CsGy7G007880 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G007880
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	AvrRpt-cleavage domain-containing protein
Location	Gy14Chr7: 6056988 .. 6058657 (+)
RNA-Seq Expression	CsGy7G007880
Synteny	CsGy7G007880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTATGCTTTCTCTTTCATTTCTGCCTCTTCAACATATTATTACAATTTTTATTTTTTCTTCTTCGCTTTCTTGCTTTGATGTGTTTTTTCGATCGGTTTCATTATTACTTCCTTCTCAATTTCCCTTTTCTTGATTCCTTCCCCCACTTTGATTTCCCTATTGATTCTTCAATTCTTTTGTTTCCCACTTTCATTTCTTTATTCCTCTTCCTGGGATTCAAGTTTATCGATTGATAGATTCTATGCTTGTTCTATTGGACCCCCATAAATCTGGATTTTCTACCAGATTTATTTAGTTGTTGGAGCTCGTTTTTCAATCAATAAATCTCTCACCTGCATTTAAATACGGATTTAACTAGTGTTGGATTGGAGGAAAAAACCTCTTGATTGTTTTATTTTGTTTGATTGATTAGTATCGGTTTTGGAGGTATTTACAAAATCTGTTGCTATAAAGCACGTTGTGTGGTAATAGATGATGGTTTTTAGATGGTAGATTCTTTGTCCGATTAGTAAGGTAACGCATAAGATTCACAGAGGGTACATCTTGTTTATTTATTACTTTTTTTTCCCCTCTTCTTGTAGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTGTAAGATACATTCATAATCTTTTTCCTACTTGGGCGTTGGATGGTTGTTGTAGCTATATTGCATTCTATCTCTGTTGATAATAATTAATAAAGTAGTTGGCATCTAAACAATGCTTCTTCTATACCTCTGGACAATTGTTTGGTCTGTTACTGTCAATGAATTTCTGAGAGTGTTGATTCTCAGTTCTGACAGTATATTTATTGTATTCCAACCAATAGTTGCAAGCTTTTAGATGTTAAACACATGAAAAAAGGAACAAACAACCTTCAAAATCTATAATTTTAAGAAAAGAAAAGAAATATCACGGTAACGAGATATAGTCAGTATAAAAGGGTTTAATAGTCAGGGAAGTTGCCATCTTGCCCTTATCTGTTCTAAAGAATGCTACTTGTGTTCCTTTGGGCAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATGTGAGTGTGTATAGTAAGTATAACTCTGTTGAGCTTTGTTCAAAATCTTGGAAAGTATGAAACTGAAACATGTTGATAAAGTATCTAGAATTTAGTTAGAAGGAGAGACGATATCACATCATTTAATGTATTAACATCAGAATGTCTTTCAGTTTATATGCCTTGTTAGGAACTTTAAGTTATGAAACATGAATTTTCTAGTTTTGTTCATCTTTGAGAGGGCTATGATTCTTCTTGCATAAATGTCGGCCTTTGAAATAAATGGTTTGATCCCGGTGCTGCATTTACCCCTTTTCTTTACTGTATATATTGTATTTACAAGTTTTCTTTGGGTTTTTTTCTTTCATGTGGATGAATATCAGAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATTATTCTGTAA

mRNA sequence

ATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTAATGCTACTTGTGTTCCTTTGGGCAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATTATTCTGTAA

Coding sequence (CDS)

ATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTAATGCTACTTGTGTTCCTTTGGGCAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATTATTCTGTAA

Protein sequence

MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL*

Homology

[Close]

BLAST of CsGy7G007880 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-20
Identity = 52/81 (64.20%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDP 60
          M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 60

Query: 61 AKTPPNATCVPLGNWFCLLLA 80
          +K  P         W C + A
Sbjct: 61 SKPQPK-------KWLCCMQA 74

[Close]

BLAST of CsGy7G007880 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-06
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 3   DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAH 52
           +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G       +   H
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTH 191

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: KAE8645904.1 (hypothetical protein Csa_011859 [Cucumis sativus])

HSP 1 Score: 232 bits (592), Expect = 6.20e-77
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 3   DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 62
           DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP
Sbjct: 2   DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61

Query: 63  PNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 114
           PNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL
Sbjct: 62  PNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 113

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: XP_004148923.1 (protein NOI4 [Cucumis sativus])

HSP 1 Score: 138 bits (348), Expect = 3.32e-40
Identity = 65/77 (84.42%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60

Query: 61 TPPNATCVPLGNWFCLL 77
          TPP         W C +
Sbjct: 61 TPPK-------KWLCCI 70

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: XP_008463015.1 (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 134 bits (337), Expect = 1.58e-38
Identity = 63/77 (81.82%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPPNATCVPLGNWFCLL 77
           PP         W C +
Sbjct: 61 APPK-------KWLCCI 70

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: KAA0048284.1 (RPM1-interacting protein 4-like isoform X2 [Cucumis melo var. makuwa] >TYK07977.1 RPM1-interacting protein 4-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 133 bits (334), Expect = 5.54e-38
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPP 63
           PP
Sbjct: 61 APP 63

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: XP_008463014.1 (PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 133 bits (334), Expect = 6.23e-38
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPP 63
           PP
Sbjct: 61 APP 63

[Close]

BLAST of CsGy7G007880 vs. ExPASy TrEMBL
Match: A0A0A0K6Y6 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G127370 PE=4 SV=1)

HSP 1 Score: 236 bits (603), Expect = 6.51e-79
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
           MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK
Sbjct: 1   MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60

Query: 61  TPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 114
           TPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL
Sbjct: 61  TPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 114

[Close]

BLAST of CsGy7G007880 vs. ExPASy TrEMBL
Match: A0A1S3CI91 (RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 7.64e-39
Identity = 63/77 (81.82%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPPNATCVPLGNWFCLL 77
           PP         W C +
Sbjct: 61 APPK-------KWLCCI 70

[Close]

BLAST of CsGy7G007880 vs. ExPASy TrEMBL
Match: A0A5A7TZ14 (RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001080 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 2.68e-38
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPP 63
           PP
Sbjct: 61 APP 63

[Close]

BLAST of CsGy7G007880 vs. ExPASy TrEMBL
Match: A0A1S3CI83 (RPM1-interacting protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 3.01e-38
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPP 63
           PP
Sbjct: 61 APP 63

[Close]

BLAST of CsGy7G007880 vs. ExPASy TrEMBL
Match: A0A6J1ID15 (uncharacterized protein LOC111474733 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474733 PE=4 SV=1)

HSP 1 Score: 127 bits (318), Expect = 5.99e-36
Identity = 60/77 (77.92%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAK 60

Query: 61 TPPNATCVPLGNWFCLL 77
           PP         W C +
Sbjct: 61 APPK-------KWLCCI 70

[Close]

BLAST of CsGy7G007880 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 98.6 bits (244), Expect = 3.5e-21
Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDP 60
          M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 60

Query: 61 AKTPP 64
          +K  P
Sbjct: 61 SKPQP 65

[Close]

BLAST of CsGy7G007880 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 97.8 bits (242), Expect = 5.9e-21
Identity = 51/79 (64.56%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAK 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 63 TPPNATCVPLGNWFCLLLA 80
            P         W C + A
Sbjct: 79 PQPK-------KWLCCMQA 90

[Close]

BLAST of CsGy7G007880 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-20
Identity = 48/63 (76.19%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAK 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 63 TPP 64
            P
Sbjct: 79 PQP 81

[Close]

BLAST of CsGy7G007880 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 94.0 bits (232), Expect = 8.6e-20
Identity = 50/79 (63.29%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK D  G N      
Sbjct: 1  MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGK-DEPGYNKNGEVL 60

Query: 61 TPPNATCVPLGNWFCLLLA 80
                  P   WFC + A
Sbjct: 61 EK------PAKKWFCCIRA 72

[Close]

BLAST of CsGy7G007880 vs. TAIR 10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 68.6 bits (166), Expect = 3.9e-12
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 6  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 61
          RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT     +  +   + ++  +P K
Sbjct: 13 RPLPKFGEWDVNDPASAEGFTVIFAKARDDKKTNASGRAASQRRDNNKSQDEPTK 67

The following BLAST results are available for this feature:

BLAST of CsGy7G007880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	1.3e-20	64.20	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	4.0e-06	42.86	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of CsGy7G007880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645904.1	6.20e-77	100.00	hypothetical protein Csa_011859 [Cucumis sativus]	[more]
XP_004148923.1	3.32e-40	84.42	protein NOI4 [Cucumis sativus]	[more]
XP_008463015.1	1.58e-38	81.82	PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]	[more]
KAA0048284.1	5.54e-38	96.83	RPM1-interacting protein 4-like isoform X2 [Cucumis melo var. makuwa] >TYK07977....	[more]
XP_008463014.1	6.23e-38	96.83	PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo]	[more]

BLAST of CsGy7G007880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6Y6	6.51e-79	100.00	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G12...	[more]
A0A1S3CI91	7.64e-39	81.82	RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035012...	[more]
A0A5A7TZ14	2.68e-38	96.83	RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CI83	3.01e-38	96.83	RPM1-interacting protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035012...	[more]
A0A6J1ID15	5.99e-36	77.92	uncharacterized protein LOC111474733 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy7G007880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55850.1	3.5e-21	75.38	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	5.9e-21	64.56	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	2.3e-20	76.19	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	8.6e-20	63.29	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	3.9e-12	58.18	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 3..38 e-value: 2.0E-22 score: 78.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR33159:SF59	RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE SITE-RELATED	coord: 3..78
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 3..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G007880.1	CsGy7G007880.1	mRNA