTLAYLLP+
Sbjct: 121 VENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPI 180

Query: 181 VQLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLR 240
           VQL+R DE   G+  KPRRPR VVLCPTRELSEQV+RV+KSISHHARFRS +VSGG R+R
Sbjct: 181 VQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIR 240

Query: 241 PQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 300
           PQEDSL+N IDMVVGTPGR+LQHIE GNMVYGDI YLVLDEADTMFD GFGP+IRKF+ P
Sbjct: 241 PQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAP 300

Query: 301 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 360
           L  RA   +DQGFQT+LVTATMT AVQKL+DEEFQGI HLRTSTLHKKIA+ARHDFIKLS
Sbjct: 301 LNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLS 360

Query: 361 GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRV 420
           G E+KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVPA++RV
Sbjct: 361 GGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRV 420

Query: 421 ENLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 480
           ENLKKFK ++ DCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGK
Sbjct: 421 ENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGAKGK 480

Query: 481 VTSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIK--AST 540
           VTSLV +KD +LA RIEEA+R NESLESLT D+V RD AR  IT+ K ++ K I+  +  
Sbjct: 481 VTSLVSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQ 540

Query: 541 GRSGAKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQ 600
             S  K ++S+P + S   K  P + S S    KP  + S P KSS+   +   +   + 
Sbjct: 541 RNSRDKPSSSSPPARSTGGK-TPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGSRS 600

Query: 601 VASRKRPGSAIKSSGQKLNVVGFRGRSNQS 627
           +A+R + GS  +  G+KL+VVGFRG+S+ +
Sbjct: 601 IAARGKTGSD-RRPGKKLSVVGFRGKSSSA 618

[Close]

BLAST of CsGy7G011550 vs. TAIR 10
Match: AT3G06980.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-50
Identity = 135/411 (32.85%), Postives = 220/411 (53.53%), Query Frame = 0


Query: 120 ESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 179
           ++F E+G +E++M A++E     P+ IQ +    V++GKS I+   +GSGKTLAYL+P++
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433

Query: 180 QLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHH-ARFRSTMVSGGGRLR 239
           Q LR +E        P  PR +VL PT EL+ QV    +SIS     FRS +V+GG R R
Sbjct: 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQR 493

Query: 240 PQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 299
            Q ++L   +D+++ TPGR    +  G +   +++  +LDE D +    FG D  +F   
Sbjct: 494 TQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDIL----FGDD--EFEAA 553

Query: 300 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 359
           L++  +S      Q + VTAT+   +   + E F     +    +H+   +     +  S
Sbjct: 554 LQNLINSSPVTA-QYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCS 613

Query: 360 GS-----------ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL-----GENQ 419
           G            +NK  ALLQ++E +    ++ ++FCN + + R V++        E Q
Sbjct: 614 GDDNAEKTPETAFQNKKTALLQIMEENPV--SKTIIFCNKIETCRKVENIFKRVDRKERQ 673

Query: 420 ISTVNYHGEVPAQKRVENLKKFKSD--DADCPTLVCTDLAARGLDLD-VDHVIMFDFPSN 479
           +  + +H  +  + R+ N+++F S   + +   LVCTD A+RG+D   VDHV++FDFP +
Sbjct: 674 LHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRD 733

Query: 480 SIDYLHRTGRTARMGAKGKVTS---LVGKKDNILATRIEEAIRKNESLESL 508
             +Y+ R GRTAR GA+GK  +   +VGK+   LA RI E   K   +  +
Sbjct: 734 PSEYVRRVGRTAR-GARGKGKAFIFVVGKQVG-LARRIIERNEKGHPVHDV 773

[Close]

BLAST of CsGy7G011550 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-46
Identity = 118/359 (32.87%), Postives = 187/359 (52.09%), Query Frame = 0


Query: 120 ESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 179
           +SF ++G  + V+  V++ G   P+ IQ  G P  ++G+ +I  + TGSGKTL+YLLP +
Sbjct: 99  KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158

Query: 180 QLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 239
             +         L     P  +VL PTREL+ Q+ + +      ++ ++T + GG    P
Sbjct: 159 VHVNAQP----MLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGP 218

Query: 240 QEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPL 299
           Q   L   +++V+ TPGR++  +E+ N     + YLVLDEAD M D GF P IRK +   
Sbjct: 219 QVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIV--- 278

Query: 300 KHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 359
                SH     QT+  +AT  K V++L  +       +   +   K   A    + +  
Sbjct: 279 -----SHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVIS 338

Query: 360 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 419
              K   L+++LE  +  G+R++VF +T      +   L  +    ++ HG+    +R  
Sbjct: 339 ESQKYNKLVKLLE-DIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 398

Query: 420 NLKKFKSDDADCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAKG 478
            L +F+S  +  P +  TD+AARGLD+ DV +VI +DFP +  DY+HR GRT R GAKG
Sbjct: 399 VLSEFRSGKS--PIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKG 442

[Close]

BLAST of CsGy7G011550 vs. TAIR 10
Match: AT3G18600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 2.3e-45
Identity = 137/429 (31.93%), Postives = 216/429 (50.35%), Query Frame = 0


Query: 70  KHSQLLERLRTRHLKESAPKT-KPTRNTLSQSVGSAEDEMKKSEKKKKKLDE-------- 129
           K+ Q     +T  ++E+A +T K +   + +  G  E+E +K E  +   DE        
Sbjct: 24  KNEQQKAEEKTHTVEENADETQKKSEKKVKKVRGKIEEEEEKVEAMEDGEDEKNIVIVGK 83

Query: 130 ------SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAY 189
                 +F+ L L+E+   A++EMG Q  ++IQ   I  +LEGK V+  + TGSGKTLA+
Sbjct: 84  GIMTNVTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAF 143

Query: 190 LLPLVQLLRRDEELFGRLMKPRRPRAV-VLCPTRELSEQVFRVSKSISHHARFRSTMVSG 249
           L+P V+L      LF     PR    V V+CPTREL+ Q   V++ +  H     +MV G
Sbjct: 144 LIPAVEL------LFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIG 203

Query: 250 GGRLRPQEDSLSNPIDMVVGTPGRVLQHIE-AGNMVYGDIKYLVLDEADTMFDHGFGPDI 309
           G   R +   +++  ++V+ TPGR+L H++     +Y  +K LV+DEAD + +  F  D+
Sbjct: 204 GNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDM 263

Query: 310 RKFIGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIAS-AR 369
            K +  L            QT L +AT T  V+ L        VH+      +K+ +   
Sbjct: 264 NKILKILPKTR--------QTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGL 323

Query: 370 HDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGE 429
                +  S+ +L  L+  L+ +L K  ++MVF +T  S +     +  + +   + HG 
Sbjct: 324 EQGYCVVPSKQRLILLISFLKKNLNK--KIMVFFSTCKSVQFHTEIMKISDVDVSDIHGG 383

Query: 430 VPAQKRVENLKKFKSDDADCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRT 479
           +   +R +    F    A    L+CTD+AARGLD+  VD +I +D P    +Y+HR GRT
Sbjct: 384 MDQNRRTKTFFDFMK--AKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRT 434

[Close]

BLAST of CsGy7G011550 vs. TAIR 10
Match: AT2G42520.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 2.9e-45
Identity = 122/391 (31.20%), Postives = 197/391 (50.38%), Query Frame = 0


Query: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           +F E+ L E +   +R      P+ +Q   IP +LEG+ ++  + TGSGKT A+  P++ 
Sbjct: 160 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIIS 219

Query: 181 LLRRDEELFGRLMKPR-----RPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGG 240
            + +D+     + +PR      P AV+L PTREL+ Q+   +K  S+    +  +  GG 
Sbjct: 220 GIMKDQ----HVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGT 279

Query: 241 RLRPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKF 300
            +  Q   L   +D++V TPGR+   +E   +    I++L LDEAD M D GF P IRK 
Sbjct: 280 PINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKI 339

Query: 301 IGPLKHRASSHDDQGF-QTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKK--IASARH 360
           +  +         +G  QT+L +AT  + +Q+L  +     + L    +     +   R 
Sbjct: 340 VEQM-----DMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRV 399

Query: 361 DFIKLSGSENKLEALLQVLEPSLAKGNR--VMVFCNTLNSSRAVDHFLGENQISTVNYHG 420
           +F+  S   + L  LL     +  +G +   +VF  T   + +++++L  N     + HG
Sbjct: 400 EFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHG 459

Query: 421 EVPAQKRVENLKKFKSDDADCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGR 480
           +   Q+R   LK FKS     P LV TD+AARGLD+  V HV+ FD P++  DY+HR GR
Sbjct: 460 DRTQQEREVALKAFKS--GRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 519

Query: 481 TARMGAKGKVTSLVGKKDNILATRIEEAIRK 501
           T R G  G  T+     +  LA  + E +++
Sbjct: 520 TGRAGKSGLATAFFNDGNTSLARPLAELMQE 539

The following BLAST results are available for this feature:

BLAST of CsGy7G011550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56X76	1.3e-215	66.67	DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 P...	[more]
Q5VRY0	2.2e-202	65.88	DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q0DVX2	9.8e-54	32.94	DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5B0J9	1.9e-49	32.99	ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38...	[more]
Q8GUG7	1.9e-49	32.85	DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana OX=3702 GN=RH50 P...	[more]

BLAST of CsGy7G011550 vs. NCBI nr


Match Name	Identity	Description
XP_004139692.1	100.00	DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >XP_011659101.1 DEAD-bo...	[more]
XP_008461901.1	96.06	PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo]	[more]
TYK14098.1	96.05	DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo var. makuwa]	[more]
XP_038898304.1	90.85	DEAD-box ATP-dependent RNA helicase 39 [Benincasa hispida]	[more]
XP_022143665.1	86.83	DEAD-box ATP-dependent RNA helicase 39 [Momordica charantia]	[more]

BLAST of CsGy7G011550 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A1S3CFM7	96.06	DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo OX=3656 GN=LOC103500395 P...	[more]
A0A5D3CSB8	96.05	DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1CPE5	86.83	DEAD-box ATP-dependent RNA helicase 39 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1IQ01	86.59	DEAD-box ATP-dependent RNA helicase 39 OS=Cucurbita maxima OX=3661 GN=LOC1114771...	[more]
A0A6J1F9C3	86.61	DEAD-box ATP-dependent RNA helicase 39 isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of CsGy7G011550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09730.1	9.3e-217	66.67	RH39	[more]
AT3G06980.1	1.4e-50	32.85	DEA(D/H)-box RNA helicase family protein	[more]
AT1G55150.1	2.0e-46	32.87	DEA(D/H)-box RNA helicase family protein	[more]
AT3G18600.1	2.3e-45	31.93	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G42520.1	2.9e-45	31.20	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 538..558
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 527..634
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 603..634
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..116
None	No IPR available	PANTHER	PTHR47960:SF19	DEAD-BOX ATP-DEPENDENT RNA HELICASE 39	coord: 32..550
None	No IPR available	PANTHER	PTHR47960	DEAD-BOX ATP-DEPENDENT RNA HELICASE 50	coord: 32..550
None	No IPR available	CDD	cd00268	DEADc	coord: 131..330 e-value: 1.70508E-73 score: 232.717
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 351..483 e-value: 7.00793E-41 score: 143.032
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 392..474 e-value: 1.2E-24 score: 97.9
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 363..474 e-value: 4.1E-24 score: 85.1
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 363..513 score: 16.235239
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 139..358 e-value: 1.1E-45 score: 167.8
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 151..338 score: 27.5165
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 83..339 e-value: 4.9E-67 score: 227.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 349..511 e-value: 2.1E-40 score: 139.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 151..485
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 145..327 e-value: 1.6E-40 score: 138.7
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 120..148 score: 11.320569

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G011550.2	CsGy7G011550.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901259	chloroplast rRNA processing
biological_process	GO:1902775	mitochondrial large ribosomal subunit assembly
biological_process	GO:0110102	ribulose bisphosphate carboxylase complex assembly
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding