CsGy7G011480 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G011480
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	AAA_11 domain-containing protein
Location	Gy14Chr7: 14508092 .. 14508483 (+)
RNA-Seq Expression	CsGy7G011480
Synteny	CsGy7G011480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATAATTTGATACCAACGTTTGAAGCTTTGAGTATCAGTAAGAATGATCATAAGGTCAACAAGGAGCAAGCTCCGCCAAAAACTACAAACCCCAAAGGCCTTATTGATGTTTTGGTTTCTTGGTCTCTTGAAGACATTTTCAATCAACATCTTTTCAAAACTAAGGTTCTTCTTCTTCTACTACTTCTTTTTATTTTTGACAATGTGTGAAGGCCAAACCAAAGAACTTCCAAACCTAAAACTCGATAATATAATTCTAATCCTTGTTCATTTCGACTTATTCTTAATGCATGCATGTATACAACAAACATCTCTTTATGTTTTTTTCTTTTACAATTATTTCAACTATTTATGTTATATCCTCATGTTTTTAGCTAAGGGTTTGA

mRNA sequence

ATGGAGAATAATTTGATACCAACGTTTGAAGCTTTGAGTATCAGTAAGAATGATCATAAGGTCAACAAGGAGCAAGCTCCGCCAAAAACTACAAACCCCAAAGGCCTTATTGATGTTTTGGTTTCTTGGTCTCTTGAAGACATTTTCAATCAACATCTTTTCAAAACTAAGCTAAGGGTTTGA

Coding sequence (CDS)

ATGGAGAATAATTTGATACCAACGTTTGAAGCTTTGAGTATCAGTAAGAATGATCATAAGGTCAACAAGGAGCAAGCTCCGCCAAAAACTACAAACCCCAAAGGCCTTATTGATGTTTTGGTTTCTTGGTCTCTTGAAGACATTTTCAATCAACATCTTTTCAAAACTAAGCTAAGGGTTTGA

Protein sequence

MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVLVSWSLEDIFNQHLFKTKLRV*

Homology

[Close]

BLAST of CsGy7G011480 vs. NCBI nr
Match: XP_031745084.1 (uncharacterized protein LOC101214715 [Cucumis sativus])

HSP 1 Score: 115 bits (288), Expect = 4.68e-28
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 1  MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVLVSWSLEDIFNQHLFKTKL 58
          MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVLVSWSLEDIFNQHLF  K+
Sbjct: 1  MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVLVSWSLEDIFNQHLFIEKI 58

[Close]

BLAST of CsGy7G011480 vs. NCBI nr
Match: KGN44700.2 (hypothetical protein Csa_016709 [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 1.65e-17
Identity = 42/51 (82.35%), Postives = 44/51 (86.27%), Query Frame = 0


Query: 1  MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVLVSWSLEDIFNQ 51
          MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVL+   +   FN 
Sbjct: 1  MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVLIE-KIPQCFNS 50

[Close]

BLAST of CsGy7G011480 vs. NCBI nr
Match: XP_011659750.2 (uncharacterized protein LOC101220392 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 2.99e-06
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 2  ENNLIPTFEALSISKNDHKVNKEQA------PPKTTNPKGLID---VLVSWSLEDIFNQH 59
          +N  I  F+AL+IS+    V  E+        P +T+P  +++   +LVSWSL+DIFNQH
Sbjct: 14 DNTFISKFKALNISQKKLAVRGEEDYSFSNNNPSSTSPNNILNFIHILVSWSLQDIFNQH 73

[Close]

BLAST of CsGy7G011480 vs. ExPASy TrEMBL
Match: A0A0A0K415 (AAA_11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G291110 PE=4 SV=1)

HSP 1 Score: 121 bits (303), Expect = 1.84e-30
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 1  MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVLVSWSLEDIFNQHLFKTKLR 59
          MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVLVSWSLEDIFNQHLFKTK+ 
Sbjct: 1  MENNLIPTFEALSISKNDHKVNKEQAPPKTTNPKGLIDVLVSWSLEDIFNQHLFKTKIE 59

[Close]

BLAST of CsGy7G011480 vs. ExPASy TrEMBL
Match: A0A6J1E220 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025272 OS=Momordica charantia OX=3673 GN=LOC111025272 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.59e-04
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 5  LIPTFEALSISKNDHKVNKEQAPPKTTNP-------KGLIDVLVSWSLEDIFNQHLFKTK 59
          L+   EAL+++ N      +Q      N        K LIDVL+SWSLEDIFN+HLFK +
Sbjct: 13 LVAKLEALNLNINGGTETTKQQQRFRANQAAHQNSFKPLIDVLLSWSLEDIFNKHLFKLQ 72

The following BLAST results are available for this feature:

BLAST of CsGy7G011480 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G011480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745084.1	4.68e-28	94.83	uncharacterized protein LOC101214715 [Cucumis sativus]	[more]
KGN44700.2	1.65e-17	82.35	hypothetical protein Csa_016709 [Cucumis sativus]	[more]
XP_011659750.2	2.99e-06	41.79	uncharacterized protein LOC101220392 [Cucumis sativus]	[more]

BLAST of CsGy7G011480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K415	1.84e-30	96.61	AAA_11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G291110 PE=4...	[more]
A0A6J1E220	5.59e-04	41.94	LOW QUALITY PROTEIN: uncharacterized protein LOC111025272 OS=Momordica charantia...	[more]

BLAST of CsGy7G011480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G011480.1	CsGy7G011480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0030050	vesicle transport along actin filament
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016459	myosin complex
cellular_component	GO:0031982	vesicle
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000146	microfilament motor activity