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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGCCAGTGTGGGCTTATTCAAATTCCCACAAGGAAGCACAAGCCCAAGCCCAAGCCCAAGCTCAAAACGCAGCGTCTCATCAACCGGAATTCGGAAATGATTCAGGTGACTCTAGCGATCACAAAGGTTCAGTCGTTTCCACAGAGAGAAGCATATTTGGGAATCCCTCCCTGTGAGTGGCGGTGA mRNA sequence ATGGGCCAGTGTGGGCTTATTCAAATTCCCACAAGGAAGCACAAGCCCAAGCCCAAGCCCAAGCTCAAAACGCAGCGTCTCATCAACCGGAATTCGGAAATGATTCAGGTGACTCTAGCGATCACAAAGGTTCAGTCGTTTCCACAGAGAGAAGCATATTTGGGAATCCCTCCCTGTGAGTGGCGGTGA Coding sequence (CDS) ATGGGCCAGTGTGGGCTTATTCAAATTCCCACAAGGAAGCACAAGCCCAAGCCCAAGCCCAAGCTCAAAACGCAGCGTCTCATCAACCGGAATTCGGAAATGATTCAGGTGACTCTAGCGATCACAAAGGTTCAGTCGTTTCCACAGAGAGAAGCATATTTGGGAATCCCTCCCTGTGAGTGGCGGTGA Protein sequence MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCEWR*
Homology
BLAST of CsGy7G010875 vs. NCBI nr
Match: KGN44353.1 (hypothetical protein Csa_016359 [Cucumis sativus]) HSP 1 Score: 131 bits (329), Expect = 2.07e-38 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
Query: 1 MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE 60
MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE
Sbjct: 1 MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE 60
Query: 61 WR 62
WR
Sbjct: 61 WR 62
BLAST of CsGy7G010875 vs. ExPASy TrEMBL
Match: A0A0A0K4C3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268500 PE=4 SV=1) HSP 1 Score: 131 bits (329), Expect = 1.00e-38 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
Query: 1 MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE 60
MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE
Sbjct: 1 MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE 60
Query: 61 WR 62
WR
Sbjct: 61 WR 62
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN44353.1 | 2.07e-38 | 100.00 | hypothetical protein Csa_016359 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K4C3 | 1.00e-38 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268500 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..24 |
Relationships
The following mRNA feature(s) are a part of this gene:
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