CsGy7G008073 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G008073
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	U11/U12 small nuclear ribonucleoprotein 31 kDa protein
Location	Gy14Chr7: 8157765 .. 8158773 (-)
RNA-Seq Expression	CsGy7G008073
Synteny	CsGy7G008073

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCCAAGGGAAAGAAAACCAATAGCCCTACTAGCGACAGCGACGAGGACGAAACCTTCTATTACCGGTATCCCTCCGCCCCCTCTTCTGACCCGTCGCTGCCGTCGTCTTCACAGTCGCACTTCTCATCGCAATCGCACTTCTCATCGCAATCGCACTCACACTCACACTCTTCCACTAAGTCTGGCGGTGGTTCTGGAGGTTTGGTTCCTTCGAAGTCTACTCTCTATGTTTCCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTTCAACTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATCGACAGACTCGCAAGTCTCGCGGCGTTGCCTTCGTCCAGTTTATTTCTCAGGACGACGCGGTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGATAATGGTCGTGCGGCTGAGTTTATAAGGAAGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCGCAATTGATGGGCATTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGGGTAAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGGGTTTGAGGATGACAATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAAGAGAAGAAAGCAAGTTATTTCAGTGACGAGAGCGACGAAGATGATTAACTGAGCCTGTCTCTTTGGGAAGAGTTTGTAAAAGGTGCGTGGTTTTTACTATTGTATTGTTTTTATCTGCCGTTCCATTATATTTTGAACCTCTATTTCTGGTTGATTTTGGTGCATGATTTTTGGGTGGCATTGTTAGATGAGATAAAGCTTACAGAGTTTAGATTTTGGGCTGCCGGGTGCGATAAGTAATAACGAGTTACAG

mRNA sequence

ATGGCGCCCAAGGGAAAGAAAACCAATAGCCCTACTAGCGACAGCGACGAGGACGAAACCTTCTATTACCGGTATCCCTCCGCCCCCTCTTCTGACCCGTCGCTGCCGTCGTCTTCACAGTCGCACTTCTCATCGCAATCGCACTTCTCATCGCAATCGCACTCACACTCACACTCTTCCACTAAGTCTGGCGGTGGTTCTGGAGGTTTGGTTCCTTCGAAGTCTACTCTCTATGTTTCCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTTCAACTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATCGACAGACTCGCAAGTCTCGCGGCGTTGCCTTCGTCCAGTTTATTTCTCAGGACGACGCGGTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGATAATGGTCGTGCGGCTGAGTTTATAAGGAAGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCGCAATTGATGGGCATTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGGGTAAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGGGTTTGAGGATGACAATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAAGAGAAGAAAGCAAGTTATTTCAGTGACGAGAGCGACGAAGATGATTAACTGAGCCTGTCTCTTTGGGAAGAGTTTGTAAAAGATGAGATAAAGCTTACAGAGTTTAGATTTTGGGCTGCCGGGTGCGATAAGTAATAACGAGTTACAG

Coding sequence (CDS)

ATGGCGCCCAAGGGAAAGAAAACCAATAGCCCTACTAGCGACAGCGACGAGGACGAAACCTTCTATTACCGGTATCCCTCCGCCCCCTCTTCTGACCCGTCGCTGCCGTCGTCTTCACAGTCGCACTTCTCATCGCAATCGCACTTCTCATCGCAATCGCACTCACACTCACACTCTTCCACTAAGTCTGGCGGTGGTTCTGGAGGTTTGGTTCCTTCGAAGTCTACTCTCTATGTTTCCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTTCAACTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATCGACAGACTCGCAAGTCTCGCGGCGTTGCCTTCGTCCAGTTTATTTCTCAGGACGACGCGGTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGATAATGGTCGTGCGGCTGAGTTTATAAGGAAGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCGCAATTGATGGGCATTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGGGTAAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGGGTTTGAGGATGACAATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAAGAGAAGAAAGCAAGTTATTTCAGTGACGAGAGCGACGAAGATGATTAA

Protein sequence

MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD*

Homology

[Close]

BLAST of CsGy7G008073 vs. ExPASy Swiss-Prot
Match: Q9CAE4 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP31 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.9e-70
Identity = 157/275 (57.09%), Postives = 184/275 (66.91%), Query Frame = 0


Query: 6   KKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGG 65
           KK     SD +ED+TFYYRY S  +  PS P                  S S  S+  GG
Sbjct: 2   KKRKIHHSDDEEDDTFYYRYSSVAAPPPSNP--------------KHQPSSSAKSSAPGG 61

Query: 66  GSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFIS 125
           GSGGL PSKSTLYVSN D+SLTNSD+HTLF  FGK+ARVTVLKDR TR+SRGVAFV ++S
Sbjct: 62  GSGGLAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVS 121

Query: 126 QDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYE 185
           ++DA KAA+ M  KILNGR L  +IA DNGRA+EFI+KRVYKDKSRCYECG  +GHLSYE
Sbjct: 122 REDAAKAARSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGD-EGHLSYE 181

Query: 186 CPKNQLGPRERPEPKRV---RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDA 245
           CPKNQLGPRERP P +    R+   G   E  W +         E FE++NWASVVD +A
Sbjct: 182 CPKNQLGPRERPPPPKKRGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEA 241

Query: 246 DQRLLTGGENIVE----KKKEKKASYFSDESDEDD 268
            +RL        E    K+KEKK SYFSDESD++D
Sbjct: 242 GERLRKREAEEEEERRMKRKEKKVSYFSDESDDED 261

[Close]

BLAST of CsGy7G008073 vs. ExPASy Swiss-Prot
Match: Q499V6 (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Zcrb1 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.1e-42
Identity = 100/217 (46.08%), Postives = 137/217 (63.13%), Query Frame = 0


Query: 67  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQ 126
           SGGL PSKST+YVSN  +SLTN+DL+ +F  +GK+ +VT++KD+ TRKS+GVAF+ F+ +
Sbjct: 2   SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61

Query: 127 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYEC 186
           D A+   + ++ K L GRV+KA+IA DNGRAAEFIR+R Y DKS+CYECG   GHLSY C
Sbjct: 62  DSALNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGE-SGHLSYAC 121

Query: 187 PKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVD 246
           PKN LG RE P+ K + ++  V    EE    +V E   +D              A + +
Sbjct: 122 PKNMLGEREPPKKKEKKKKKKVPEPEEEIEEVEVSEEEGEDPALDSLSQAIAFQQAKIEE 181

Query: 247 GDADQRLLTGGENIVEKKKE---KKASYFSDESDEDD 268
                R  TGG +  +  +    KK++YFSDE +  D
Sbjct: 182 EQNKWRPSTGGPSTSDDSRRPRIKKSAYFSDEEELSD 217

[Close]

BLAST of CsGy7G008073 vs. ExPASy Swiss-Prot
Match: Q8TBF4 (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Homo sapiens OX=9606 GN=ZCRB1 PE=1 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 5.3e-41
Identity = 99/220 (45.00%), Postives = 135/220 (61.36%), Query Frame = 0


Query: 67  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQ 126
           SGGL PSKST+YVSN  +SLTN+DL+ +F  +GK+ +VT++KD+ TRKS+GVAF+ F+ +
Sbjct: 2   SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61

Query: 127 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYEC 186
           D A    + ++ K L GRV+KA+IA DNGRAAEFIR+R Y DKS+CYECG   GHLSY C
Sbjct: 62  DSAQNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGE-SGHLSYAC 121

Query: 187 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGEN 246
           PKN LG RE P+ K  ++       EE+   +  E  ED+     +D    Q +      
Sbjct: 122 PKNMLGEREPPKKKEKKKKKKAPEPEEE--IEEVEESEDEGEDPALD-SLSQAIAFQQAK 181

Query: 247 IVEKKKE-------------------KKASYFSDESDEDD 268
           I E++K+                   KK++YFSDE +  D
Sbjct: 182 IEEEQKKWKPSSGVPSTSDDSRRPRIKKSTYFSDEEELSD 217

[Close]

BLAST of CsGy7G008073 vs. ExPASy Swiss-Prot
Match: Q9CZ96 (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Mus musculus OX=10090 GN=Zcrb1 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.3e-41
Identity = 98/217 (45.16%), Postives = 137/217 (63.13%), Query Frame = 0


Query: 67  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQ 126
           SGGL PSKST+YVSN  +SLTN+DL+ +F  +GK+ +VT++KD+ TRKS+GVAF+ F+ +
Sbjct: 2   SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61

Query: 127 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYEC 186
           D A+   + ++ K L GRV+KA+IA DNGRAAEFIR+R Y DKS+CYECG   GHLSY C
Sbjct: 62  DSALNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGE-SGHLSYAC 121

Query: 187 PKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVD 246
           PKN LG RE P+ K + ++  +    EE    +V E   +D              A + +
Sbjct: 122 PKNMLGEREPPKKKEKKKKRKLPEPEEEIEEVEVSEEEGEDPALDSLSQAIAFQQAKIEE 181

Query: 247 GDADQRLLTGGENIVEKKKE---KKASYFSDESDEDD 268
             +  R   GG +  +  +    KK++YFSDE +  D
Sbjct: 182 EQSKWRPNPGGPSTSDDSRRPRIKKSAYFSDEEELSD 217

[Close]

BLAST of CsGy7G008073 vs. ExPASy Swiss-Prot
Match: Q5SP50 (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Danio rerio OX=7955 GN=zcrb1 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.5e-40
Identity = 100/218 (45.87%), Postives = 131/218 (60.09%), Query Frame = 0


Query: 67  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQ 126
           SGGL PSKST+YVSN  +SLTNSD+H L   +GK+ +VT++KD+ TR S+GVAFV F+ +
Sbjct: 2   SGGLAPSKSTVYVSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDR 61

Query: 127 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYEC 186
           + A   ++ ++ K L GR++KA+IA DNGRAAEFIRKR Y DKS+CYECG  +GHLSY C
Sbjct: 62  ESAYNCSRSLNNKQLFGRMVKASIAIDNGRAAEFIRKRNYTDKSKCYECGE-EGHLSYAC 121

Query: 187 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGE- 246
           PKN LG RE P  K  ++     + EE    D  E  ED    S+    A Q+     E 
Sbjct: 122 PKNLLGEREPPPKKEKKKKKKVQQPEEVEPEDSEEEGEDPALDSLSQAIAFQQARIEEEE 181

Query: 247 ----------------NIVEKKKEKKASYFSDESDEDD 268
                               K + KK++YFSDE +  D
Sbjct: 182 KRRKQAAEDASQASTSEDTHKPRIKKSAYFSDEEELSD 218

[Close]

BLAST of CsGy7G008073 vs. NCBI nr
Match: XP_031745992.1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >KAE8637587.1 hypothetical protein CSA_004586 [Cucumis sativus])

HSP 1 Score: 522 bits (1345), Expect = 1.09e-186
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS
Sbjct: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
           TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF
Sbjct: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG
Sbjct: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL
Sbjct: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LTGGENIVEKKKEKKASYFSDESDEDD
Sbjct: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267

[Close]

BLAST of CsGy7G008073 vs. NCBI nr
Match: XP_031745314.1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >KAE8637394.1 hypothetical protein CSA_004754 [Cucumis sativus])

HSP 1 Score: 516 bits (1329), Expect = 2.99e-184
Identity = 265/267 (99.25%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           MAPK KKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS
Sbjct: 1   MAPKEKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
           TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLF NFGKIARVTVLKDRQTRKSRGVAF
Sbjct: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG
Sbjct: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL
Sbjct: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LTGGENIVEKKKEKKASYFSDESDEDD
Sbjct: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267

[Close]

BLAST of CsGy7G008073 vs. NCBI nr
Match: XP_031739837.1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >XP_031745445.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >XP_031745456.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >XP_031745622.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >XP_031745721.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >KAE8637133.1 hypothetical protein CSA_021509 [Cucumis sativus] >KAE8637376.1 hypothetical protein CSA_004469 [Cucumis sativus] >KAE8637383.1 hypothetical protein CSA_004476 [Cucumis sativus] >KAE8637476.1 hypothetical protein CSA_018827 [Cucumis sativus] >KAE8637589.1 hypothetical protein CSA_021598 [Cucumis sativus])

HSP 1 Score: 503 bits (1296), Expect = 2.58e-179
Identity = 260/267 (97.38%), Postives = 260/267 (97.38%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH      SHSHSS
Sbjct: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH------SHSHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
           TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLF NFGKIARVTVLKDRQTRKSRGVAF
Sbjct: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG
Sbjct: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL
Sbjct: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LTGGENIVEKKKEKKASYFSDESDEDD
Sbjct: 241 LTGGENIVEKKKEKKASYFSDESDEDD 261

[Close]

BLAST of CsGy7G008073 vs. NCBI nr
Match: XP_008456528.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Cucumis melo] >KAA0036504.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Cucumis melo var. makuwa] >TYJ99977.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 473 bits (1216), Expect = 3.74e-167
Identity = 246/267 (92.13%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           MA KGKKTN+PTSDSDEDETFYYRYPSA SS P LPSSSQSHFSSQSH        SHSS
Sbjct: 1   MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSH--------SHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
           TKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTVLKDRQTRKSRGVAF
Sbjct: 61  TKSGGGSGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGA+DG
Sbjct: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECPKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQRL
Sbjct: 181 HLSYECPKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LTGGENIVEKKK KKASYFSDES EDD
Sbjct: 241 LTGGENIVEKKKAKKASYFSDESGEDD 259

[Close]

BLAST of CsGy7G008073 vs. NCBI nr
Match: XP_038883985.1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Benincasa hispida])

HSP 1 Score: 460 bits (1184), Expect = 2.81e-162
Identity = 238/267 (89.14%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           MA KGK+TN+P SDS++DETFYYRYPSA SS P  PS+SQSHFSSQSH        SHSS
Sbjct: 1   MARKGKRTNNPNSDSEDDETFYYRYPSAASSAPPPPSASQSHFSSQSH--------SHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
           TK  GGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTVLKDRQTRKSRGVAF
Sbjct: 61  TKFSGGSGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           VQFISQDDAVKAAKQM+GKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGA+DG
Sbjct: 121 VQFISQDDAVKAAKQMNGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECPKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL
Sbjct: 181 HLSYECPKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LTGGEN+VEKKK KKASYFSDESDEDD
Sbjct: 241 LTGGENVVEKKKAKKASYFSDESDEDD 259

[Close]

BLAST of CsGy7G008073 vs. ExPASy TrEMBL
Match: A0A5A7SYZ1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00210 PE=4 SV=1)

HSP 1 Score: 473 bits (1216), Expect = 1.81e-167
Identity = 246/267 (92.13%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           MA KGKKTN+PTSDSDEDETFYYRYPSA SS P LPSSSQSHFSSQSH        SHSS
Sbjct: 1   MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSH--------SHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
           TKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTVLKDRQTRKSRGVAF
Sbjct: 61  TKSGGGSGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGA+DG
Sbjct: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECPKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQRL
Sbjct: 181 HLSYECPKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LTGGENIVEKKK KKASYFSDES EDD
Sbjct: 241 LTGGENIVEKKKAKKASYFSDESGEDD 259

[Close]

BLAST of CsGy7G008073 vs. ExPASy TrEMBL
Match: A0A1S3C324 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucumis melo OX=3656 GN=LOC103496454 PE=4 SV=1)

HSP 1 Score: 473 bits (1216), Expect = 1.81e-167
Identity = 246/267 (92.13%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           MA KGKKTN+PTSDSDEDETFYYRYPSA SS P LPSSSQSHFSSQSH        SHSS
Sbjct: 1   MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSH--------SHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
           TKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTVLKDRQTRKSRGVAF
Sbjct: 61  TKSGGGSGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGA+DG
Sbjct: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECPKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQRL
Sbjct: 181 HLSYECPKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LTGGENIVEKKK KKASYFSDES EDD
Sbjct: 241 LTGGENIVEKKKAKKASYFSDESGEDD 259

[Close]

BLAST of CsGy7G008073 vs. ExPASy TrEMBL
Match: A0A6J1JX53 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111489639 PE=4 SV=1)

HSP 1 Score: 443 bits (1139), Expect = 9.78e-156
Identity = 228/267 (85.39%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           M+ KGK+  +P SDSD+DETFYYRYPSA SS P  PSSSQSHFSSQSH        SHSS
Sbjct: 1   MSRKGKRAKNPNSDSDDDETFYYRYPSATSSAPPPPSSSQSHFSSQSH--------SHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
           TKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTVLKDRQTRKSRG AF
Sbjct: 61  TKSGGGSGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGAAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           VQFISQDDAVK  KQMHGKILNGR LK AIA DNGRAAEFIRKRVYKDKSRCYECGA+DG
Sbjct: 121 VQFISQDDAVKTVKQMHGKILNGRALKVAIANDNGRAAEFIRKRVYKDKSRCYECGAVDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECPKNQLGPRERPEPKRVR+GGVGARHEEDWGSD GEGFEDD WASVVDGDADQRL
Sbjct: 181 HLSYECPKNQLGPRERPEPKRVRKGGVGARHEEDWGSDDGEGFEDDKWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LT  EN+VEKKK KKASYFSDES ED+
Sbjct: 241 LTSSENVVEKKKAKKASYFSDESGEDE 259

[Close]

BLAST of CsGy7G008073 vs. ExPASy TrEMBL
Match: A0A6J1FIA0 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111445663 PE=4 SV=1)

HSP 1 Score: 442 bits (1137), Expect = 1.97e-155
Identity = 228/267 (85.39%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           M+ K K+  +P SDSD+DETFYYRYPSA SS P  PSSSQSHFSSQSH        SHSS
Sbjct: 1   MSRKEKRAKNPNSDSDDDETFYYRYPSATSSAPPPPSSSQSHFSSQSH--------SHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
           TKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTVLKDRQTRKSRG AF
Sbjct: 61  TKSGGGSGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGAAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           VQFISQDDAVK  KQMHGKILNGR LK AIA DNGRAAEFIRKRVYKDKSRCYECGA+DG
Sbjct: 121 VQFISQDDAVKTVKQMHGKILNGRALKVAIANDNGRAAEFIRKRVYKDKSRCYECGAVDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECPKNQLGPRERPEPKRVR+GGVGARHEEDWGSD GEGFEDDNWASVVDGDADQRL
Sbjct: 181 HLSYECPKNQLGPRERPEPKRVRKGGVGARHEEDWGSDDGEGFEDDNWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LT  EN+VEKKK KKASYFSDES ED+
Sbjct: 241 LTSSENVVEKKKAKKASYFSDESGEDE 259

[Close]

BLAST of CsGy7G008073 vs. ExPASy TrEMBL
Match: A0A6J1BY38 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Momordica charantia OX=3673 GN=LOC111006640 PE=4 SV=1)

HSP 1 Score: 431 bits (1108), Expect = 4.31e-151
Identity = 226/267 (84.64%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 1   MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
           MA KGK+TN P SDSD+DETFYYRYPSA SS P  PSSSQS           S +HSHSS
Sbjct: 1   MARKGKRTN-PNSDSDDDETFYYRYPSAASSAPP-PSSSQS-----------SQAHSHSS 60

Query: 61  TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
            KSGGGSGGLVPSKST+YVSN DYSLTNSDLHTLF  FGKIARVTVLKDRQTR+SRGVAF
Sbjct: 61  IKSGGGSGGLVPSKSTVYVSNVDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRRSRGVAF 120

Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
           +QFISQDDAVKA K+M+GKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGA+DG
Sbjct: 121 IQFISQDDAVKACKEMNGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDG 180

Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
           HLSYECP+NQLGPRERPEPKR RRGGVGARHEEDWGSD GEGFEDDNWASVVDGDADQRL
Sbjct: 181 HLSYECPRNQLGPRERPEPKRGRRGGVGARHEEDWGSDGGEGFEDDNWASVVDGDADQRL 240

Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
           LTGGEN+ E+KK KKASYFSDESDED+
Sbjct: 241 LTGGENVAERKKGKKASYFSDESDEDE 254

[Close]

BLAST of CsGy7G008073 vs. TAIR 10
Match: AT3G10400.1 (RNA recognition motif and CCHC-type zinc finger domains containing protein )

HSP 1 Score: 267.3 bits (682), Expect = 1.3e-71
Identity = 157/275 (57.09%), Postives = 184/275 (66.91%), Query Frame = 0


Query: 6   KKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGG 65
           KK     SD +ED+TFYYRY S  +  PS P                  S S  S+  GG
Sbjct: 2   KKRKIHHSDDEEDDTFYYRYSSVAAPPPSNP--------------KHQPSSSAKSSAPGG 61

Query: 66  GSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFIS 125
           GSGGL PSKSTLYVSN D+SLTNSD+HTLF  FGK+ARVTVLKDR TR+SRGVAFV ++S
Sbjct: 62  GSGGLAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVS 121

Query: 126 QDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYE 185
           ++DA KAA+ M  KILNGR L  +IA DNGRA+EFI+KRVYKDKSRCYECG  +GHLSYE
Sbjct: 122 REDAAKAARSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGD-EGHLSYE 181

Query: 186 CPKNQLGPRERPEPKRV---RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDA 245
           CPKNQLGPRERP P +    R+   G   E  W +         E FE++NWASVVD +A
Sbjct: 182 CPKNQLGPRERPPPPKKRGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEA 241

Query: 246 DQRLLTGGENIVE----KKKEKKASYFSDESDEDD 268
            +RL        E    K+KEKK SYFSDESD++D
Sbjct: 242 GERLRKREAEEEEERRMKRKEKKVSYFSDESDDED 261

[Close]

BLAST of CsGy7G008073 vs. TAIR 10
Match: AT3G23830.1 (glycine-rich RNA-binding protein 4 )

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-11
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 68  GGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQD 127
           G L    S L+V    +   +S L   F +FG++   TV+ DR+T +SRG  FV F  +D
Sbjct: 28  GSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCED 87

Query: 128 DAVKAAKQMHGKILNGRVLKAAIATDNGRA 158
            A  A K+M GK LNGR ++  +AT+   A
Sbjct: 88  SANNAIKEMDGKELNGRQIRVNLATERSSA 117

[Close]

BLAST of CsGy7G008073 vs. TAIR 10
Match: AT3G23830.2 (glycine-rich RNA-binding protein 4 )

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-11
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 68  GGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQD 127
           G L    S L+V    +   +S L   F +FG++   TV+ DR+T +SRG  FV F  +D
Sbjct: 28  GSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCED 87

Query: 128 DAVKAAKQMHGKILNGRVLKAAIATDNGRA 158
            A  A K+M GK LNGR ++  +AT+   A
Sbjct: 88  SANNAIKEMDGKELNGRQIRVNLATERSSA 117

[Close]

BLAST of CsGy7G008073 vs. TAIR 10
Match: AT3G46020.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09
Identity = 32/94 (34.04%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 77  LYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQM 136
           L+VS      T+  L  LF  FG+I    +++D +T++ +G  F+ F S+DDA KA K +
Sbjct: 9   LFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKSL 68

Query: 137 HGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKS 171
            GKI++GR++   +A    + AE +R  +  +K+
Sbjct: 69  DGKIVDGRLIFVEVA----KNAEEVRAGINSNKA 98

[Close]

BLAST of CsGy7G008073 vs. TAIR 10
Match: AT4G20030.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-09
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 72  PSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVK 131
           P  S + V N  +S +   L   F  FG+IA V ++KD   ++S+G AF+QF SQDDA  
Sbjct: 37  PLASKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFL 96

Query: 132 AAKQMHGKILNGRVLKAAIATDNGR 157
           A + M  ++ NGR++   IA    R
Sbjct: 97  AIETMDRRMYNGRMIYIDIAKPGKR 121

The following BLAST results are available for this feature:

BLAST of CsGy7G008073 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAE4	1.9e-70	57.09	U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Arabidopsis thaliana O...	[more]
Q499V6	8.1e-42	46.08	Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Rattus norve...	[more]
Q8TBF4	5.3e-41	45.00	Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Homo sapiens...	[more]
Q9CZ96	5.3e-41	45.16	Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Mus musculus...	[more]
Q5SP50	1.5e-40	45.87	Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Danio rerio ...	[more]

BLAST of CsGy7G008073 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745992.1	1.09e-186	100.00	U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >K...	[more]
XP_031745314.1	2.99e-184	99.25	U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >K...	[more]
XP_031739837.1	2.58e-179	97.38	U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >X...	[more]
XP_008456528.1	3.74e-167	92.13	PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Cucumis melo]...	[more]
XP_038883985.1	2.81e-162	89.14	U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Benincasa hispida]	[more]

BLAST of CsGy7G008073 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYZ1	1.81e-167	92.13	U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucumis melo var. maku...	[more]
A0A1S3C324	1.81e-167	92.13	U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucumis melo OX=3656 G...	[more]
A0A6J1JX53	9.78e-156	85.39	U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucurbita maxima OX=36...	[more]
A0A6J1FIA0	1.97e-155	85.39	U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucurbita moschata OX=...	[more]
A0A6J1BY38	4.31e-151	84.64	U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Momordica charantia OX...	[more]

BLAST of CsGy7G008073 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10400.1	1.3e-71	57.09	RNA recognition motif and CCHC-type zinc finger domains containing protein	[more]
AT3G23830.1	2.0e-11	38.89	glycine-rich RNA-binding protein 4	[more]
AT3G23830.2	2.0e-11	38.89	glycine-rich RNA-binding protein 4	[more]
AT3G46020.1	2.4e-09	34.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G20030.1	3.2e-09	38.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 76..149 e-value: 1.6E-23 score: 94.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 77..147 e-value: 3.0E-20 score: 71.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 75..153 score: 18.563835
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 76..149 e-value: 0.0015 score: 27.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 27..150 e-value: 7.7E-27 score: 96.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
IPR044598	Zinc finger CCHC-type and RNA-binding motif-containing protein 1	PANTHER	PTHR46259	ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1	coord: 13..267
IPR034219	ZCRB1, RNA recognition motif	CDD	cd12393	RRM_ZCRB1	coord: 74..151 e-value: 2.77688E-38 score: 127.432
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 54..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G008073.1	CsGy7G008073.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0051302	regulation of cell division
cellular_component	GO:0005689	U12-type spliceosomal complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding