CsGy7G004270 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G004270
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	BHLH domain-containing protein
Location	Gy14Chr7: 3190013 .. 3190798 (+)
RNA-Seq Expression	CsGy7G004270
Synteny	CsGy7G004270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCAATTTTCAGTTCTCCGCTTCATCCTCCACCGCCGCCAAGATCGAACGCCGAATCATAGAAAAAAACCGAAGAAATCAAATGAAAAACCTCTGTGATCAACTCAAGTCCCTCGTCCCACAACAAGATTCAAAGGTCCTTTCTAGCTCATTCCCAACCGTTGAACAAAATATTCTCTGTTTTTATACTCTCTGTTTTTAATGCAGGAGGTTTCATTGGCATTGCCCGATCAGATTGATGTAGCAATTAAGTACATAAAAGACCTGGAGAAGAGAGTGAATTCAGCTAAAGAAAAGAAAAATCGATTGCAAGGGAAAAATAAAAGCGCCATAAACATGGATTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTCCTCAGCTTAAAATAAACCAAATGGGTAAAAGTTTAGAGATAATATTAAGCAGTGGAAATGATAACCAGTATCTGTTATGTGAAACCCTTCGGATTCTTGAAGAAGAAGGCACTGAAGTTGTGAGTGCAAGCTTCTCTGTTTCTGGGAACTCTGTTTTCCACACCATCCATGCACAAGTAATAATCTTACAAGAGTTTGATATAGTAAATGACATTATATTTTATTTATGATGGTAACGATGGAGTTTTGATGGTGCAGCTTGGTGATTCGATGGTCGAATTTGGGATGACGAAAGCGACGGAGAGATTGACGAGATTGGTTTACAGGTCGAACAGCGATGTTGAATTGCAGAAGGAGGAGAAGCAATGGTGGAAGGAATTTCCATCTGAGAATTGGGAGTTTTAA

mRNA sequence

ATGGATCCCAATTTTCAGTTCTCCGCTTCATCCTCCACCGCCGCCAAGATCGAACGCCGAATCATAGAAAAAAACCGAAGAAATCAAATGAAAAACCTCTGTGATCAACTCAAGTCCCTCGTCCCACAACAAGATTCAAAGGAGGTTTCATTGGCATTGCCCGATCAGATTGATGTAGCAATTAAGTACATAAAAGACCTGGAGAAGAGAGTGAATTCAGCTAAAGAAAAGAAAAATCGATTGCAAGGGAAAAATAAAAGCGCCATAAACATGGATTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTCCTCAGCTTAAAATAAACCAAATGGGTAAAAGTTTAGAGATAATATTAAGCAGTGGAAATGATAACCAGTATCTGTTATGTGAAACCCTTCGGATTCTTGAAGAAGAAGGCACTGAAGTTGTGAGTGCAAGCTTCTCTGTTTCTGGGAACTCTGTTTTCCACACCATCCATGCACAACTTGGTGATTCGATGGTCGAATTTGGGATGACGAAAGCGACGGAGAGATTGACGAGATTGGTTTACAGGTCGAACAGCGATGTTGAATTGCAGAAGGAGGAGAAGCAATGGTGGAAGGAATTTCCATCTGAGAATTGGGAGTTTTAA

Coding sequence (CDS)

ATGGATCCCAATTTTCAGTTCTCCGCTTCATCCTCCACCGCCGCCAAGATCGAACGCCGAATCATAGAAAAAAACCGAAGAAATCAAATGAAAAACCTCTGTGATCAACTCAAGTCCCTCGTCCCACAACAAGATTCAAAGGAGGTTTCATTGGCATTGCCCGATCAGATTGATGTAGCAATTAAGTACATAAAAGACCTGGAGAAGAGAGTGAATTCAGCTAAAGAAAAGAAAAATCGATTGCAAGGGAAAAATAAAAGCGCCATAAACATGGATTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTCCTCAGCTTAAAATAAACCAAATGGGTAAAAGTTTAGAGATAATATTAAGCAGTGGAAATGATAACCAGTATCTGTTATGTGAAACCCTTCGGATTCTTGAAGAAGAAGGCACTGAAGTTGTGAGTGCAAGCTTCTCTGTTTCTGGGAACTCTGTTTTCCACACCATCCATGCACAACTTGGTGATTCGATGGTCGAATTTGGGATGACGAAAGCGACGGAGAGATTGACGAGATTGGTTTACAGGTCGAACAGCGATGTTGAATTGCAGAAGGAGGAGAAGCAATGGTGGAAGGAATTTCCATCTGAGAATTGGGAGTTTTAA

Protein sequence

MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILSSGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRLVYRSNSDVELQKEEKQWWKEFPSENWEF*

Homology

[Close]

BLAST of CsGy7G004270 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.1e-17
Identity = 63/184 (34.24%), Postives = 106/184 (57.61%), Query Frame = 0


Query: 9   ASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIKYIKDLE 68
           +++  +  ++R+ +EKNRR QMK+L  +L SL+P   S E  L LPDQ+D A  YIK L+
Sbjct: 6   SNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQ 65

Query: 69  KRVNSAKEKKNRLQGKNK-SAINMDSSSSSSSS------SSSPQLKINQMGKSLEIILSS 128
             V   +E+K  L        +N   SSS SSS         P+++I + G    I L +
Sbjct: 66  VNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVT 125

Query: 129 GNDNQYLLCETLRILEEE-GTEVVSASFSVSGNSVFHTIHAQLGDSMVEFG-MTKATERL 184
             +++++ CE +R+L EE G E+  A +S+  ++VFHT+H ++ +   ++G  ++  ERL
Sbjct: 126 SLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEH--DYGARSQIPERL 185

[Close]

BLAST of CsGy7G004270 vs. ExPASy Swiss-Prot
Match: F4I4E1 (Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.3e-06
Identity = 51/180 (28.33%), Postives = 89/180 (49.44%), Query Frame = 0


Query: 6   QFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIKYIK 65
           +    +S++ + +R + EK+RR +MK+L   L S V    S    L +P  ID A  Y+ 
Sbjct: 6   EIGEGNSSSLREQRNLREKDRRMRMKHLFSILSSHV----SPTRKLPVPHLIDQATSYMI 65

Query: 66  DLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEI-ILSSGND 125
            L++ VN  KEKK  L       +  +  +    S   P+L I     ++E+ ++   N 
Sbjct: 66  QLKENVNYLKEKKRTL-------LQGELGNLYEGSFLLPKLSIRSRDSTIEMNLIMDLNM 125

Query: 126 NQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRLVY 185
            + +L E + I EEEG +V+SA+     +   +TI AQ   S +    ++  ER+ +++Y
Sbjct: 126 KRVMLHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKIIY 174

[Close]

BLAST of CsGy7G004270 vs. ExPASy Swiss-Prot
Match: Q0JFZ0 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. japonica OX=39947 GN=IRO2 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.3e-06
Identity = 49/182 (26.92%), Postives = 85/182 (46.70%), Query Frame = 0


Query: 8   SASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIKYIKDL 67
           S  S +  K+     E++RR Q+  L   L++L+P  D+    L++P  +   +KYI +L
Sbjct: 62  SGGSGSHRKLSHNAYERDRRKQLNELYSSLRALLP--DADHTKLSIPTTVSRVLKYIPEL 121

Query: 68  EKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLK----INQMGKSLEIILSSGN 127
           +K+V + + KK  L   + +        S   S     +     IN M   +++ L S  
Sbjct: 122 QKQVENLERKKKELTTTSTTNCKPGVLGSQLMSEGMAPIVSATCINDMEIMVQVSLLSNV 181

Query: 128 DNQYL-LCETLRILEEEGTEVVSASFSVS-GNSVFHTIHAQLGDSMVEFGMTKATERLTR 184
               L L + +++LE EG   +S+S S   GN  F++IH Q  +  +        ERL +
Sbjct: 182 AGSVLPLSKCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQRSEGTINEECPAFCERLEK 241

[Close]

BLAST of CsGy7G004270 vs. ExPASy Swiss-Prot
Match: Q9XIJ1 (Transcription factor bHLH168 OS=Arabidopsis thaliana OX=3702 GN=BHLH168 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.6e-06
Identity = 50/179 (27.93%), Postives = 88/179 (49.16%), Query Frame = 0


Query: 6   QFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIKYIK 65
           +    S+++ + +R + EK RR +MK+L   L S V    S    L +P  ID A+ Y+ 
Sbjct: 6   EIGEGSASSLREQRNLREKERRMRMKHLFSILSSHV----SPTRRLPVPQLIDQAVSYMI 65

Query: 66  DLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEI-ILSSGND 125
            L+++VN   E K R+ G        +  + S  SS  P+L I  +   +E+ ++   N 
Sbjct: 66  QLKEKVNYLNEMKRRMLGG-------EVKNRSEGSSLLPKLSIRSLDSIIEMNLVMDLNM 125

Query: 126 NQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRLV 184
              +L + + + EEEG +V+SA+     +  F+TI AQ     +    ++  ERL  ++
Sbjct: 126 KGVMLHKLVSVFEEEGAQVMSANLQNLNDRTFYTIIAQAIICRIGIDPSRIEERLRDII 173

[Close]

BLAST of CsGy7G004270 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.6e-06
Identity = 49/182 (26.92%), Postives = 85/182 (46.70%), Query Frame = 0


Query: 8   SASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIKYIKDL 67
           S  S +  K+     E++RR Q+  L   L++L+P  D  +  L++P  +   +KYI +L
Sbjct: 62  SGGSGSHRKLSHNAYERDRRKQLNELYSSLRALLPDADHTK-KLSIPTTVSRVLKYIPEL 121

Query: 68  EKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLK----INQMGKSLEIILSSGN 127
           +K+V + + KK  L   + +        S   S     +     IN M   +++ L S  
Sbjct: 122 QKQVENLERKKKELTTTSTTNCKPGVLGSQLMSEGMAPIVSATCINDMEIMVQVSLLSNV 181

Query: 128 DNQYL-LCETLRILEEEGTEVVSASFSVS-GNSVFHTIHAQLGDSMVEFGMTKATERLTR 184
               L L + +++LE EG   +S+S S   GN  F++IH Q  +  +        ERL +
Sbjct: 182 AGSVLPLSKCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQRSEGTINEECPAFCERLEK 241

[Close]

BLAST of CsGy7G004270 vs. NCBI nr
Match: XP_011659708.1 (transcription factor bHLH162 [Cucumis sativus] >KGN43623.1 hypothetical protein Csa_020395 [Cucumis sativus])

HSP 1 Score: 393 bits (1010), Expect = 1.61e-137
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60
           MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA
Sbjct: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60

Query: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120
           IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS
Sbjct: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120

Query: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180
           SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT
Sbjct: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180

Query: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWEF 210
           RLVYRSNSDVELQKEEKQWWKEFPSENWEF
Sbjct: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWEF 210

[Close]

BLAST of CsGy7G004270 vs. NCBI nr
Match: KAA0031567.1 (transcription factor bHLH55-like [Cucumis melo var. makuwa] >TYK07018.1 transcription factor bHLH55-like [Cucumis melo var. makuwa])

HSP 1 Score: 349 bits (895), Expect = 4.37e-120
Identity = 190/209 (90.91%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60
           MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA
Sbjct: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60

Query: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120
           IKYIKDLEK+VNSAKEKKNRLQGKNKSAINMDSSSSSS     PQLKINQMGKSLEI+LS
Sbjct: 61  IKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSS-----PQLKINQMGKSLEIVLS 120

Query: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180
           SG DNQYLLCETLRIL+EEG EVV+ASFSVSG SVFHTIHA+LGDSMVEFG TKATERL 
Sbjct: 121 SGIDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLK 180

Query: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWE 209
           RLVY SNSDVELQKE KQWW EFPSENW+
Sbjct: 181 RLVYGSNSDVELQKE-KQWWDEFPSENWD 203

[Close]

BLAST of CsGy7G004270 vs. NCBI nr
Match: XP_008455310.1 (PREDICTED: transcription factor bHLH55-like [Cucumis melo])

HSP 1 Score: 342 bits (877), Expect = 2.50e-117
Identity = 187/207 (90.34%), Postives = 194/207 (93.72%), Query Frame = 0


Query: 3   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIK 62
           PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQ SKEVSLALPDQIDVAIK
Sbjct: 4   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIK 63

Query: 63  YIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILSSG 122
           YIKDLEK+VNSAKEKKNRLQGKNKSAINMDSSSSSS     PQLKINQMGKSLEI+LSSG
Sbjct: 64  YIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSS-----PQLKINQMGKSLEIVLSSG 123

Query: 123 NDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRL 182
            DNQYLLCETLRIL+EEG EVV+ASFSVSG SVFHTIHA+LGDSMVEFG TKATERL RL
Sbjct: 124 IDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 183

Query: 183 VYRSNSDVELQKEEKQWWKEFPSENWE 209
           VY SNSDVELQKE KQWW+EFPSENW+
Sbjct: 184 VYGSNSDVELQKE-KQWWEEFPSENWD 204

[Close]

BLAST of CsGy7G004270 vs. NCBI nr
Match: XP_038888628.1 (transcription factor bHLH162-like [Benincasa hispida])

HSP 1 Score: 326 bits (836), Expect = 4.73e-111
Identity = 174/209 (83.25%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60
           MDPNFQFSASSS+AAKIERRIIEKNRRNQMKNLC QL SL+P  DSK++SL LPDQID A
Sbjct: 1   MDPNFQFSASSSSAAKIERRIIEKNRRNQMKNLCSQLNSLLPNHDSKDISLPLPDQIDEA 60

Query: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120
           IKYIK+LEK+V+SAKEKKN+LQGKNKS+INMDSSSSSSS+S  PQL I+QMGKS+EI+LS
Sbjct: 61  IKYIKELEKKVSSAKEKKNQLQGKNKSSINMDSSSSSSSAS--PQLNIHQMGKSVEIVLS 120

Query: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180
           SG DNQYL CETLRIL+EEGTEV++ASFSVSGNSVFHTIHAQLGDSMVEFG+TKATERL 
Sbjct: 121 SGLDNQYLFCETLRILQEEGTEVINASFSVSGNSVFHTIHAQLGDSMVEFGVTKATERLK 180

Query: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWE 209
           RLVY SNSDVE+QKE KQWW EFP ENW+
Sbjct: 181 RLVYGSNSDVEVQKE-KQWWDEFPCENWD 206

[Close]

BLAST of CsGy7G004270 vs. NCBI nr
Match: XP_022930718.1 (transcription factor bHLH162-like [Cucurbita moschata])

HSP 1 Score: 287 bits (735), Expect = 6.37e-95
Identity = 155/210 (73.81%), Postives = 182/210 (86.67%), Query Frame = 0


Query: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60
           MD +FQFS SSS+AAKIERRI+EKNRRNQMK LC QL SL+P QDSKE+SLALPDQID A
Sbjct: 50  MDRHFQFSTSSSSAAKIERRIVEKNRRNQMKTLCSQLNSLLPNQDSKEISLALPDQIDEA 109

Query: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120
           +KYIK+LEK+VN AKEKK +L+GKNKS++N++SSSSSSSSS+SPQLKI+Q G+SLEIILS
Sbjct: 110 VKYIKELEKKVNLAKEKKEKLEGKNKSSMNIESSSSSSSSSASPQLKIHQSGRSLEIILS 169

Query: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180
           SG DNQYL  ET+ IL+EEG EVV+ASFSVSG+SVF T HAQL  SM+EF   K TERL 
Sbjct: 170 SGLDNQYLFSETISILQEEGVEVVNASFSVSGSSVFQTFHAQLEGSMIEFEAAKVTERLK 229

Query: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWEF 210
           RLVY SNSD+ELQKE KQWW EFPS++ ++
Sbjct: 230 RLVYGSNSDMELQKE-KQWWDEFPSDDLDY 258

[Close]

BLAST of CsGy7G004270 vs. ExPASy TrEMBL
Match: A0A0A0K2C9 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G048070 PE=4 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 7.77e-138
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60
           MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA
Sbjct: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60

Query: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120
           IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS
Sbjct: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120

Query: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180
           SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT
Sbjct: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180

Query: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWEF 210
           RLVYRSNSDVELQKEEKQWWKEFPSENWEF
Sbjct: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWEF 210

[Close]

BLAST of CsGy7G004270 vs. ExPASy TrEMBL
Match: A0A5D3C788 (Transcription factor bHLH55-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003340 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 2.12e-120
Identity = 190/209 (90.91%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60
           MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA
Sbjct: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60

Query: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120
           IKYIKDLEK+VNSAKEKKNRLQGKNKSAINMDSSSSSS     PQLKINQMGKSLEI+LS
Sbjct: 61  IKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSS-----PQLKINQMGKSLEIVLS 120

Query: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180
           SG DNQYLLCETLRIL+EEG EVV+ASFSVSG SVFHTIHA+LGDSMVEFG TKATERL 
Sbjct: 121 SGIDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLK 180

Query: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWE 209
           RLVY SNSDVELQKE KQWW EFPSENW+
Sbjct: 181 RLVYGSNSDVELQKE-KQWWDEFPSENWD 203

[Close]

BLAST of CsGy7G004270 vs. ExPASy TrEMBL
Match: A0A1S3C1C4 (transcription factor bHLH55-like OS=Cucumis melo OX=3656 GN=LOC103495505 PE=4 SV=1)

HSP 1 Score: 342 bits (877), Expect = 1.21e-117
Identity = 187/207 (90.34%), Postives = 194/207 (93.72%), Query Frame = 0


Query: 3   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIK 62
           PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQ SKEVSLALPDQIDVAIK
Sbjct: 4   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIK 63

Query: 63  YIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILSSG 122
           YIKDLEK+VNSAKEKKNRLQGKNKSAINMDSSSSSS     PQLKINQMGKSLEI+LSSG
Sbjct: 64  YIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSS-----PQLKINQMGKSLEIVLSSG 123

Query: 123 NDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRL 182
            DNQYLLCETLRIL+EEG EVV+ASFSVSG SVFHTIHA+LGDSMVEFG TKATERL RL
Sbjct: 124 IDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 183

Query: 183 VYRSNSDVELQKEEKQWWKEFPSENWE 209
           VY SNSDVELQKE KQWW+EFPSENW+
Sbjct: 184 VYGSNSDVELQKE-KQWWEEFPSENWD 204

[Close]

BLAST of CsGy7G004270 vs. ExPASy TrEMBL
Match: A0A6J1EW58 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111437113 PE=4 SV=1)

HSP 1 Score: 287 bits (735), Expect = 3.08e-95
Identity = 155/210 (73.81%), Postives = 182/210 (86.67%), Query Frame = 0


Query: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60
           MD +FQFS SSS+AAKIERRI+EKNRRNQMK LC QL SL+P QDSKE+SLALPDQID A
Sbjct: 50  MDRHFQFSTSSSSAAKIERRIVEKNRRNQMKTLCSQLNSLLPNQDSKEISLALPDQIDEA 109

Query: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120
           +KYIK+LEK+VN AKEKK +L+GKNKS++N++SSSSSSSSS+SPQLKI+Q G+SLEIILS
Sbjct: 110 VKYIKELEKKVNLAKEKKEKLEGKNKSSMNIESSSSSSSSSASPQLKIHQSGRSLEIILS 169

Query: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180
           SG DNQYL  ET+ IL+EEG EVV+ASFSVSG+SVF T HAQL  SM+EF   K TERL 
Sbjct: 170 SGLDNQYLFSETISILQEEGVEVVNASFSVSGSSVFQTFHAQLEGSMIEFEAAKVTERLK 229

Query: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWEF 210
           RLVY SNSD+ELQKE KQWW EFPS++ ++
Sbjct: 230 RLVYGSNSDMELQKE-KQWWDEFPSDDLDY 258

[Close]

BLAST of CsGy7G004270 vs. ExPASy TrEMBL
Match: A0A6J1JEF7 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111486157 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 6.43e-90
Identity = 149/210 (70.95%), Postives = 177/210 (84.29%), Query Frame = 0


Query: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60
           MD +FQFS SSS+AAKIERRIIEKNRRNQMK LC QL SL+P QDSKE+SL+LPDQID A
Sbjct: 1   MDRHFQFSTSSSSAAKIERRIIEKNRRNQMKTLCSQLNSLLPNQDSKEISLSLPDQIDEA 60

Query: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120
           +KYIK+LEK+VN AKEKK +L+GKNKS +N++SSSS S+S   PQLKI+Q G+SLEIILS
Sbjct: 61  VKYIKELEKKVNLAKEKKEKLEGKNKSPMNIESSSSCSAS---PQLKIHQSGRSLEIILS 120

Query: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180
           SG DNQYL  ET+ IL++EG EVV+ASFSVSG+SVF T HAQL  S++EF   K TERL 
Sbjct: 121 SGLDNQYLFSETISILQKEGVEVVNASFSVSGSSVFQTFHAQLEGSIIEFEAAKVTERLK 180

Query: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWEF 210
           RLVY SNSD+ELQKE KQWW EFPS++ ++
Sbjct: 181 RLVYGSNSDMELQKE-KQWWDEFPSDDLDY 206

[Close]

BLAST of CsGy7G004270 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 5.1e-18
Identity = 63/184 (34.24%), Postives = 106/184 (57.61%), Query Frame = 0


Query: 9   ASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIKYIKDLE 68
           +++  +  ++R+ +EKNRR QMK+L  +L SL+P   S E  L LPDQ+D A  YIK L+
Sbjct: 6   SNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQ 65

Query: 69  KRVNSAKEKKNRLQGKNK-SAINMDSSSSSSSS------SSSPQLKINQMGKSLEIILSS 128
             V   +E+K  L        +N   SSS SSS         P+++I + G    I L +
Sbjct: 66  VNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVT 125

Query: 129 GNDNQYLLCETLRILEEE-GTEVVSASFSVSGNSVFHTIHAQLGDSMVEFG-MTKATERL 184
             +++++ CE +R+L EE G E+  A +S+  ++VFHT+H ++ +   ++G  ++  ERL
Sbjct: 126 SLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEH--DYGARSQIPERL 185

[Close]

BLAST of CsGy7G004270 vs. TAIR 10
Match: AT1G10585.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07
Identity = 51/180 (28.33%), Postives = 89/180 (49.44%), Query Frame = 0


Query: 6   QFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIKYIK 65
           +    +S++ + +R + EK+RR +MK+L   L S V    S    L +P  ID A  Y+ 
Sbjct: 6   EIGEGNSSSLREQRNLREKDRRMRMKHLFSILSSHV----SPTRKLPVPHLIDQATSYMI 65

Query: 66  DLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEI-ILSSGND 125
            L++ VN  KEKK  L       +  +  +    S   P+L I     ++E+ ++   N 
Sbjct: 66  QLKENVNYLKEKKRTL-------LQGELGNLYEGSFLLPKLSIRSRDSTIEMNLIMDLNM 125

Query: 126 NQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRLVY 185
            + +L E + I EEEG +V+SA+     +   +TI AQ   S +    ++  ER+ +++Y
Sbjct: 126 KRVMLHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKIIY 174

[Close]

BLAST of CsGy7G004270 vs. TAIR 10
Match: AT1G10586.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 4.0e-07
Identity = 50/179 (27.93%), Postives = 88/179 (49.16%), Query Frame = 0


Query: 6   QFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIKYIK 65
           +    S+++ + +R + EK RR +MK+L   L S V    S    L +P  ID A+ Y+ 
Sbjct: 6   EIGEGSASSLREQRNLREKERRMRMKHLFSILSSHV----SPTRRLPVPQLIDQAVSYMI 65

Query: 66  DLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEI-ILSSGND 125
            L+++VN   E K R+ G        +  + S  SS  P+L I  +   +E+ ++   N 
Sbjct: 66  QLKEKVNYLNEMKRRMLGG-------EVKNRSEGSSLLPKLSIRSLDSIIEMNLVMDLNM 125

Query: 126 NQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRLV 184
              +L + + + EEEG +V+SA+     +  F+TI AQ     +    ++  ERL  ++
Sbjct: 126 KGVMLHKLVSVFEEEGAQVMSANLQNLNDRTFYTIIAQAIICRIGIDPSRIEERLRDII 173

[Close]

BLAST of CsGy7G004270 vs. TAIR 10
Match: AT1G10586.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.2e-04
Identity = 37/134 (27.61%), Postives = 66/134 (49.25%), Query Frame = 0


Query: 51  LALPDQIDVAIKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQ 110
           L +P  ID A+ Y+  L+++VN   E K R+ G        +  + S  SS  P+L I  
Sbjct: 6   LPVPQLIDQAVSYMIQLKEKVNYLNEMKRRMLGG-------EVKNRSEGSSLLPKLSIRS 65

Query: 111 MGKSLEI-ILSSGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVE 170
           +   +E+ ++   N    +L + + + EEEG +V+SA+     +  F+TI AQ     + 
Sbjct: 66  LDSIIEMNLVMDLNMKGVMLHKLVSVFEEEGAQVMSANLQNLNDRTFYTIIAQAIICRIG 125

Query: 171 FGMTKATERLTRLV 184
              ++  ERL  ++
Sbjct: 126 IDPSRIEERLRDII 132

The following BLAST results are available for this feature:

BLAST of CsGy7G004270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JIJ7	7.1e-17	34.24	Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=...	[more]
F4I4E1	3.3e-06	28.33	Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=...	[more]
Q0JFZ0	3.3e-06	26.92	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9XIJ1	5.6e-06	27.93	Transcription factor bHLH168 OS=Arabidopsis thaliana OX=3702 GN=BHLH168 PE=3 SV=...	[more]
A2WZ60	5.6e-06	26.92	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=399...	[more]

BLAST of CsGy7G004270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659708.1	1.61e-137	100.00	transcription factor bHLH162 [Cucumis sativus] >KGN43623.1 hypothetical protein ...	[more]
KAA0031567.1	4.37e-120	90.91	transcription factor bHLH55-like [Cucumis melo var. makuwa] >TYK07018.1 transcri...	[more]
XP_008455310.1	2.50e-117	90.34	PREDICTED: transcription factor bHLH55-like [Cucumis melo]	[more]
XP_038888628.1	4.73e-111	83.25	transcription factor bHLH162-like [Benincasa hispida]	[more]
XP_022930718.1	6.37e-95	73.81	transcription factor bHLH162-like [Cucurbita moschata]	[more]

BLAST of CsGy7G004270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2C9	7.77e-138	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G048070 PE=4 S...	[more]
A0A5D3C788	2.12e-120	90.91	Transcription factor bHLH55-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C1C4	1.21e-117	90.34	transcription factor bHLH55-like OS=Cucumis melo OX=3656 GN=LOC103495505 PE=4 SV...	[more]
A0A6J1EW58	3.08e-95	73.81	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111437113 ...	[more]
A0A6J1JEF7	6.43e-90	70.95	transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111486157 PE...	[more]

BLAST of CsGy7G004270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20970.1	5.1e-18	34.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10585.1	2.4e-07	28.33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10586.1	4.0e-07	27.93	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10586.2	3.2e-04	27.61	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..106
None	No IPR available	PANTHER	PTHR13935:SF63	HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN	coord: 10..190
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 6..94 e-value: 2.4E-9 score: 39.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 16..86
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 18..68 e-value: 8.0E-7 score: 29.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 14..67 score: 11.610641
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 10..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G004270.1	CsGy7G004270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity